Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 Y_RNA.152-201ENST00000363578 100 ntBASIC2.14□□□□□ -2.07
CCDC138Q96M89 Y_RNA.326-201ENST00000365176 113 ntBASIC2.14□□□□□ -2.07
CCDC138Q96M89 Y_RNA.331-201ENST00000365267 102 ntBASIC2.14□□□□□ -2.07
CCDC138Q96M89 RNU6-21P-201ENST00000384710 107 ntBASIC2.14□□□□□ -2.07
CCDC138Q96M89 AL590004.1-201ENST00000405321 300 ntBASIC2.14□□□□□ -2.07
CCDC138Q96M89 RNU6-985P-201ENST00000410182 104 ntBASIC2.14□□□□□ -2.07
CCDC138Q96M89 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC138Q96M89 AC073910.1-201ENST00000445047 438 ntBASIC2.14□□□□□ -2.07
CCDC138Q96M89 snoU13.23-201ENST00000458863 104 ntBASIC2.14□□□□□ -2.07
CCDC138Q96M89 RNU7-94P-201ENST00000459576 63 ntBASIC2.14□□□□□ -2.07
CCDC138Q96M89 RPL23AP42-201ENST00000471152 471 ntBASIC2.14□□□□□ -2.07
CCDC138Q96M89 RPL36AP21-201ENST00000490372 323 ntBASIC2.14□□□□□ -2.07
CCDC138Q96M89 RPL23AP63-201ENST00000498752 471 ntBASIC2.14□□□□□ -2.07
CCDC138Q96M89 RNU6-436P-201ENST00000516171 114 ntBASIC2.14□□□□□ -2.07
CCDC138Q96M89 RNA5SP364-201ENST00000516938 78 ntBASIC2.14□□□□□ -2.07
CCDC138Q96M89 RNU6-1137P-201ENST00000517073 99 ntBASIC2.14□□□□□ -2.07
CCDC138Q96M89 MIR4448-201ENST00000584360 86 ntBASIC2.14□□□□□ -2.07
CCDC138Q96M89 AC127459.3-201ENST00000624328 466 ntBASIC2.14□□□□□ -2.07
CCDC138Q96M89 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
CCDC138Q96M89 RNA5SP138-201ENST00000365098 114 ntBASIC2.13□□□□□ -2.07
CCDC138Q96M89 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CCDC138Q96M89 HSPE1P9-201ENST00000440046 311 ntBASIC2.13□□□□□ -2.07
CCDC138Q96M89 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC138Q96M89 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC138Q96M89 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.13□□□□□ -2.07
CCDC138Q96M89 RNU6-1278P-201ENST00000516130 107 ntBASIC2.13□□□□□ -2.07
CCDC138Q96M89 RNU6-966P-201ENST00000516479 104 ntBASIC2.13□□□□□ -2.07
CCDC138Q96M89 RNU6-1046P-201ENST00000516538 107 ntBASIC2.13□□□□□ -2.07
CCDC138Q96M89 RNA5SP437-201ENST00000517249 129 ntBASIC2.13□□□□□ -2.07
CCDC138Q96M89 AC136932.1-201ENST00000574771 208 ntBASIC2.13□□□□□ -2.07
CCDC138Q96M89 Y_RNA.812-201ENST00000610788 101 ntBASIC2.13□□□□□ -2.07
CCDC138Q96M89 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.13□□□□□ -2.07
CCDC138Q96M89 Y_RNA.784-201ENST00000613803 101 ntBASIC2.13□□□□□ -2.07
CCDC138Q96M89 Y_RNA.787-201ENST00000616522 101 ntBASIC2.13□□□□□ -2.07
CCDC138Q96M89 Y_RNA.780-201ENST00000617336 101 ntBASIC2.13□□□□□ -2.07
CCDC138Q96M89 Y_RNA.801-201ENST00000619005 101 ntBASIC2.13□□□□□ -2.07
CCDC138Q96M89 AC064859.1-201ENST00000624741 174 ntBASIC2.13□□□□□ -2.07
CCDC138Q96M89 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CCDC138Q96M89 RNU6-505P-201ENST00000384427 107 ntBASIC2.12□□□□□ -2.07
CCDC138Q96M89 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CCDC138Q96M89 MIR676-201ENST00000390702 67 ntBASIC2.12□□□□□ -2.07
CCDC138Q96M89 RNU6-360P-201ENST00000390944 104 ntBASIC2.12□□□□□ -2.07
CCDC138Q96M89 HMGN2P19-201ENST00000425149 265 ntBASIC2.12□□□□□ -2.07
CCDC138Q96M89 AL356320.1-201ENST00000429616 163 ntBASIC2.12□□□□□ -2.07
CCDC138Q96M89 HSPE1P13-201ENST00000451143 297 ntBASIC2.12□□□□□ -2.07
CCDC138Q96M89 RNU6-717P-201ENST00000459076 104 ntBASIC2.12□□□□□ -2.07
CCDC138Q96M89 RPS29P21-201ENST00000496272 170 ntBASIC2.12□□□□□ -2.07
CCDC138Q96M89 SEPT14P8-201ENST00000508026 178 ntBASIC2.12□□□□□ -2.07
CCDC138Q96M89 RNU1-40P-201ENST00000516816 164 ntBASIC2.12□□□□□ -2.07
CCDC138Q96M89 RNU1-97P-201ENST00000516872 164 ntBASIC2.12□□□□□ -2.07
CCDC138Q96M89 SNORA40.15-201ENST00000516884 107 ntBASIC2.12□□□□□ -2.07
CCDC138Q96M89 RNU6-548P-201ENST00000517083 115 ntBASIC2.12□□□□□ -2.07
CCDC138Q96M89 AC131281.1-201ENST00000522984 164 ntBASIC2.12□□□□□ -2.07
CCDC138Q96M89 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC138Q96M89 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC138Q96M89 MIR4719-201ENST00000585233 84 ntBASIC2.12□□□□□ -2.07
CCDC138Q96M89 AC006504.6-201ENST00000590142 199 ntBASIC2.12□□□□□ -2.07
CCDC138Q96M89 AC073413.2-201ENST00000604332 360 ntBASIC2.12□□□□□ -2.07
CCDC138Q96M89 MIR376A1-201ENST00000616574 68 ntBASIC2.12□□□□□ -2.07
CCDC138Q96M89 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC138Q96M89 AC018630.2-201ENST00000534866 2403 ntBASIC2.11□□□□□ -2.07
CCDC138Q96M89 RNU6-376P-201ENST00000384731 106 ntBASIC2.11□□□□□ -2.07
CCDC138Q96M89 RNA5SP109-201ENST00000391010 116 ntBASIC2.11□□□□□ -2.07
CCDC138Q96M89 RN7SKP192-201ENST00000411291 327 ntBASIC2.11□□□□□ -2.07
CCDC138Q96M89 AL135786.1-201ENST00000415892 214 ntBASIC2.11□□□□□ -2.07
CCDC138Q96M89 SCARNA16.3-201ENST00000516595 184 ntBASIC2.11□□□□□ -2.07
CCDC138Q96M89 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.11□□□□□ -2.07
CCDC138Q96M89 SNORD113-5-201ENST00000607261 78 ntBASIC2.11□□□□□ -2.07
CCDC138Q96M89 uc_338.20-201ENST00000621563 178 ntBASIC2.11□□□□□ -2.07
CCDC138Q96M89 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.11□□□□□ -2.07
CCDC138Q96M89 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC138Q96M89 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CCDC138Q96M89 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC138Q96M89 RNU6-661P-201ENST00000362409 107 ntBASIC2.1□□□□□ -2.07
CCDC138Q96M89 Y_RNA.276-201ENST00000364732 109 ntBASIC2.1□□□□□ -2.07
CCDC138Q96M89 Y_RNA.329-201ENST00000365209 107 ntBASIC2.1□□□□□ -2.07
CCDC138Q96M89 SNORA67.3-201ENST00000384366 140 ntBASIC2.1□□□□□ -2.07
CCDC138Q96M89 RNU6-950P-201ENST00000384651 107 ntBASIC2.1□□□□□ -2.07
CCDC138Q96M89 SNORD115-46-201ENST00000390982 71 ntBASIC2.1□□□□□ -2.07
CCDC138Q96M89 AL023284.1-201ENST00000403956 276 ntBASIC2.1□□□□□ -2.07
CCDC138Q96M89 RNU4-30P-201ENST00000410245 143 ntBASIC2.1□□□□□ -2.07
CCDC138Q96M89 RNU2-61P-201ENST00000411069 191 ntBASIC2.1□□□□□ -2.07
CCDC138Q96M89 FTH1P12-201ENST00000432137 551 ntBASIC2.1□□□□□ -2.07
CCDC138Q96M89 MIR4300-201ENST00000581016 96 ntBASIC2.1□□□□□ -2.07
CCDC138Q96M89 AC022217.4-201ENST00000604389 163 ntBASIC2.1□□□□□ -2.07
CCDC138Q96M89 MIR6873-201ENST00000622788 63 ntBASIC2.1□□□□□ -2.07
CCDC138Q96M89 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CCDC138Q96M89 Y_RNA.210-201ENST00000364161 110 ntBASIC2.09□□□□□ -2.07
CCDC138Q96M89 RNU6-117P-201ENST00000365415 107 ntBASIC2.09□□□□□ -2.07
CCDC138Q96M89 RPL21P1-201ENST00000399532 476 ntBASIC2.09□□□□□ -2.07
CCDC138Q96M89 RN7SKP223-201ENST00000410582 62 ntBASIC2.09□□□□□ -2.07
CCDC138Q96M89 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC138Q96M89 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC138Q96M89 RPS27P1-201ENST00000450552 247 ntBASIC2.09□□□□□ -2.07
CCDC138Q96M89 HMGB3P17-201ENST00000504195 649 ntBASIC2.09□□□□□ -2.07
CCDC138Q96M89 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC138Q96M89 AC103810.8-201ENST00000607347 118 ntBASIC2.09□□□□□ -2.07
CCDC138Q96M89 MIR7111-201ENST00000619751 72 ntBASIC2.09□□□□□ -2.07
CCDC138Q96M89 MIR6079-201ENST00000635807 62 ntBASIC2.09□□□□□ -2.07
CCDC138Q96M89 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 197.1 ms