Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 MIR1273D-201ENST00000577266 86 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 MIR4709-201ENST00000577272 72 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 SNRPGP19-201ENST00000603826 189 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 AC124312.5-201ENST00000604451 268 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 MIR219B-201ENST00000637023 88 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CHMP1AQ9HD42 AC100821.1-201ENST00000523153 2479 ntBASIC1.61□□□□□ -2.15
CHMP1AQ9HD42 SNORD81.1-201ENST00000363064 77 ntBASIC1.61□□□□□ -2.15
CHMP1AQ9HD42 Y_RNA.143-201ENST00000363520 106 ntBASIC1.61□□□□□ -2.15
CHMP1AQ9HD42 MIR1267-201ENST00000408723 78 ntBASIC1.61□□□□□ -2.15
CHMP1AQ9HD42 RNU5A-5P-201ENST00000411054 116 ntBASIC1.61□□□□□ -2.15
CHMP1AQ9HD42 RNU2-61P-201ENST00000411069 191 ntBASIC1.61□□□□□ -2.15
CHMP1AQ9HD42 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.61□□□□□ -2.15
CHMP1AQ9HD42 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.61□□□□□ -2.15
CHMP1AQ9HD42 AC010655.3-201ENST00000478818 450 ntBASIC1.61□□□□□ -2.15
CHMP1AQ9HD42 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.61□□□□□ -2.15
CHMP1AQ9HD42 SNORA44.1-201ENST00000517031 108 ntBASIC1.61□□□□□ -2.15
CHMP1AQ9HD42 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.61□□□□□ -2.15
CHMP1AQ9HD42 AC074050.1-201ENST00000563247 211 ntBASIC1.61□□□□□ -2.15
CHMP1AQ9HD42 AC024614.2-201ENST00000577584 372 ntBASIC1.61□□□□□ -2.15
CHMP1AQ9HD42 MIR3198-2-201ENST00000577868 80 ntBASIC1.61□□□□□ -2.15
CHMP1AQ9HD42 AC016925.2-201ENST00000605108 242 ntBASIC1.61□□□□□ -2.15
CHMP1AQ9HD42 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.61□□□□□ -2.15
CHMP1AQ9HD42 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 Y_RNA.11-201ENST00000362375 109 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 Y_RNA.172-201ENST00000363765 102 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 SNORA16.1-201ENST00000364597 132 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 RNU6-338P-201ENST00000383888 105 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 SNORD63-201ENST00000384262 68 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 Y_RNA.551-201ENST00000384661 102 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 RNU6-136P-201ENST00000384663 107 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 RNU6-376P-201ENST00000384731 106 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 RNU6-1031P-201ENST00000384773 107 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 RNA5SP425-201ENST00000410336 112 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 RNA5SP508-201ENST00000411327 119 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 FTH1P12-201ENST00000432137 551 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 RNU7-34P-201ENST00000459394 64 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 RNU7-94P-201ENST00000459576 63 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 RNU6-1337P-201ENST00000516525 95 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 Y_RNA.715-201ENST00000517082 110 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 AC022616.4-201ENST00000522985 181 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 AC091544.4-201ENST00000555268 342 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 RPL21P9-201ENST00000556149 474 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 AC136932.1-201ENST00000574771 208 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CHMP1AQ9HD42 WWP1P1-201ENST00000466609 2769 ntBASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 RNU4-82P-201ENST00000362443 140 ntBASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 RNU6-324P-201ENST00000363957 106 ntBASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 Y_RNA.329-201ENST00000365209 107 ntBASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 RNA5SP511-201ENST00000410487 115 ntBASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 DPH3P2-201ENST00000422618 250 ntBASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 HSPE1P13-201ENST00000451143 297 ntBASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 AC005042.3-201ENST00000453230 174 ntBASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 RNU6-1278P-201ENST00000516130 107 ntBASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 RNU6-1046P-201ENST00000516538 107 ntBASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 RNU6-341P-201ENST00000516973 96 ntBASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 Y_RNA.713-201ENST00000517013 96 ntBASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 RAC1P9-201ENST00000604990 392 ntBASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 AC021506.2-201ENST00000612354 169 ntBASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 AC040896.1-201ENST00000613819 479 ntBASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 SCARNA15.3-201ENST00000626315 122 ntBASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 SCARNA4.1-201ENST00000628597 123 ntBASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.59□□□□□ -2.15
CHMP1AQ9HD42 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 Y_RNA.158-201ENST00000363651 101 ntBASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 Y_RNA.331-201ENST00000365267 102 ntBASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 XGY1-201ENST00000381172 446 ntBASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 Y_RNA.389-201ENST00000383924 113 ntBASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 SNORD116-13-201ENST00000384408 92 ntBASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 RNU6-950P-201ENST00000384651 107 ntBASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 MIR1252-201ENST00000408861 65 ntBASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 RNU4-30P-201ENST00000410245 143 ntBASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 RN7SKP200-201ENST00000410564 320 ntBASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 AL390729.2-201ENST00000416137 156 ntBASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 SNORA70.12-201ENST00000516084 153 ntBASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 RNU6-397P-201ENST00000516226 104 ntBASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 RNU7-110P-201ENST00000516891 62 ntBASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 MIR4435-1-201ENST00000582552 80 ntBASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 AL356055.1-201ENST00000602528 446 ntBASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 AC011373.1-201ENST00000607270 237 ntBASIC1.58□□□□□ -2.16
CHMP1AQ9HD42 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
CHMP1AQ9HD42 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CHMP1AQ9HD42 MIR302D-201ENST00000362275 68 ntBASIC1.57□□□□□ -2.16
CHMP1AQ9HD42 RNU4-76P-201ENST00000364509 141 ntBASIC1.57□□□□□ -2.16
CHMP1AQ9HD42 Y_RNA.267-201ENST00000364679 109 ntBASIC1.57□□□□□ -2.16
CHMP1AQ9HD42 SNORA63.7-201ENST00000365579 123 ntBASIC1.57□□□□□ -2.16
CHMP1AQ9HD42 RNU6-1227P-201ENST00000383981 107 ntBASIC1.57□□□□□ -2.16
CHMP1AQ9HD42 RPL23AP36-201ENST00000413895 458 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms