Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 Y_RNA.380-201ENST00000365663 111 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.459-201ENST00000384251 102 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 RNU6-417P-201ENST00000384712 107 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.570-201ENST00000384750 101 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 AL355796.1-201ENST00000406706 323 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 RNA5SP450-201ENST00000411206 102 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 AL158823.1-201ENST00000418441 478 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 ATP5J2P3-201ENST00000451550 258 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.63□□□□□ -2.15
NDE1Q9NXR1 SNORD65B-201ENST00000459126 73 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 AC098869.1-201ENST00000481627 292 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 RNU6-155P-201ENST00000516347 100 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 SNORA40.15-201ENST00000516884 107 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 RNU7-110P-201ENST00000516891 62 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 MIR4300-201ENST00000581016 96 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 AL355297.3-201ENST00000604082 446 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 MIR376A1-201ENST00000616574 68 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.62□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.64-201ENST00000362845 102 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.124-201ENST00000363339 93 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.286-201ENST00000364813 102 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 SNORA63.7-201ENST00000365579 123 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.446-201ENST00000384178 104 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 SNORA20B-201ENST00000384220 132 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 RNU6-102P-201ENST00000384485 104 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 MIR1253-201ENST00000408273 105 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.602-201ENST00000410535 92 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 RNU6-1199P-201ENST00000411249 104 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 RPL21P38-201ENST00000418090 167 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 AC099677.2-201ENST00000436385 175 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.62□□□□□ -2.15
NDE1Q9NXR1 RNVU1-2-201ENST00000516326 135 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 RNU2-12P-201ENST00000517216 168 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.62□□□□□ -2.15
NDE1Q9NXR1 SUMO2P18-201ENST00000518873 252 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.62□□□□□ -2.15
NDE1Q9NXR1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.62□□□□□ -2.15
NDE1Q9NXR1 AC023157.2-201ENST00000540596 141 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.62□□□□□ -2.15
NDE1Q9NXR1 MIR4285-201ENST00000581001 85 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 U6.115-201ENST00000636045 103 ntBASIC1.62□□□□□ -2.15
NDE1Q9NXR1 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.19-201ENST00000362462 99 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 RNU6-1266P-201ENST00000362794 105 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 snoU2-30.2-201ENST00000362805 70 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 RNU6-238P-201ENST00000363313 106 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.145-201ENST00000363527 102 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.183-201ENST00000363882 113 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.222-201ENST00000364264 102 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.287-201ENST00000364853 94 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 RNU6-1240P-201ENST00000365155 104 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.331-201ENST00000365267 102 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 RNA5SP465-201ENST00000391195 109 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 RPL21P1-201ENST00000399532 476 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 AL117342.1-201ENST00000404861 406 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 RNA5SP501-201ENST00000410990 112 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 AC008134.1-201ENST00000420943 193 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 MTND5P22-201ENST00000458380 195 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 LINC01399-202ENST00000458450 244 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 RNU6-635P-201ENST00000516651 102 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.61□□□□□ -2.15
NDE1Q9NXR1 MIR5094-201ENST00000578766 85 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.61□□□□□ -2.15
NDE1Q9NXR1 MIR4423-201ENST00000580922 80 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 AC136443.5-201ENST00000603741 370 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 AC011373.1-201ENST00000607270 237 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 MIR338-201ENST00000636369 67 ntBASIC1.61□□□□□ -2.15
NDE1Q9NXR1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
NDE1Q9NXR1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
NDE1Q9NXR1 RNU6-324P-201ENST00000363957 106 ntBASIC1.6□□□□□ -2.15
NDE1Q9NXR1 SNORD115-30-201ENST00000364117 82 ntBASIC1.6□□□□□ -2.15
NDE1Q9NXR1 RNU1-96P-201ENST00000364163 162 ntBASIC1.6□□□□□ -2.15
NDE1Q9NXR1 RNU6-1310P-201ENST00000384153 107 ntBASIC1.6□□□□□ -2.15
NDE1Q9NXR1 MIR215-201ENST00000384858 110 ntBASIC1.6□□□□□ -2.15
NDE1Q9NXR1 RNA5SP467-201ENST00000391274 118 ntBASIC1.6□□□□□ -2.15
NDE1Q9NXR1 RNU2-54P-201ENST00000410299 190 ntBASIC1.6□□□□□ -2.15
NDE1Q9NXR1 AC244636.1-201ENST00000421152 228 ntBASIC1.6□□□□□ -2.15
NDE1Q9NXR1 DYNLT3P2-201ENST00000442517 295 ntBASIC1.6□□□□□ -2.15
NDE1Q9NXR1 AC073910.1-201ENST00000445047 438 ntBASIC1.6□□□□□ -2.15
NDE1Q9NXR1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.6□□□□□ -2.15
NDE1Q9NXR1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.6□□□□□ -2.15
NDE1Q9NXR1 MIR3145-201ENST00000580727 82 ntBASIC1.6□□□□□ -2.15
NDE1Q9NXR1 AC022441.3-201ENST00000605737 136 ntBASIC1.6□□□□□ -2.15
NDE1Q9NXR1 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.6□□□□□ -2.15
NDE1Q9NXR1 RNU6-1309P-201ENST00000363305 108 ntBASIC1.59□□□□□ -2.15
NDE1Q9NXR1 SNORD113-8-201ENST00000363497 74 ntBASIC1.59□□□□□ -2.15
NDE1Q9NXR1 RNU6-770P-201ENST00000363929 105 ntBASIC1.59□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.230-201ENST00000364348 109 ntBASIC1.59□□□□□ -2.15
NDE1Q9NXR1 RNU6-407P-201ENST00000365280 104 ntBASIC1.59□□□□□ -2.15
NDE1Q9NXR1 RNU6-21P-201ENST00000384710 107 ntBASIC1.59□□□□□ -2.15
NDE1Q9NXR1 SNORA40.19-201ENST00000390846 128 ntBASIC1.59□□□□□ -2.15
NDE1Q9NXR1 RNU5A-5P-201ENST00000411054 116 ntBASIC1.59□□□□□ -2.15
NDE1Q9NXR1 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
NDE1Q9NXR1 RPS27P22-201ENST00000478056 241 ntBASIC1.59□□□□□ -2.15
NDE1Q9NXR1 RNA5SP182-201ENST00000516064 82 ntBASIC1.59□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.713-201ENST00000517013 96 ntBASIC1.59□□□□□ -2.15
NDE1Q9NXR1 AC008269.2-201ENST00000561915 1105 ntBASIC1.59□□□□□ -2.15
NDE1Q9NXR1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms