Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 MIR548B-201ENST00000385247 97 ntBASIC3.58□□□□□ -1.84
ATG3Q9NT62 SNORA36B-201ENST00000410438 131 ntBASIC3.58□□□□□ -1.84
ATG3Q9NT62 CYCSP48-201ENST00000417124 323 ntBASIC3.58□□□□□ -1.84
ATG3Q9NT62 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.58□□□□□ -1.84
ATG3Q9NT62 TOMM22P2-201ENST00000430735 237 ntBASIC3.58□□□□□ -1.84
ATG3Q9NT62 AL121890.1-201ENST00000435457 205 ntBASIC3.58□□□□□ -1.84
ATG3Q9NT62 Y_RNA.651-201ENST00000459380 103 ntBASIC3.58□□□□□ -1.84
ATG3Q9NT62 AC090142.3-201ENST00000519012 385 ntBASIC3.58□□□□□ -1.84
ATG3Q9NT62 MIR378D2-201ENST00000580636 98 ntBASIC3.58□□□□□ -1.84
ATG3Q9NT62 MIR5006-201ENST00000583027 110 ntBASIC3.58□□□□□ -1.84
ATG3Q9NT62 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.58□□□□□ -1.84
ATG3Q9NT62 AL670379.3-201ENST00000605040 251 ntBASIC3.58□□□□□ -1.84
ATG3Q9NT62 AC068647.2-201ENST00000637380 353 ntBASIC3.58□□□□□ -1.84
ATG3Q9NT62 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
ATG3Q9NT62 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
ATG3Q9NT62 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
ATG3Q9NT62 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ATG3Q9NT62 MIR450A1-201ENST00000362262 91 ntBASIC3.57□□□□□ -1.84
ATG3Q9NT62 RNU6-508P-201ENST00000363231 103 ntBASIC3.57□□□□□ -1.84
ATG3Q9NT62 Y_RNA.124-201ENST00000363339 93 ntBASIC3.57□□□□□ -1.84
ATG3Q9NT62 Y_RNA.495-201ENST00000384435 112 ntBASIC3.57□□□□□ -1.84
ATG3Q9NT62 SNORD116-21-201ENST00000384507 92 ntBASIC3.57□□□□□ -1.84
ATG3Q9NT62 MLLT10P1-201ENST00000418346 262 ntBASIC3.57□□□□□ -1.84
ATG3Q9NT62 RNU7-115P-201ENST00000516433 55 ntBASIC3.57□□□□□ -1.84
ATG3Q9NT62 RNA5SP148-201ENST00000516527 94 ntBASIC3.57□□□□□ -1.84
ATG3Q9NT62 RNU6-1061P-201ENST00000516530 99 ntBASIC3.57□□□□□ -1.84
ATG3Q9NT62 EIF4A1P12-201ENST00000551910 141 ntBASIC3.57□□□□□ -1.84
ATG3Q9NT62 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.57□□□□□ -1.84
ATG3Q9NT62 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ATG3Q9NT62 MIR3199-2-201ENST00000636243 86 ntBASIC3.57□□□□□ -1.84
ATG3Q9NT62 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
ATG3Q9NT62 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ATG3Q9NT62 FAM35CP-201ENST00000554755 2470 ntBASIC3.56□□□□□ -1.84
ATG3Q9NT62 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.56□□□□□ -1.84
ATG3Q9NT62 AC092435.3-201ENST00000565538 3654 ntBASIC3.56□□□□□ -1.84
ATG3Q9NT62 Y_RNA.114-201ENST00000363265 113 ntBASIC3.56□□□□□ -1.84
ATG3Q9NT62 RNY3P5-201ENST00000384127 102 ntBASIC3.56□□□□□ -1.84
ATG3Q9NT62 MIR887-201ENST00000401258 79 ntBASIC3.56□□□□□ -1.84
ATG3Q9NT62 AC244505.4-201ENST00000434905 287 ntBASIC3.56□□□□□ -1.84
ATG3Q9NT62 HSPE1P21-201ENST00000438283 308 ntBASIC3.56□□□□□ -1.84
ATG3Q9NT62 SSXP5-201ENST00000443473 287 ntBASIC3.56□□□□□ -1.84
ATG3Q9NT62 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.56□□□□□ -1.84
ATG3Q9NT62 RNU2-44P-201ENST00000516795 194 ntBASIC3.56□□□□□ -1.84
ATG3Q9NT62 AC133485.4-201ENST00000561835 220 ntBASIC3.56□□□□□ -1.84
ATG3Q9NT62 AC138907.4-201ENST00000570107 226 ntBASIC3.56□□□□□ -1.84
ATG3Q9NT62 AC008739.2-201ENST00000597006 317 ntBASIC3.56□□□□□ -1.84
ATG3Q9NT62 MIR548AY-201ENST00000617669 107 ntBASIC3.56□□□□□ -1.84
ATG3Q9NT62 AL590808.1-201ENST00000618696 141 ntBASIC3.56□□□□□ -1.84
ATG3Q9NT62 UCA1.1-201ENST00000620952 75 ntBASIC3.56□□□□□ -1.84
ATG3Q9NT62 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ATG3Q9NT62 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ATG3Q9NT62 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.55□□□□□ -1.84
ATG3Q9NT62 RNU6-978P-201ENST00000364371 103 ntBASIC3.55□□□□□ -1.84
ATG3Q9NT62 Y_RNA.369-201ENST00000365568 117 ntBASIC3.55□□□□□ -1.84
ATG3Q9NT62 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.55□□□□□ -1.84
ATG3Q9NT62 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.55□□□□□ -1.84
ATG3Q9NT62 AC006483.1-201ENST00000487308 313 ntBASIC3.55□□□□□ -1.84
ATG3Q9NT62 RNU6-781P-201ENST00000516377 101 ntBASIC3.55□□□□□ -1.84
ATG3Q9NT62 Y_RNA.692-201ENST00000516627 105 ntBASIC3.55□□□□□ -1.84
ATG3Q9NT62 AC027176.1-201ENST00000560204 514 ntBASIC3.55□□□□□ -1.84
ATG3Q9NT62 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ATG3Q9NT62 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.54□□□□□ -1.84
ATG3Q9NT62 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.54□□□□□ -1.84
ATG3Q9NT62 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ATG3Q9NT62 SNORD58C-201ENST00000365223 64 ntBASIC3.54□□□□□ -1.84
ATG3Q9NT62 SNORD116-13-201ENST00000384408 92 ntBASIC3.54□□□□□ -1.84
ATG3Q9NT62 MIR548A3-201ENST00000385297 97 ntBASIC3.54□□□□□ -1.84
ATG3Q9NT62 RNU6-750P-201ENST00000390946 107 ntBASIC3.54□□□□□ -1.84
ATG3Q9NT62 AC245047.4-201ENST00000433189 144 ntBASIC3.54□□□□□ -1.84
ATG3Q9NT62 AL161651.1-201ENST00000440882 223 ntBASIC3.54□□□□□ -1.84
ATG3Q9NT62 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.54□□□□□ -1.84
ATG3Q9NT62 AC008413.1-201ENST00000511864 177 ntBASIC3.54□□□□□ -1.84
ATG3Q9NT62 RNU2-60P-201ENST00000517290 128 ntBASIC3.54□□□□□ -1.84
ATG3Q9NT62 AC090115.4-201ENST00000609970 188 ntBASIC3.54□□□□□ -1.84
ATG3Q9NT62 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.54□□□□□ -1.84
ATG3Q9NT62 AC138915.1-201ENST00000565427 1685 ntBASIC3.54□□□□□ -1.84
ATG3Q9NT62 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
ATG3Q9NT62 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATG3Q9NT62 U3.8-201ENST00000363675 217 ntBASIC3.53□□□□□ -1.84
ATG3Q9NT62 RPL30P11-203ENST00000598995 310 ntBASIC3.53□□□□□ -1.84
ATG3Q9NT62 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.53□□□□□ -1.84
ATG3Q9NT62 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG3Q9NT62 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG3Q9NT62 Y_RNA.120-201ENST00000363304 110 ntBASIC3.52□□□□□ -1.85
ATG3Q9NT62 MIR512-1-201ENST00000384913 84 ntBASIC3.52□□□□□ -1.85
ATG3Q9NT62 Y_RNA.587-201ENST00000391210 103 ntBASIC3.52□□□□□ -1.85
ATG3Q9NT62 RNY4P30-201ENST00000410216 95 ntBASIC3.52□□□□□ -1.85
ATG3Q9NT62 Y_RNA.617-201ENST00000410920 90 ntBASIC3.52□□□□□ -1.85
ATG3Q9NT62 RNA5SP344-201ENST00000411081 104 ntBASIC3.52□□□□□ -1.85
ATG3Q9NT62 AC145146.1-201ENST00000496370 254 ntBASIC3.52□□□□□ -1.85
ATG3Q9NT62 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.52□□□□□ -1.85
ATG3Q9NT62 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.52□□□□□ -1.85
ATG3Q9NT62 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.52□□□□□ -1.85
ATG3Q9NT62 AC105137.2-201ENST00000569073 466 ntBASIC3.52□□□□□ -1.85
ATG3Q9NT62 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.52□□□□□ -1.85
ATG3Q9NT62 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
ATG3Q9NT62 AC010889.1-201ENST00000566193 2666 ntBASIC3.52□□□□□ -1.85
ATG3Q9NT62 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG3Q9NT62 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
ATG3Q9NT62 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms