Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.5□□□□□ -1.85
ARID3AQ99856 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ARID3AQ99856 AC100821.1-201ENST00000523153 2479 ntBASIC3.5□□□□□ -1.85
ARID3AQ99856 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.5□□□□□ -1.85
ARID3AQ99856 ZNF658B-202ENST00000615961 3375 ntBASIC3.49□□□□□ -1.85
ARID3AQ99856 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.49□□□□□ -1.85
ARID3AQ99856 RNU6-1048P-201ENST00000364054 107 ntBASIC3.49□□□□□ -1.85
ARID3AQ99856 Y_RNA.274-201ENST00000364714 101 ntBASIC3.49□□□□□ -1.85
ARID3AQ99856 Y_RNA.297-201ENST00000364950 91 ntBASIC3.49□□□□□ -1.85
ARID3AQ99856 RNU6-301P-201ENST00000384277 107 ntBASIC3.49□□□□□ -1.85
ARID3AQ99856 SNORA8-201ENST00000384574 139 ntBASIC3.49□□□□□ -1.85
ARID3AQ99856 RPS4XP11-201ENST00000446897 772 ntBASIC3.49□□□□□ -1.85
ARID3AQ99856 HMGB3P3-201ENST00000510526 400 ntBASIC3.49□□□□□ -1.85
ARID3AQ99856 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
ARID3AQ99856 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
ARID3AQ99856 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.48□□□□□ -1.85
ARID3AQ99856 Y_RNA.29-201ENST00000362570 113 ntBASIC3.48□□□□□ -1.85
ARID3AQ99856 MIR597-201ENST00000384968 97 ntBASIC3.48□□□□□ -1.85
ARID3AQ99856 SNORA36B-201ENST00000410438 131 ntBASIC3.48□□□□□ -1.85
ARID3AQ99856 CST9LP2-201ENST00000437612 320 ntBASIC3.48□□□□□ -1.85
ARID3AQ99856 RN7SL429P-201ENST00000479090 223 ntBASIC3.48□□□□□ -1.85
ARID3AQ99856 RN7SL489P-201ENST00000486185 223 ntBASIC3.48□□□□□ -1.85
ARID3AQ99856 RN7SL327P-201ENST00000488659 223 ntBASIC3.48□□□□□ -1.85
ARID3AQ99856 AC117454.1-201ENST00000491120 168 ntBASIC3.48□□□□□ -1.85
ARID3AQ99856 RNA5SP367-201ENST00000516557 118 ntBASIC3.48□□□□□ -1.85
ARID3AQ99856 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ARID3AQ99856 RN7SL853P-201ENST00000617250 223 ntBASIC3.48□□□□□ -1.85
ARID3AQ99856 MIR8057-201ENST00000620957 69 ntBASIC3.48□□□□□ -1.85
ARID3AQ99856 MIR6079-201ENST00000635807 62 ntBASIC3.48□□□□□ -1.85
ARID3AQ99856 AC134026.1-201ENST00000623249 2239 ntBASIC3.48□□□□□ -1.85
ARID3AQ99856 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.47□□□□□ -1.85
ARID3AQ99856 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
ARID3AQ99856 SNORA33-201ENST00000363664 130 ntBASIC3.47□□□□□ -1.85
ARID3AQ99856 Y_RNA.510-201ENST00000384511 114 ntBASIC3.47□□□□□ -1.85
ARID3AQ99856 SNORA8.3-201ENST00000384679 139 ntBASIC3.47□□□□□ -1.85
ARID3AQ99856 AL163195.1-201ENST00000496941 348 ntBASIC3.47□□□□□ -1.85
ARID3AQ99856 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.47□□□□□ -1.85
ARID3AQ99856 RNU7-193P-201ENST00000516723 65 ntBASIC3.47□□□□□ -1.85
ARID3AQ99856 SNORA81.3-201ENST00000517283 198 ntBASIC3.47□□□□□ -1.85
ARID3AQ99856 MIR2682-201ENST00000580305 110 ntBASIC3.47□□□□□ -1.85
ARID3AQ99856 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.47□□□□□ -1.85
ARID3AQ99856 Y_RNA.802-201ENST00000614892 130 ntBASIC3.47□□□□□ -1.85
ARID3AQ99856 MIR7112-201ENST00000616126 65 ntBASIC3.47□□□□□ -1.85
ARID3AQ99856 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ARID3AQ99856 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ARID3AQ99856 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ARID3AQ99856 MIR626-201ENST00000385032 94 ntBASIC3.46□□□□□ -1.86
ARID3AQ99856 RNA5SP450-201ENST00000411206 102 ntBASIC3.46□□□□□ -1.86
ARID3AQ99856 Y_RNA.644-201ENST00000459006 113 ntBASIC3.46□□□□□ -1.86
ARID3AQ99856 Y_RNA.674-201ENST00000516362 113 ntBASIC3.46□□□□□ -1.86
ARID3AQ99856 RNU2-19P-201ENST00000517288 84 ntBASIC3.46□□□□□ -1.86
ARID3AQ99856 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.46□□□□□ -1.86
ARID3AQ99856 AC010297.1-201ENST00000623948 149 ntBASIC3.46□□□□□ -1.86
ARID3AQ99856 AC073476.4-201ENST00000628409 72 ntBASIC3.46□□□□□ -1.86
ARID3AQ99856 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
ARID3AQ99856 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.46□□□□□ -1.86
ARID3AQ99856 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ARID3AQ99856 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.45□□□□□ -1.86
ARID3AQ99856 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
ARID3AQ99856 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.45□□□□□ -1.86
ARID3AQ99856 RNU6-437P-201ENST00000459408 95 ntBASIC3.45□□□□□ -1.86
ARID3AQ99856 AC109925.1-201ENST00000478069 331 ntBASIC3.45□□□□□ -1.86
ARID3AQ99856 SNORA31.15-201ENST00000516771 132 ntBASIC3.45□□□□□ -1.86
ARID3AQ99856 RNU6-182P-201ENST00000516970 105 ntBASIC3.45□□□□□ -1.86
ARID3AQ99856 RNU6-1096P-201ENST00000517089 102 ntBASIC3.45□□□□□ -1.86
ARID3AQ99856 SUB1P4-201ENST00000566062 339 ntBASIC3.45□□□□□ -1.86
ARID3AQ99856 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.44□□□□□ -1.86
ARID3AQ99856 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
ARID3AQ99856 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.44□□□□□ -1.86
ARID3AQ99856 RNU4-17P-201ENST00000365598 141 ntBASIC3.44□□□□□ -1.86
ARID3AQ99856 AC245047.4-201ENST00000433189 144 ntBASIC3.44□□□□□ -1.86
ARID3AQ99856 AC091021.1-201ENST00000468051 388 ntBASIC3.44□□□□□ -1.86
ARID3AQ99856 AC011604.1-201ENST00000545978 196 ntBASIC3.44□□□□□ -1.86
ARID3AQ99856 EIF4BP1-201ENST00000554881 351 ntBASIC3.44□□□□□ -1.86
ARID3AQ99856 MIR2681-201ENST00000581814 105 ntBASIC3.44□□□□□ -1.86
ARID3AQ99856 MIR3605-201ENST00000583214 100 ntBASIC3.44□□□□□ -1.86
ARID3AQ99856 uc_338.25-201ENST00000613756 156 ntBASIC3.44□□□□□ -1.86
ARID3AQ99856 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.44□□□□□ -1.86
ARID3AQ99856 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ARID3AQ99856 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
ARID3AQ99856 SNORA5B-201ENST00000363786 132 ntBASIC3.43□□□□□ -1.86
ARID3AQ99856 SNORA63D-201ENST00000364359 132 ntBASIC3.43□□□□□ -1.86
ARID3AQ99856 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.43□□□□□ -1.86
ARID3AQ99856 Z98949.2-201ENST00000440996 144 ntBASIC3.43□□□□□ -1.86
ARID3AQ99856 RPS27AP9-201ENST00000477681 438 ntBASIC3.43□□□□□ -1.86
ARID3AQ99856 RN7SL297P-201ENST00000483161 293 ntBASIC3.43□□□□□ -1.86
ARID3AQ99856 RPL23AP54-201ENST00000495129 419 ntBASIC3.43□□□□□ -1.86
ARID3AQ99856 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.43□□□□□ -1.86
ARID3AQ99856 AC084364.2-201ENST00000546924 395 ntBASIC3.43□□□□□ -1.86
ARID3AQ99856 MIR4724-201ENST00000579485 89 ntBASIC3.43□□□□□ -1.86
ARID3AQ99856 Y_RNA.293-201ENST00000364908 93 ntBASIC3.42□□□□□ -1.86
ARID3AQ99856 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
ARID3AQ99856 RNA5SP496-201ENST00000391240 109 ntBASIC3.42□□□□□ -1.86
ARID3AQ99856 SNORD23.1-201ENST00000408212 104 ntBASIC3.42□□□□□ -1.86
ARID3AQ99856 RNA5SP501-201ENST00000410990 112 ntBASIC3.42□□□□□ -1.86
ARID3AQ99856 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
ARID3AQ99856 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.42□□□□□ -1.86
ARID3AQ99856 AC011753.1-201ENST00000451001 220 ntBASIC3.42□□□□□ -1.86
ARID3AQ99856 RNU7-120P-201ENST00000459334 63 ntBASIC3.42□□□□□ -1.86
ARID3AQ99856 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms