Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 MIR183-201ENST00000384958 110 ntBASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 MIR520G-201ENST00000385064 90 ntBASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 MIR34B-201ENST00000385076 84 ntBASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 SNORA75.5-201ENST00000391291 81 ntBASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 RNU2-55P-201ENST00000411146 174 ntBASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 AC104389.3-201ENST00000445629 235 ntBASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 Z96811.1-201ENST00000445880 108 ntBASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 AC023449.1-201ENST00000454464 154 ntBASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 RNU6-1211P-201ENST00000459179 105 ntBASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 AP004217.1-201ENST00000480579 346 ntBASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 YWHAEP4-201ENST00000505390 198 ntBASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 SNORD77.4-201ENST00000516158 81 ntBASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 RNU6-479P-201ENST00000516348 105 ntBASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 AL359075.3-201ENST00000613288 217 ntBASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 U6.105-201ENST00000637379 88 ntBASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 U6.108-201ENST00000637764 58 ntBASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SF3B6Q9Y3B4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 SNORA63.1-201ENST00000362493 131 ntBASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 Y_RNA.91-201ENST00000363042 107 ntBASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 Y_RNA.218-201ENST00000364218 104 ntBASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 RNU6-160P-201ENST00000384591 107 ntBASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 MIR181B1-201ENST00000385240 110 ntBASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 RNU6-1168P-201ENST00000390831 104 ntBASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 TRIAP1P1-201ENST00000427062 225 ntBASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 ATP5J2P3-201ENST00000451550 258 ntBASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 RNA5SP385-201ENST00000515947 110 ntBASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 AC091178.2-201ENST00000584401 117 ntBASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 JPX_2.1-201ENST00000614161 69 ntBASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 U4atac.1-201ENST00000618345 95 ntBASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 MIR7975-201ENST00000619350 68 ntBASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
SF3B6Q9Y3B4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 RNU6-1290P-201ENST00000362957 109 ntBASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 RNU6-597P-201ENST00000365620 102 ntBASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 MIR562-201ENST00000384894 95 ntBASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 RNU2-70P-201ENST00000410718 179 ntBASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 AC092427.1-202ENST00000430569 476 ntBASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 RNU1-131P-201ENST00000458943 161 ntBASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 RN7SL807P-201ENST00000470923 297 ntBASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 RNU7-149P-201ENST00000516739 59 ntBASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 RNU6-1234P-201ENST00000516877 103 ntBASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 MIR2682-201ENST00000580305 110 ntBASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 AL353149.1-201ENST00000610667 244 ntBASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 Z83843.1-201ENST00000604070 3685 ntBASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.79□□□□□ -1.96
SF3B6Q9Y3B4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SF3B6Q9Y3B4 AC092435.3-201ENST00000565538 3654 ntBASIC2.78□□□□□ -1.96
SF3B6Q9Y3B4 RNU1-33P-201ENST00000364249 162 ntBASIC2.78□□□□□ -1.96
SF3B6Q9Y3B4 RNU6-978P-201ENST00000364371 103 ntBASIC2.78□□□□□ -1.96
SF3B6Q9Y3B4 Y_RNA.251-201ENST00000364551 99 ntBASIC2.78□□□□□ -1.96
SF3B6Q9Y3B4 Y_RNA.261-201ENST00000364631 102 ntBASIC2.78□□□□□ -1.96
SF3B6Q9Y3B4 Y_RNA.267-201ENST00000364679 109 ntBASIC2.78□□□□□ -1.96
SF3B6Q9Y3B4 RNA5SP323-201ENST00000391094 133 ntBASIC2.78□□□□□ -1.96
SF3B6Q9Y3B4 AL117342.1-201ENST00000404861 406 ntBASIC2.78□□□□□ -1.96
SF3B6Q9Y3B4 RNA5SP344-201ENST00000411081 104 ntBASIC2.78□□□□□ -1.96
SF3B6Q9Y3B4 RNA5SP76-201ENST00000516277 87 ntBASIC2.78□□□□□ -1.96
SF3B6Q9Y3B4 RNU1-142P-201ENST00000516682 145 ntBASIC2.78□□□□□ -1.96
SF3B6Q9Y3B4 RNU2-56P-201ENST00000516826 190 ntBASIC2.78□□□□□ -1.96
SF3B6Q9Y3B4 uc_338.25-201ENST00000613756 156 ntBASIC2.78□□□□□ -1.96
SF3B6Q9Y3B4 MIR6079-201ENST00000635807 62 ntBASIC2.78□□□□□ -1.96
SF3B6Q9Y3B4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.78□□□□□ -1.96
SF3B6Q9Y3B4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.97
SF3B6Q9Y3B4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.97
SF3B6Q9Y3B4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
SF3B6Q9Y3B4 Y_RNA.71-201ENST00000362892 104 ntBASIC2.77□□□□□ -1.97
SF3B6Q9Y3B4 SNORD115-3-201ENST00000363100 82 ntBASIC2.77□□□□□ -1.97
SF3B6Q9Y3B4 RNA5SP493-201ENST00000364115 91 ntBASIC2.77□□□□□ -1.97
SF3B6Q9Y3B4 SNORD46.1-201ENST00000364139 104 ntBASIC2.77□□□□□ -1.97
SF3B6Q9Y3B4 Y_RNA.634-201ENST00000364811 113 ntBASIC2.77□□□□□ -1.97
SF3B6Q9Y3B4 MIR490-201ENST00000384865 128 ntBASIC2.77□□□□□ -1.97
SF3B6Q9Y3B4 RPS29P6-201ENST00000438196 145 ntBASIC2.77□□□□□ -1.97
SF3B6Q9Y3B4 UBBP3-201ENST00000445497 241 ntBASIC2.77□□□□□ -1.97
SF3B6Q9Y3B4 RN7SL20P-201ENST00000488827 297 ntBASIC2.77□□□□□ -1.97
SF3B6Q9Y3B4 AC090142.3-201ENST00000519012 385 ntBASIC2.77□□□□□ -1.97
SF3B6Q9Y3B4 AC011603.4-201ENST00000611325 277 ntBASIC2.77□□□□□ -1.97
SF3B6Q9Y3B4 AC022202.1-201ENST00000613515 211 ntBASIC2.77□□□□□ -1.97
SF3B6Q9Y3B4 Pinc.1-201ENST00000616452 154 ntBASIC2.77□□□□□ -1.97
SF3B6Q9Y3B4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SF3B6Q9Y3B4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SF3B6Q9Y3B4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
SF3B6Q9Y3B4 AC018630.2-201ENST00000534866 2403 ntBASIC2.76□□□□□ -1.97
SF3B6Q9Y3B4 RNU6-862P-201ENST00000362804 105 ntBASIC2.76□□□□□ -1.97
SF3B6Q9Y3B4 Y_RNA.253-201ENST00000364562 112 ntBASIC2.76□□□□□ -1.97
SF3B6Q9Y3B4 SNORA8-201ENST00000384574 139 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms