Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 snoU2_19.1-201ENST00000362361 80 ntBASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 RNU1-105P-201ENST00000363470 161 ntBASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 SNORD73B-201ENST00000364394 72 ntBASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 RNU6-1164P-201ENST00000364428 107 ntBASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 RNU6-1180P-201ENST00000364935 107 ntBASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 RNA5SP496-201ENST00000391240 109 ntBASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 RNU6-588P-201ENST00000410281 105 ntBASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 RPL23AP7-203ENST00000449021 469 ntBASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 RNU6-772P-201ENST00000516042 105 ntBASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 SNORD33.1-201ENST00000516213 88 ntBASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 RNU5F-4P-201ENST00000516581 114 ntBASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 NDUFA5P6-201ENST00000542110 379 ntBASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CNTNAP4Q9C0A0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 AL136164.4-201ENST00000625013 2135 ntBASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 RNU6-915P-201ENST00000364943 103 ntBASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 Y_RNA.393-201ENST00000383936 102 ntBASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 Y_RNA.521-201ENST00000384560 114 ntBASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 SNORA36B-201ENST00000410438 131 ntBASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 Y_RNA.630-201ENST00000411370 108 ntBASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 RPS29P21-201ENST00000496272 170 ntBASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 AC010598.1-201ENST00000510378 103 ntBASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 SNORA31.1-201ENST00000515993 133 ntBASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 SNORA31.5-201ENST00000516190 133 ntBASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 RNA5SP309-201ENST00000516670 106 ntBASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 MIR3605-201ENST00000583214 100 ntBASIC3.34□□□□□ -1.87
CNTNAP4Q9C0A0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.34□□□□□ -1.88
CNTNAP4Q9C0A0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
CNTNAP4Q9C0A0 Y_RNA.388-201ENST00000383919 113 ntBASIC3.33□□□□□ -1.88
CNTNAP4Q9C0A0 Y_RNA.495-201ENST00000384435 112 ntBASIC3.33□□□□□ -1.88
CNTNAP4Q9C0A0 MT-TT-201ENST00000387460 66 ntBASIC3.33□□□□□ -1.88
CNTNAP4Q9C0A0 SNORA75.5-201ENST00000391291 81 ntBASIC3.33□□□□□ -1.88
CNTNAP4Q9C0A0 SNORA79-201ENST00000408376 140 ntBASIC3.33□□□□□ -1.88
CNTNAP4Q9C0A0 RNU2-55P-201ENST00000411146 174 ntBASIC3.33□□□□□ -1.88
CNTNAP4Q9C0A0 CYCSP49-201ENST00000420810 319 ntBASIC3.33□□□□□ -1.88
CNTNAP4Q9C0A0 EIF4EP4-201ENST00000424916 578 ntBASIC3.33□□□□□ -1.88
CNTNAP4Q9C0A0 snoU13.23-201ENST00000458863 104 ntBASIC3.33□□□□□ -1.88
CNTNAP4Q9C0A0 HMGN2P9-201ENST00000476875 229 ntBASIC3.33□□□□□ -1.88
CNTNAP4Q9C0A0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.33□□□□□ -1.88
CNTNAP4Q9C0A0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.33□□□□□ -1.88
CNTNAP4Q9C0A0 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.33□□□□□ -1.88
CNTNAP4Q9C0A0 AC006435.5-201ENST00000624486 112 ntBASIC3.33□□□□□ -1.88
CNTNAP4Q9C0A0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.33□□□□□ -1.88
CNTNAP4Q9C0A0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.33□□□□□ -1.88
CNTNAP4Q9C0A0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 MIR450A1-201ENST00000362262 91 ntBASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 RNU6-674P-201ENST00000363831 107 ntBASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 Y_RNA.280-201ENST00000364765 112 ntBASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 SNORD6-201ENST00000365444 73 ntBASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 RNU6-597P-201ENST00000365620 102 ntBASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 MIR27B-201ENST00000385129 97 ntBASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 AL512604.1-201ENST00000404812 257 ntBASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 MIR1283-1-201ENST00000408494 87 ntBASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 RNU7-57P-201ENST00000459540 60 ntBASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 RPS27P29-201ENST00000463110 252 ntBASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 RNU6-991P-201ENST00000516168 107 ntBASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 AC005972.2-201ENST00000604690 348 ntBASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 U4.3-201ENST00000621047 82 ntBASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 AC068647.2-201ENST00000637380 353 ntBASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 CENPCP1-201ENST00000533085 2578 ntBASIC3.32□□□□□ -1.88
CNTNAP4Q9C0A0 AC108206.1-201ENST00000570186 4159 ntBASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 Y_RNA.35-201ENST00000362601 101 ntBASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 SNORA27.1-201ENST00000362604 124 ntBASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 RNA5SP295-201ENST00000362655 121 ntBASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 MIR1294-201ENST00000408503 142 ntBASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 RNU4-53P-201ENST00000410828 140 ntBASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 AC117454.1-201ENST00000491120 168 ntBASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 RNA5SP112-201ENST00000515937 99 ntBASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 RNU6-1098P-201ENST00000516772 96 ntBASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 IGKV3-31-201ENST00000523109 329 ntBASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 MIR4753-201ENST00000585119 83 ntBASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
CNTNAP4Q9C0A0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CNTNAP4Q9C0A0 MAPK10-362ENST00000641864 4484 ntBASIC3.3□□□□□ -1.88
CNTNAP4Q9C0A0 SNORA20B-201ENST00000384220 132 ntBASIC3.3□□□□□ -1.88
CNTNAP4Q9C0A0 MIR181A2-201ENST00000384863 110 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 223.1 ms