Protein–RNA interactions for Protein: Q99966

CITED1, Cbp/p300-interacting transactivator 1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1Q99966 AL669831.3-213ENST00000636676 183 ntBASIC1.13□□□□□ -2.23
CITED1Q99966 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CITED1Q99966 RNA5SP327-201ENST00000362494 101 ntBASIC1.12□□□□□ -2.23
CITED1Q99966 RNU6-53P-201ENST00000365367 106 ntBASIC1.12□□□□□ -2.23
CITED1Q99966 RNU6-42P-201ENST00000384165 107 ntBASIC1.12□□□□□ -2.23
CITED1Q99966 MT-TL1-201ENST00000386347 75 ntBASIC1.12□□□□□ -2.23
CITED1Q99966 AL355796.1-201ENST00000406706 323 ntBASIC1.12□□□□□ -2.23
CITED1Q99966 MTCO3P19-201ENST00000415864 321 ntBASIC1.12□□□□□ -2.23
CITED1Q99966 U8.22-201ENST00000459141 133 ntBASIC1.12□□□□□ -2.23
CITED1Q99966 RNU6-625P-201ENST00000459412 107 ntBASIC1.12□□□□□ -2.23
CITED1Q99966 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.12□□□□□ -2.23
CITED1Q99966 RNU6-264P-201ENST00000517134 104 ntBASIC1.12□□□□□ -2.23
CITED1Q99966 AL357075.2-201ENST00000614906 189 ntBASIC1.12□□□□□ -2.23
CITED1Q99966 MIR8065-201ENST00000620577 100 ntBASIC1.12□□□□□ -2.23
CITED1Q99966 AC091895.1-201ENST00000624494 256 ntBASIC1.12□□□□□ -2.23
CITED1Q99966 SNORD3E-202ENST00000627253 216 ntBASIC1.12□□□□□ -2.23
CITED1Q99966 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CITED1Q99966 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.11□□□□□ -2.23
CITED1Q99966 U8.1-201ENST00000362843 134 ntBASIC1.11□□□□□ -2.23
CITED1Q99966 Y_RNA.265-201ENST00000364677 108 ntBASIC1.11□□□□□ -2.23
CITED1Q99966 RNU6-99P-201ENST00000364721 107 ntBASIC1.11□□□□□ -2.23
CITED1Q99966 MIR1304-201ENST00000408243 91 ntBASIC1.11□□□□□ -2.23
CITED1Q99966 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.11□□□□□ -2.23
CITED1Q99966 MTND1P2-201ENST00000430604 821 ntBASIC1.11□□□□□ -2.23
CITED1Q99966 STAG3L5P-204ENST00000443759 179 ntBASIC1.11□□□□□ -2.23
CITED1Q99966 RPS23P4-201ENST00000487908 423 ntBASIC1.11□□□□□ -2.23
CITED1Q99966 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.11□□□□□ -2.23
CITED1Q99966 AC097462.1-201ENST00000514125 324 ntBASIC1.11□□□□□ -2.23
CITED1Q99966 RNA5SP20-201ENST00000515976 84 ntBASIC1.11□□□□□ -2.23
CITED1Q99966 RNA5SP220-201ENST00000516298 104 ntBASIC1.11□□□□□ -2.23
CITED1Q99966 RNU6-1213P-201ENST00000517075 94 ntBASIC1.11□□□□□ -2.23
CITED1Q99966 AP003033.1-201ENST00000527244 415 ntBASIC1.11□□□□□ -2.23
CITED1Q99966 AL390123.1-201ENST00000603216 237 ntBASIC1.11□□□□□ -2.23
CITED1Q99966 AC136443.5-201ENST00000603741 370 ntBASIC1.11□□□□□ -2.23
CITED1Q99966 AL078603.1-201ENST00000603824 313 ntBASIC1.11□□□□□ -2.23
CITED1Q99966 SNORA28-201ENST00000606769 126 ntBASIC1.11□□□□□ -2.23
CITED1Q99966 MIR6079-201ENST00000635807 62 ntBASIC1.11□□□□□ -2.23
CITED1Q99966 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CITED1Q99966 RNU1-22P-201ENST00000363334 158 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 Y_RNA.267-201ENST00000364679 109 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 Y_RNA.279-201ENST00000364763 95 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 SNORD114-22-201ENST00000365423 72 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 RNU6-376P-201ENST00000384731 106 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 SNORD12B-201ENST00000410433 91 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 RNU6-370P-201ENST00000411008 104 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.1□□□□□ -2.23
CITED1Q99966 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.1□□□□□ -2.23
CITED1Q99966 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.1□□□□□ -2.23
CITED1Q99966 MTND4P17-201ENST00000470444 350 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 AL133373.1-201ENST00000497098 94 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 SNORA40.9-201ENST00000515895 93 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 RNU2-56P-201ENST00000516826 190 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 RN7SKP88-201ENST00000516847 250 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.1□□□□□ -2.23
CITED1Q99966 MIR5690-201ENST00000583739 73 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 7SK.8-201ENST00000612110 250 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 7SK.11-201ENST00000615477 250 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 RMST_2.1-201ENST00000617263 136 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 AC073349.3-201ENST00000617616 186 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 7SK.13-201ENST00000622040 250 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 MIR3674-201ENST00000636576 68 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 TPTEP1-208ENST00000636884 213 ntBASIC1.1□□□□□ -2.23
CITED1Q99966 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.09□□□□□ -2.23
CITED1Q99966 Y_RNA.166-201ENST00000363730 102 ntBASIC1.09□□□□□ -2.23
CITED1Q99966 MIR562-201ENST00000384894 95 ntBASIC1.09□□□□□ -2.23
CITED1Q99966 MIR625-201ENST00000385047 85 ntBASIC1.09□□□□□ -2.23
CITED1Q99966 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
CITED1Q99966 Y_RNA.599-201ENST00000410489 109 ntBASIC1.09□□□□□ -2.23
CITED1Q99966 RNU6-1278P-201ENST00000516130 107 ntBASIC1.09□□□□□ -2.23
CITED1Q99966 Y_RNA.675-201ENST00000516389 149 ntBASIC1.09□□□□□ -2.23
CITED1Q99966 MIR2355-201ENST00000517199 87 ntBASIC1.09□□□□□ -2.23
CITED1Q99966 AL513423.1-201ENST00000621695 132 ntBASIC1.09□□□□□ -2.23
CITED1Q99966 SNORA27.1-201ENST00000362604 124 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 RNU1-124P-201ENST00000363861 145 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 RNU6-1310P-201ENST00000384153 107 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 RNU6-318P-201ENST00000384283 103 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 Y_RNA.505-201ENST00000384489 102 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 Y_RNA.540-201ENST00000384638 111 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 MIR320A-201ENST00000385302 82 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 SNORA69.1-201ENST00000390904 137 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 RNU4-14P-201ENST00000410858 122 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 PDCL2P1-201ENST00000419302 352 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 AC018865.2-201ENST00000423631 129 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 RAB28P5-201ENST00000427490 651 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.08□□□□□ -2.24
CITED1Q99966 SNRPGP13-201ENST00000442212 177 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 AC023790.1-201ENST00000482174 347 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.08□□□□□ -2.24
CITED1Q99966 SNORD116-28-201ENST00000516123 91 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 Y_RNA.691-201ENST00000516611 103 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 RNA5SP404-201ENST00000517118 132 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.08□□□□□ -2.24
CITED1Q99966 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.08□□□□□ -2.24
CITED1Q99966 MIR3664-201ENST00000579074 99 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 HSPE1P19-201ENST00000603327 295 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 AC106754.2-201ENST00000623006 233 ntBASIC1.08□□□□□ -2.24
CITED1Q99966 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CITED1Q99966 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
CITED1Q99966 AL391516.1-201ENST00000554380 2449 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms