Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC016717.1-201ENST00000448918 286 ntBASIC3.69□□□□□ -1.82
CUEDC1Q9NWM3 RN7SL807P-201ENST00000470923 297 ntBASIC3.69□□□□□ -1.82
CUEDC1Q9NWM3 NDUFA4P2-201ENST00000489989 244 ntBASIC3.69□□□□□ -1.82
CUEDC1Q9NWM3 RAC1P2-201ENST00000511164 579 ntBASIC3.69□□□□□ -1.82
CUEDC1Q9NWM3 RNU2-34P-201ENST00000516534 121 ntBASIC3.69□□□□□ -1.82
CUEDC1Q9NWM3 RNU6-1270P-201ENST00000517128 108 ntBASIC3.69□□□□□ -1.82
CUEDC1Q9NWM3 MIR5197-201ENST00000583721 112 ntBASIC3.69□□□□□ -1.82
CUEDC1Q9NWM3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.69□□□□□ -1.82
CUEDC1Q9NWM3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.69□□□□□ -1.82
CUEDC1Q9NWM3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CUEDC1Q9NWM3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CUEDC1Q9NWM3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.68□□□□□ -1.82
CUEDC1Q9NWM3 Y_RNA.265-201ENST00000364677 108 ntBASIC3.68□□□□□ -1.82
CUEDC1Q9NWM3 SNORA5A-201ENST00000384111 134 ntBASIC3.68□□□□□ -1.82
CUEDC1Q9NWM3 MIR548D2-201ENST00000384955 97 ntBASIC3.68□□□□□ -1.82
CUEDC1Q9NWM3 AC006539.3-201ENST00000454258 129 ntBASIC3.68□□□□□ -1.82
CUEDC1Q9NWM3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.68□□□□□ -1.82
CUEDC1Q9NWM3 RNU7-172P-201ENST00000517125 64 ntBASIC3.68□□□□□ -1.82
CUEDC1Q9NWM3 AC109329.2-201ENST00000519658 482 ntBASIC3.68□□□□□ -1.82
CUEDC1Q9NWM3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.68□□□□□ -1.82
CUEDC1Q9NWM3 AC087499.8-201ENST00000578406 226 ntBASIC3.68□□□□□ -1.82
CUEDC1Q9NWM3 MIR3117-201ENST00000584034 78 ntBASIC3.68□□□□□ -1.82
CUEDC1Q9NWM3 MIR3616-201ENST00000584070 92 ntBASIC3.68□□□□□ -1.82
CUEDC1Q9NWM3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.68□□□□□ -1.82
CUEDC1Q9NWM3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.68□□□□□ -1.82
CUEDC1Q9NWM3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.68□□□□□ -1.82
CUEDC1Q9NWM3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CUEDC1Q9NWM3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CUEDC1Q9NWM3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
CUEDC1Q9NWM3 RNU6-234P-201ENST00000365229 104 ntBASIC3.67□□□□□ -1.82
CUEDC1Q9NWM3 Y_RNA.344-201ENST00000365381 112 ntBASIC3.67□□□□□ -1.82
CUEDC1Q9NWM3 MIR520G-201ENST00000385064 90 ntBASIC3.67□□□□□ -1.82
CUEDC1Q9NWM3 MIR1255A-201ENST00000408338 113 ntBASIC3.67□□□□□ -1.82
CUEDC1Q9NWM3 SCARNA23-201ENST00000516060 130 ntBASIC3.67□□□□□ -1.82
CUEDC1Q9NWM3 DEFB131E-201ENST00000532329 154 ntBASIC3.67□□□□□ -1.82
CUEDC1Q9NWM3 MIR4513-201ENST00000581077 86 ntBASIC3.67□□□□□ -1.82
CUEDC1Q9NWM3 MIR4438-201ENST00000585271 93 ntBASIC3.67□□□□□ -1.82
CUEDC1Q9NWM3 U3.45-201ENST00000607547 219 ntBASIC3.67□□□□□ -1.82
CUEDC1Q9NWM3 AC244205.2-202ENST00000635781 342 ntBASIC3.67□□□□□ -1.82
CUEDC1Q9NWM3 AL162726.3-218ENST00000636401 95 ntBASIC3.67□□□□□ -1.82
CUEDC1Q9NWM3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
CUEDC1Q9NWM3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CUEDC1Q9NWM3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.67□□□□□ -1.82
CUEDC1Q9NWM3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 RNU6-690P-201ENST00000365242 106 ntBASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 RNU6-1296P-201ENST00000383879 107 ntBASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 MIR183-201ENST00000384958 110 ntBASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 MIR627-201ENST00000384979 97 ntBASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 MIR1912-201ENST00000410389 80 ntBASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 SNRPGP13-201ENST00000442212 177 ntBASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 TRBV12-2-201ENST00000489763 344 ntBASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 RNU6-693P-201ENST00000516134 107 ntBASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 AC087685.1-201ENST00000587507 141 ntBASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 MIR5739-201ENST00000619803 80 ntBASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CUEDC1Q9NWM3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CUEDC1Q9NWM3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CUEDC1Q9NWM3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CUEDC1Q9NWM3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CUEDC1Q9NWM3 RNU6-461P-201ENST00000364195 107 ntBASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 RNU6-242P-201ENST00000384359 107 ntBASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 HMGN2P8-201ENST00000391458 268 ntBASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 SNORA3.3-201ENST00000408712 125 ntBASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 AC016909.1-201ENST00000415916 166 ntBASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 AL139247.1-201ENST00000422768 325 ntBASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 CYCSP35-201ENST00000451978 304 ntBASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 RPL39P39-201ENST00000455840 151 ntBASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 RN7SL93P-201ENST00000463035 293 ntBASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 AC022137.1-201ENST00000483735 151 ntBASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 HMGN1P7-201ENST00000491722 313 ntBASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 MIR3163-201ENST00000581592 73 ntBASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 AL137849.1-201ENST00000604767 169 ntBASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 SNORA62.6-201ENST00000606322 83 ntBASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 SCARNA15.3-201ENST00000626315 122 ntBASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 SCARNA4.1-201ENST00000628597 123 ntBASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CUEDC1Q9NWM3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 RNY1P1-201ENST00000364372 112 ntBASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 Y_RNA.298-201ENST00000364960 107 ntBASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 Y_RNA.410-201ENST00000383992 113 ntBASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 MIR548A2-201ENST00000384956 97 ntBASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 RPS29P4-201ENST00000414733 161 ntBASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.64□□□□□ -1.83
CUEDC1Q9NWM3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 209.2 ms