Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 Y_RNA.542-201ENST00000384641 111 ntBASIC3.5□□□□□ -1.85
CALR3Q96L12 SNORA11.4-201ENST00000408823 129 ntBASIC3.5□□□□□ -1.85
CALR3Q96L12 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.5□□□□□ -1.85
CALR3Q96L12 AC099677.2-201ENST00000436385 175 ntBASIC3.5□□□□□ -1.85
CALR3Q96L12 NDUFA4P2-201ENST00000489989 244 ntBASIC3.5□□□□□ -1.85
CALR3Q96L12 AC022202.1-201ENST00000613515 211 ntBASIC3.5□□□□□ -1.85
CALR3Q96L12 TUG1_4.1-201ENST00000619464 181 ntBASIC3.5□□□□□ -1.85
CALR3Q96L12 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.5□□□□□ -1.85
CALR3Q96L12 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CALR3Q96L12 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CALR3Q96L12 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CALR3Q96L12 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CALR3Q96L12 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CALR3Q96L12 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CALR3Q96L12 MIR539-201ENST00000365690 78 ntBASIC3.49□□□□□ -1.85
CALR3Q96L12 RNU6-460P-201ENST00000391158 108 ntBASIC3.49□□□□□ -1.85
CALR3Q96L12 AC115115.1-201ENST00000449927 248 ntBASIC3.49□□□□□ -1.85
CALR3Q96L12 AL049830.1-201ENST00000468034 425 ntBASIC3.49□□□□□ -1.85
CALR3Q96L12 Y_RNA.714-201ENST00000517065 90 ntBASIC3.49□□□□□ -1.85
CALR3Q96L12 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.49□□□□□ -1.85
CALR3Q96L12 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.49□□□□□ -1.85
CALR3Q96L12 AC005786.1-201ENST00000588553 154 ntBASIC3.49□□□□□ -1.85
CALR3Q96L12 AP001340.1-201ENST00000624405 217 ntBASIC3.49□□□□□ -1.85
CALR3Q96L12 AC009093.8-201ENST00000641769 292 ntBASIC3.49□□□□□ -1.85
CALR3Q96L12 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.49□□□□□ -1.85
CALR3Q96L12 AL161431.1-201ENST00000618966 4205 ntBASIC3.49□□□□□ -1.85
CALR3Q96L12 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CALR3Q96L12 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CALR3Q96L12 SNORA1B-201ENST00000362535 133 ntBASIC3.48□□□□□ -1.85
CALR3Q96L12 Y_RNA.251-201ENST00000364551 99 ntBASIC3.48□□□□□ -1.85
CALR3Q96L12 SNORD17-201ENST00000390930 237 ntBASIC3.48□□□□□ -1.85
CALR3Q96L12 MIR887-201ENST00000401258 79 ntBASIC3.48□□□□□ -1.85
CALR3Q96L12 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.48□□□□□ -1.85
CALR3Q96L12 TRBV12-1-201ENST00000479785 344 ntBASIC3.48□□□□□ -1.85
CALR3Q96L12 RNU6-313P-201ENST00000516317 112 ntBASIC3.48□□□□□ -1.85
CALR3Q96L12 RNU1-95P-201ENST00000516357 160 ntBASIC3.48□□□□□ -1.85
CALR3Q96L12 RNU1-128P-201ENST00000516704 160 ntBASIC3.48□□□□□ -1.85
CALR3Q96L12 RNU6-971P-201ENST00000516920 106 ntBASIC3.48□□□□□ -1.85
CALR3Q96L12 IGKV2-26-201ENST00000518305 343 ntBASIC3.48□□□□□ -1.85
CALR3Q96L12 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.48□□□□□ -1.85
CALR3Q96L12 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CALR3Q96L12 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CALR3Q96L12 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CALR3Q96L12 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.47□□□□□ -1.85
CALR3Q96L12 MIR126-201ENST00000362291 85 ntBASIC3.47□□□□□ -1.85
CALR3Q96L12 RNA5SP479-201ENST00000364858 117 ntBASIC3.47□□□□□ -1.85
CALR3Q96L12 Y_RNA.486-201ENST00000384398 107 ntBASIC3.47□□□□□ -1.85
CALR3Q96L12 SNORA12.1-201ENST00000390873 148 ntBASIC3.47□□□□□ -1.85
CALR3Q96L12 RNU6-1154P-201ENST00000391001 104 ntBASIC3.47□□□□□ -1.85
CALR3Q96L12 RPL21P3-201ENST00000395517 478 ntBASIC3.47□□□□□ -1.85
CALR3Q96L12 RNA5SP229-201ENST00000410809 99 ntBASIC3.47□□□□□ -1.85
CALR3Q96L12 RNA5SP344-201ENST00000411081 104 ntBASIC3.47□□□□□ -1.85
CALR3Q96L12 CYCSP49-201ENST00000420810 319 ntBASIC3.47□□□□□ -1.85
CALR3Q96L12 RN7SL499P-201ENST00000481141 276 ntBASIC3.47□□□□□ -1.85
CALR3Q96L12 RNU2-56P-201ENST00000516826 190 ntBASIC3.47□□□□□ -1.85
CALR3Q96L12 RNU6-365P-201ENST00000517113 106 ntBASIC3.47□□□□□ -1.85
CALR3Q96L12 AP001328.1-201ENST00000528550 176 ntBASIC3.47□□□□□ -1.85
CALR3Q96L12 MIR3160-1-201ENST00000577972 85 ntBASIC3.47□□□□□ -1.85
CALR3Q96L12 AC087685.1-201ENST00000587507 141 ntBASIC3.47□□□□□ -1.85
CALR3Q96L12 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.47□□□□□ -1.85
CALR3Q96L12 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CALR3Q96L12 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CALR3Q96L12 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CALR3Q96L12 Y_RNA.242-201ENST00000364473 110 ntBASIC3.46□□□□□ -1.86
CALR3Q96L12 AL359837.1-201ENST00000381357 287 ntBASIC3.46□□□□□ -1.86
CALR3Q96L12 RNU6-1168P-201ENST00000390831 104 ntBASIC3.46□□□□□ -1.86
CALR3Q96L12 Y_RNA.584-201ENST00000391090 114 ntBASIC3.46□□□□□ -1.86
CALR3Q96L12 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.46□□□□□ -1.86
CALR3Q96L12 AC008267.6-201ENST00000441664 139 ntBASIC3.46□□□□□ -1.86
CALR3Q96L12 RNU6-1211P-201ENST00000459179 105 ntBASIC3.46□□□□□ -1.86
CALR3Q96L12 RN7SL807P-201ENST00000470923 297 ntBASIC3.46□□□□□ -1.86
CALR3Q96L12 MRPS17P9-201ENST00000511924 393 ntBASIC3.46□□□□□ -1.86
CALR3Q96L12 RNA5SP137-201ENST00000516833 135 ntBASIC3.46□□□□□ -1.86
CALR3Q96L12 AL591926.4-201ENST00000616895 298 ntBASIC3.46□□□□□ -1.86
CALR3Q96L12 RNA5SP119-201ENST00000362715 117 ntBASIC3.45□□□□□ -1.86
CALR3Q96L12 RNY1P11-201ENST00000363759 113 ntBASIC3.45□□□□□ -1.86
CALR3Q96L12 RNU6-1336P-201ENST00000383886 109 ntBASIC3.45□□□□□ -1.86
CALR3Q96L12 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CALR3Q96L12 MLLT10P1-201ENST00000418346 262 ntBASIC3.45□□□□□ -1.86
CALR3Q96L12 RPPH1-2P-201ENST00000516688 293 ntBASIC3.45□□□□□ -1.86
CALR3Q96L12 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.45□□□□□ -1.86
CALR3Q96L12 AL365222.1-201ENST00000614661 98 ntBASIC3.45□□□□□ -1.86
CALR3Q96L12 AC022513.1-201ENST00000624512 117 ntBASIC3.45□□□□□ -1.86
CALR3Q96L12 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.45□□□□□ -1.86
CALR3Q96L12 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CALR3Q96L12 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CALR3Q96L12 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CALR3Q96L12 SNORA5A-201ENST00000384111 134 ntBASIC3.44□□□□□ -1.86
CALR3Q96L12 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.44□□□□□ -1.86
CALR3Q96L12 RNA5SP492-201ENST00000411330 114 ntBASIC3.44□□□□□ -1.86
CALR3Q96L12 BX510359.4-201ENST00000423750 193 ntBASIC3.44□□□□□ -1.86
CALR3Q96L12 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.44□□□□□ -1.86
CALR3Q96L12 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.44□□□□□ -1.86
CALR3Q96L12 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.44□□□□□ -1.86
CALR3Q96L12 RN7SL297P-201ENST00000483161 293 ntBASIC3.44□□□□□ -1.86
CALR3Q96L12 AC008507.4-201ENST00000585464 127 ntBASIC3.44□□□□□ -1.86
CALR3Q96L12 VN1R85P-201ENST00000601587 426 ntBASIC3.44□□□□□ -1.86
CALR3Q96L12 AC011603.4-201ENST00000611325 277 ntBASIC3.44□□□□□ -1.86
CALR3Q96L12 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.44□□□□□ -1.86
CALR3Q96L12 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms