Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHFRQ96EP1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CHFRQ96EP1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CHFRQ96EP1 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.8□□□□□ -1.96
CHFRQ96EP1 Y_RNA.35-201ENST00000362601 101 ntBASIC2.8□□□□□ -1.96
CHFRQ96EP1 Y_RNA.243-201ENST00000364481 109 ntBASIC2.8□□□□□ -1.96
CHFRQ96EP1 Y_RNA.369-201ENST00000365568 117 ntBASIC2.8□□□□□ -1.96
CHFRQ96EP1 RNU6-1336P-201ENST00000383886 109 ntBASIC2.8□□□□□ -1.96
CHFRQ96EP1 MIR512-1-201ENST00000384913 84 ntBASIC2.8□□□□□ -1.96
CHFRQ96EP1 RNA5SP508-201ENST00000411327 119 ntBASIC2.8□□□□□ -1.96
CHFRQ96EP1 AC004866.1-201ENST00000411748 78 ntBASIC2.8□□□□□ -1.96
CHFRQ96EP1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.8□□□□□ -1.96
CHFRQ96EP1 AL513328.1-201ENST00000446460 224 ntBASIC2.8□□□□□ -1.96
CHFRQ96EP1 RPL39P29-201ENST00000447779 157 ntBASIC2.8□□□□□ -1.96
CHFRQ96EP1 AC027176.1-201ENST00000560204 514 ntBASIC2.8□□□□□ -1.96
CHFRQ96EP1 AL356575.1-201ENST00000603008 283 ntBASIC2.8□□□□□ -1.96
CHFRQ96EP1 MIR6817-201ENST00000615588 66 ntBASIC2.8□□□□□ -1.96
CHFRQ96EP1 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.8□□□□□ -1.96
CHFRQ96EP1 U6.95-201ENST00000636931 70 ntBASIC2.8□□□□□ -1.96
CHFRQ96EP1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.8□□□□□ -1.96
CHFRQ96EP1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CHFRQ96EP1 RNU6-1205P-201ENST00000363625 106 ntBASIC2.79□□□□□ -1.96
CHFRQ96EP1 SNORD87-201ENST00000364849 89 ntBASIC2.79□□□□□ -1.96
CHFRQ96EP1 RNU6-728P-201ENST00000365375 104 ntBASIC2.79□□□□□ -1.96
CHFRQ96EP1 RNU4-43P-201ENST00000410628 137 ntBASIC2.79□□□□□ -1.96
CHFRQ96EP1 RNA5SP504-201ENST00000410676 117 ntBASIC2.79□□□□□ -1.96
CHFRQ96EP1 NDUFS5P4-201ENST00000412983 318 ntBASIC2.79□□□□□ -1.96
CHFRQ96EP1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.79□□□□□ -1.96
CHFRQ96EP1 AC003982.1-202ENST00000469928 248 ntBASIC2.79□□□□□ -1.96
CHFRQ96EP1 AP004217.1-201ENST00000480579 346 ntBASIC2.79□□□□□ -1.96
CHFRQ96EP1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.79□□□□□ -1.96
CHFRQ96EP1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.79□□□□□ -1.96
CHFRQ96EP1 RNA5SP148-201ENST00000516527 94 ntBASIC2.79□□□□□ -1.96
CHFRQ96EP1 RNU6-107P-201ENST00000516643 102 ntBASIC2.79□□□□□ -1.96
CHFRQ96EP1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.79□□□□□ -1.96
CHFRQ96EP1 MIR5688-201ENST00000580619 83 ntBASIC2.79□□□□□ -1.96
CHFRQ96EP1 ZNF861P-201ENST00000588126 639 ntBASIC2.79□□□□□ -1.96
CHFRQ96EP1 U3.9-201ENST00000363823 204 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 Y_RNA.341-201ENST00000365341 102 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 Y_RNA.361-201ENST00000365515 120 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 RNU6-622P-201ENST00000384272 103 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 Y_RNA.495-201ENST00000384435 112 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 SNORD88.1-201ENST00000408684 91 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 MIR1302-4-201ENST00000408701 150 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 RNU6-855P-201ENST00000410395 104 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 RNU6-383P-201ENST00000410864 94 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.78□□□□□ -1.96
CHFRQ96EP1 AL158147.1-201ENST00000443970 75 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 AC104389.3-201ENST00000445629 235 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.78□□□□□ -1.96
CHFRQ96EP1 Y_RNA.651-201ENST00000459380 103 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 TRBV12-1-201ENST00000479785 344 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 RNU6-581P-201ENST00000516214 105 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 AC006199.1-201ENST00000548728 219 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 AC009163.5-201ENST00000575421 637 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 AC090897.2-201ENST00000581715 130 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 HMGN2P15-201ENST00000585707 270 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 AC120024.3-201ENST00000603167 156 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 AC068647.2-201ENST00000637380 353 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 AC008555.8-201ENST00000623602 2168 ntBASIC2.78□□□□□ -1.96
CHFRQ96EP1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.78□□□□□ -1.97
CHFRQ96EP1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.77□□□□□ -1.97
CHFRQ96EP1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CHFRQ96EP1 MIR450A1-201ENST00000362262 91 ntBASIC2.77□□□□□ -1.97
CHFRQ96EP1 RNU6-884P-201ENST00000363889 107 ntBASIC2.77□□□□□ -1.97
CHFRQ96EP1 SNORA20B-201ENST00000384220 132 ntBASIC2.77□□□□□ -1.97
CHFRQ96EP1 Y_RNA.456-201ENST00000384232 111 ntBASIC2.77□□□□□ -1.97
CHFRQ96EP1 MIR1261-201ENST00000408659 82 ntBASIC2.77□□□□□ -1.97
CHFRQ96EP1 MIR1278-201ENST00000408753 81 ntBASIC2.77□□□□□ -1.97
CHFRQ96EP1 RNU6-710P-201ENST00000410424 105 ntBASIC2.77□□□□□ -1.97
CHFRQ96EP1 CYP4A27P-201ENST00000567218 190 ntBASIC2.77□□□□□ -1.97
CHFRQ96EP1 AL031274.2-201ENST00000599419 203 ntBASIC2.77□□□□□ -1.97
CHFRQ96EP1 AL670379.3-201ENST00000605040 251 ntBASIC2.77□□□□□ -1.97
CHFRQ96EP1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CHFRQ96EP1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
CHFRQ96EP1 Z82209.1-201ENST00000422141 2135 ntBASIC2.77□□□□□ -1.97
CHFRQ96EP1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CHFRQ96EP1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.76□□□□□ -1.97
CHFRQ96EP1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.76□□□□□ -1.97
CHFRQ96EP1 U8.1-201ENST00000362843 134 ntBASIC2.76□□□□□ -1.97
CHFRQ96EP1 RNU6-597P-201ENST00000365620 102 ntBASIC2.76□□□□□ -1.97
CHFRQ96EP1 SNORD116-21-201ENST00000384507 92 ntBASIC2.76□□□□□ -1.97
CHFRQ96EP1 Y_RNA.584-201ENST00000391090 114 ntBASIC2.76□□□□□ -1.97
CHFRQ96EP1 MIR208B-201ENST00000401172 77 ntBASIC2.76□□□□□ -1.97
CHFRQ96EP1 RPS29P6-201ENST00000438196 145 ntBASIC2.76□□□□□ -1.97
CHFRQ96EP1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.76□□□□□ -1.97
CHFRQ96EP1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.76□□□□□ -1.97
CHFRQ96EP1 RNU7-26P-201ENST00000458980 63 ntBASIC2.76□□□□□ -1.97
CHFRQ96EP1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.76□□□□□ -1.97
CHFRQ96EP1 RPS27AP10-201ENST00000496103 208 ntBASIC2.76□□□□□ -1.97
CHFRQ96EP1 AC008413.1-201ENST00000511864 177 ntBASIC2.76□□□□□ -1.97
CHFRQ96EP1 MIR4724-201ENST00000579485 89 ntBASIC2.76□□□□□ -1.97
CHFRQ96EP1 AL356280.1-201ENST00000603614 379 ntBASIC2.76□□□□□ -1.97
CHFRQ96EP1 SNRPGP20-201ENST00000604477 205 ntBASIC2.76□□□□□ -1.97
CHFRQ96EP1 AL591926.4-201ENST00000616895 298 ntBASIC2.76□□□□□ -1.97
CHFRQ96EP1 U6.115-201ENST00000636045 103 ntBASIC2.76□□□□□ -1.97
CHFRQ96EP1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CHFRQ96EP1 SNORD73B-201ENST00000364394 72 ntBASIC2.75□□□□□ -1.97
CHFRQ96EP1 RNU6-1280P-201ENST00000365211 107 ntBASIC2.75□□□□□ -1.97
CHFRQ96EP1 CBX3P9-201ENST00000402326 552 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 1041 ms