Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AL163195.1-201ENST00000496941 348 ntBASIC2.13□□□□□ -2.07
NECTIN3Q9NQS3 RNU6-496P-201ENST00000516145 99 ntBASIC2.13□□□□□ -2.07
NECTIN3Q9NQS3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
NECTIN3Q9NQS3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.13□□□□□ -2.07
NECTIN3Q9NQS3 AC084364.2-201ENST00000546924 395 ntBASIC2.13□□□□□ -2.07
NECTIN3Q9NQS3 AC073413.2-201ENST00000604332 360 ntBASIC2.13□□□□□ -2.07
NECTIN3Q9NQS3 MIR6766-201ENST00000622641 72 ntBASIC2.13□□□□□ -2.07
NECTIN3Q9NQS3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
NECTIN3Q9NQS3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
NECTIN3Q9NQS3 AL356292.1-201ENST00000283110 373 ntBASIC2.12□□□□□ -2.07
NECTIN3Q9NQS3 SNORD114-7-201ENST00000362520 77 ntBASIC2.12□□□□□ -2.07
NECTIN3Q9NQS3 RNU1-22P-201ENST00000363334 158 ntBASIC2.12□□□□□ -2.07
NECTIN3Q9NQS3 Y_RNA.569-201ENST00000384749 103 ntBASIC2.12□□□□□ -2.07
NECTIN3Q9NQS3 Y_RNA.581-201ENST00000391017 97 ntBASIC2.12□□□□□ -2.07
NECTIN3Q9NQS3 MIR548F4-201ENST00000408515 105 ntBASIC2.12□□□□□ -2.07
NECTIN3Q9NQS3 RNU6-710P-201ENST00000410424 105 ntBASIC2.12□□□□□ -2.07
NECTIN3Q9NQS3 AL158823.1-201ENST00000418441 478 ntBASIC2.12□□□□□ -2.07
NECTIN3Q9NQS3 AC069257.2-201ENST00000441819 155 ntBASIC2.12□□□□□ -2.07
NECTIN3Q9NQS3 RPL23AP6-201ENST00000446637 472 ntBASIC2.12□□□□□ -2.07
NECTIN3Q9NQS3 HSPE1P25-201ENST00000455484 251 ntBASIC2.12□□□□□ -2.07
NECTIN3Q9NQS3 AC037487.3-201ENST00000606668 112 ntBASIC2.12□□□□□ -2.07
NECTIN3Q9NQS3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.12□□□□□ -2.07
NECTIN3Q9NQS3 Y_RNA.47-201ENST00000362697 108 ntBASIC2.11□□□□□ -2.07
NECTIN3Q9NQS3 snoU2_19.2-201ENST00000363024 80 ntBASIC2.11□□□□□ -2.07
NECTIN3Q9NQS3 RNU4-52P-201ENST00000384209 138 ntBASIC2.11□□□□□ -2.07
NECTIN3Q9NQS3 RNU6-1105P-201ENST00000384774 107 ntBASIC2.11□□□□□ -2.07
NECTIN3Q9NQS3 MIR221-201ENST00000385135 110 ntBASIC2.11□□□□□ -2.07
NECTIN3Q9NQS3 SNORA53-201ENST00000391141 249 ntBASIC2.11□□□□□ -2.07
NECTIN3Q9NQS3 RNU11-5P-201ENST00000391216 129 ntBASIC2.11□□□□□ -2.07
NECTIN3Q9NQS3 RNA5SP212-201ENST00000391223 107 ntBASIC2.11□□□□□ -2.07
NECTIN3Q9NQS3 RNU6-855P-201ENST00000410395 104 ntBASIC2.11□□□□□ -2.07
NECTIN3Q9NQS3 AL358176.2-201ENST00000425769 204 ntBASIC2.11□□□□□ -2.07
NECTIN3Q9NQS3 RNU6-1337P-201ENST00000516525 95 ntBASIC2.11□□□□□ -2.07
NECTIN3Q9NQS3 RNU6-63P-201ENST00000516690 95 ntBASIC2.11□□□□□ -2.07
NECTIN3Q9NQS3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.11□□□□□ -2.07
NECTIN3Q9NQS3 SUB1P4-201ENST00000566062 339 ntBASIC2.11□□□□□ -2.07
NECTIN3Q9NQS3 U6.104-201ENST00000637979 90 ntBASIC2.11□□□□□ -2.07
NECTIN3Q9NQS3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
NECTIN3Q9NQS3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
NECTIN3Q9NQS3 ZNF658B-202ENST00000615961 3375 ntBASIC2.1□□□□□ -2.07
NECTIN3Q9NQS3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
NECTIN3Q9NQS3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NECTIN3Q9NQS3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
NECTIN3Q9NQS3 RNU6-290P-201ENST00000365212 101 ntBASIC2.1□□□□□ -2.07
NECTIN3Q9NQS3 RNU6-136P-201ENST00000384663 107 ntBASIC2.1□□□□□ -2.07
NECTIN3Q9NQS3 MIR520A-201ENST00000384862 85 ntBASIC2.1□□□□□ -2.07
NECTIN3Q9NQS3 RNU2-61P-201ENST00000411069 191 ntBASIC2.1□□□□□ -2.07
NECTIN3Q9NQS3 AC245047.4-201ENST00000433189 144 ntBASIC2.1□□□□□ -2.07
NECTIN3Q9NQS3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.1□□□□□ -2.07
NECTIN3Q9NQS3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.1□□□□□ -2.07
NECTIN3Q9NQS3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.1□□□□□ -2.07
NECTIN3Q9NQS3 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.1□□□□□ -2.07
NECTIN3Q9NQS3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
NECTIN3Q9NQS3 AL596028.1-201ENST00000326971 197 ntBASIC2.09□□□□□ -2.07
NECTIN3Q9NQS3 Y_RNA.84-201ENST00000363011 104 ntBASIC2.09□□□□□ -2.07
NECTIN3Q9NQS3 RNU4-13P-201ENST00000364019 141 ntBASIC2.09□□□□□ -2.07
NECTIN3Q9NQS3 Y_RNA.361-201ENST00000365515 120 ntBASIC2.09□□□□□ -2.07
NECTIN3Q9NQS3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.09□□□□□ -2.07
NECTIN3Q9NQS3 RNU6-514P-201ENST00000384208 107 ntBASIC2.09□□□□□ -2.07
NECTIN3Q9NQS3 Y_RNA.541-201ENST00000384640 113 ntBASIC2.09□□□□□ -2.07
NECTIN3Q9NQS3 SNORA11.2-201ENST00000408318 127 ntBASIC2.09□□□□□ -2.07
NECTIN3Q9NQS3 MIR1302-6-201ENST00000408466 90 ntBASIC2.09□□□□□ -2.07
NECTIN3Q9NQS3 AL773524.1-201ENST00000614065 229 ntBASIC2.09□□□□□ -2.07
NECTIN3Q9NQS3 U6.108-201ENST00000637764 58 ntBASIC2.09□□□□□ -2.07
NECTIN3Q9NQS3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.09□□□□□ -2.07
NECTIN3Q9NQS3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
NECTIN3Q9NQS3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 SNORA25.1-201ENST00000362326 128 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 RNU4-80P-201ENST00000363200 141 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 RNU6-112P-201ENST00000363599 104 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 Y_RNA.461-201ENST00000384263 103 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 MIR1302-3-201ENST00000408128 138 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 RNA5SP100-201ENST00000410903 110 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 RNA5SP59-201ENST00000410922 110 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 AC244636.1-201ENST00000421152 228 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 OOSP1P1-201ENST00000423265 274 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 HMGN2P38-201ENST00000423806 265 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 HSPE1P13-201ENST00000451143 297 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 RNU6-717P-201ENST00000459076 104 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 RNU7-94P-201ENST00000459576 63 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 TRBVB-201ENST00000477100 408 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 RNU7-128P-201ENST00000517247 62 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 MIR4299-201ENST00000577899 72 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 AC005034.5-201ENST00000604219 466 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
NECTIN3Q9NQS3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NECTIN3Q9NQS3 Y_RNA.341-201ENST00000365341 102 ntBASIC2.07□□□□□ -2.08
NECTIN3Q9NQS3 Y_RNA.376-201ENST00000365638 108 ntBASIC2.07□□□□□ -2.08
NECTIN3Q9NQS3 RNA5SP109-201ENST00000391010 116 ntBASIC2.07□□□□□ -2.08
NECTIN3Q9NQS3 RNU6-1248P-201ENST00000391096 64 ntBASIC2.07□□□□□ -2.08
NECTIN3Q9NQS3 RNA5SP425-201ENST00000410336 112 ntBASIC2.07□□□□□ -2.08
NECTIN3Q9NQS3 RN7SKP223-201ENST00000410582 62 ntBASIC2.07□□□□□ -2.08
NECTIN3Q9NQS3 AL135786.1-201ENST00000415892 214 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms