Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RNU6-1278P-201ENST00000516130 107 ntBASIC2.44□□□□□ -2.02
RTFDC1Q9BY42 RNU6-1137P-201ENST00000517073 99 ntBASIC2.44□□□□□ -2.02
RTFDC1Q9BY42 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.44□□□□□ -2.02
RTFDC1Q9BY42 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.44□□□□□ -2.02
RTFDC1Q9BY42 MIR4438-201ENST00000585271 93 ntBASIC2.44□□□□□ -2.02
RTFDC1Q9BY42 U6.73-201ENST00000619194 103 ntBASIC2.44□□□□□ -2.02
RTFDC1Q9BY42 U6.104-201ENST00000637979 90 ntBASIC2.44□□□□□ -2.02
RTFDC1Q9BY42 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 Y_RNA.164-201ENST00000363709 102 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 RNU6-324P-201ENST00000363957 106 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 SNORA63C-201ENST00000364578 129 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 Y_RNA.287-201ENST00000364853 94 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 Y_RNA.361-201ENST00000365515 120 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 MIR562-201ENST00000384894 95 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 SNORD115-46-201ENST00000390982 71 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 RNA5SP212-201ENST00000391223 107 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 AL031003.1-201ENST00000404229 172 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 U3.40-201ENST00000408706 208 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 RPL23AP7-203ENST00000449021 469 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 AC025465.3-201ENST00000510570 311 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 RNY3P15-201ENST00000516297 97 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 RNU6-1045P-201ENST00000516321 107 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 RPL21P9-201ENST00000556149 474 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 MIR5089-201ENST00000580047 84 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 AC008737.2-201ENST00000599446 118 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 AC037487.3-201ENST00000606668 112 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 ZNF702P-202ENST00000434269 1966 ntBASIC2.43□□□□□ -2.02
RTFDC1Q9BY42 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 RNU4-90P-201ENST00000362773 141 ntBASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 RNU6-407P-201ENST00000365280 104 ntBASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 AL355796.1-201ENST00000406706 323 ntBASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 AC113618.1-201ENST00000416747 285 ntBASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 RPS26P55-201ENST00000471178 356 ntBASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 AC104435.1-201ENST00000483483 166 ntBASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 RNA5SP20-201ENST00000515976 84 ntBASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 RNU6-327P-201ENST00000516270 127 ntBASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 RNU7-99P-201ENST00000516271 62 ntBASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 SCARNA15.1-201ENST00000516384 125 ntBASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 AC055872.1-201ENST00000570978 278 ntBASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 MIR5094-201ENST00000578766 85 ntBASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 MIR3683-201ENST00000580847 82 ntBASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 AL360085.1-201ENST00000604713 532 ntBASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.42□□□□□ -2.02
RTFDC1Q9BY42 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
RTFDC1Q9BY42 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RTFDC1Q9BY42 Y_RNA.19-201ENST00000362462 99 ntBASIC2.41□□□□□ -2.02
RTFDC1Q9BY42 HSPE1P13-201ENST00000451143 297 ntBASIC2.41□□□□□ -2.02
RTFDC1Q9BY42 RNU6-1053P-201ENST00000515930 101 ntBASIC2.41□□□□□ -2.02
RTFDC1Q9BY42 RNU6-1046P-201ENST00000516538 107 ntBASIC2.41□□□□□ -2.02
RTFDC1Q9BY42 AC136932.1-201ENST00000574771 208 ntBASIC2.41□□□□□ -2.02
RTFDC1Q9BY42 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.41□□□□□ -2.02
RTFDC1Q9BY42 AC022513.1-201ENST00000624512 117 ntBASIC2.41□□□□□ -2.02
RTFDC1Q9BY42 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
RTFDC1Q9BY42 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
RTFDC1Q9BY42 SNORD113-8-201ENST00000363497 74 ntBASIC2.4□□□□□ -2.03
RTFDC1Q9BY42 Y_RNA.214-201ENST00000364201 112 ntBASIC2.4□□□□□ -2.03
RTFDC1Q9BY42 SNORA8-201ENST00000384574 139 ntBASIC2.4□□□□□ -2.03
RTFDC1Q9BY42 MIR520A-201ENST00000384862 85 ntBASIC2.4□□□□□ -2.03
RTFDC1Q9BY42 MIR17-201ENST00000385012 84 ntBASIC2.4□□□□□ -2.03
RTFDC1Q9BY42 RNU2-20P-201ENST00000410425 191 ntBASIC2.4□□□□□ -2.03
RTFDC1Q9BY42 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
RTFDC1Q9BY42 AC096920.1-201ENST00000423991 241 ntBASIC2.4□□□□□ -2.03
RTFDC1Q9BY42 AC099677.2-201ENST00000436385 175 ntBASIC2.4□□□□□ -2.03
RTFDC1Q9BY42 POLR2KP2-201ENST00000438155 177 ntBASIC2.4□□□□□ -2.03
RTFDC1Q9BY42 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.4□□□□□ -2.03
RTFDC1Q9BY42 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.4□□□□□ -2.03
RTFDC1Q9BY42 SUB1P4-201ENST00000566062 339 ntBASIC2.4□□□□□ -2.03
RTFDC1Q9BY42 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.4□□□□□ -2.03
RTFDC1Q9BY42 AC136443.5-201ENST00000603741 370 ntBASIC2.4□□□□□ -2.03
RTFDC1Q9BY42 AC010615.1-201ENST00000594254 1764 ntBASIC2.4□□□□□ -2.03
RTFDC1Q9BY42 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
RTFDC1Q9BY42 Y_RNA.459-201ENST00000384251 102 ntBASIC2.39□□□□□ -2.03
RTFDC1Q9BY42 RNU6-950P-201ENST00000384651 107 ntBASIC2.39□□□□□ -2.03
RTFDC1Q9BY42 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
RTFDC1Q9BY42 Y_RNA.581-201ENST00000391017 97 ntBASIC2.39□□□□□ -2.03
RTFDC1Q9BY42 RPL21P1-201ENST00000399532 476 ntBASIC2.39□□□□□ -2.03
RTFDC1Q9BY42 HMGB3P17-201ENST00000504195 649 ntBASIC2.39□□□□□ -2.03
RTFDC1Q9BY42 AC108729.3-201ENST00000513484 108 ntBASIC2.39□□□□□ -2.03
RTFDC1Q9BY42 AC097462.1-201ENST00000514125 324 ntBASIC2.39□□□□□ -2.03
RTFDC1Q9BY42 RNVU1-2-201ENST00000516326 135 ntBASIC2.39□□□□□ -2.03
RTFDC1Q9BY42 RNA5SP481-201ENST00000516814 122 ntBASIC2.39□□□□□ -2.03
RTFDC1Q9BY42 RNU7-172P-201ENST00000517125 64 ntBASIC2.39□□□□□ -2.03
RTFDC1Q9BY42 AC027419.1-201ENST00000522976 328 ntBASIC2.39□□□□□ -2.03
RTFDC1Q9BY42 AC023157.2-201ENST00000540596 141 ntBASIC2.39□□□□□ -2.03
RTFDC1Q9BY42 AC099654.10-201ENST00000640395 161 ntBASIC2.39□□□□□ -2.03
RTFDC1Q9BY42 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RTFDC1Q9BY42 AC080100.1-201ENST00000624239 5356 ntBASIC2.39□□□□□ -2.03
RTFDC1Q9BY42 ZNF720P1-201ENST00000562403 1939 ntBASIC2.38□□□□□ -2.03
RTFDC1Q9BY42 AL596028.1-201ENST00000326971 197 ntBASIC2.38□□□□□ -2.03
RTFDC1Q9BY42 RNU1-22P-201ENST00000363334 158 ntBASIC2.38□□□□□ -2.03
RTFDC1Q9BY42 Y_RNA.176-201ENST00000363815 109 ntBASIC2.38□□□□□ -2.03
RTFDC1Q9BY42 SNORA53-201ENST00000391141 249 ntBASIC2.38□□□□□ -2.03
RTFDC1Q9BY42 RNU6-1109P-201ENST00000391187 107 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms