Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC006435.5-201ENST00000624486 112 ntBASIC2.81□□□□□ -1.96
ERCC4Q92889 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.81□□□□□ -1.96
ERCC4Q92889 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ERCC4Q92889 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ERCC4Q92889 AC062016.1-201ENST00000355719 319 ntBASIC2.8□□□□□ -1.96
ERCC4Q92889 Y_RNA.172-201ENST00000363765 102 ntBASIC2.8□□□□□ -1.96
ERCC4Q92889 Y_RNA.341-201ENST00000365341 102 ntBASIC2.8□□□□□ -1.96
ERCC4Q92889 RNU6-438P-201ENST00000365561 103 ntBASIC2.8□□□□□ -1.96
ERCC4Q92889 AC123900.1-201ENST00000420390 96 ntBASIC2.8□□□□□ -1.96
ERCC4Q92889 RPS26P55-201ENST00000471178 356 ntBASIC2.8□□□□□ -1.96
ERCC4Q92889 AC074198.2-201ENST00000508153 258 ntBASIC2.8□□□□□ -1.96
ERCC4Q92889 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.8□□□□□ -1.96
ERCC4Q92889 MIR5694-201ENST00000581190 76 ntBASIC2.8□□□□□ -1.96
ERCC4Q92889 AC006023.1-201ENST00000603944 259 ntBASIC2.8□□□□□ -1.96
ERCC4Q92889 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
ERCC4Q92889 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ERCC4Q92889 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.79□□□□□ -1.96
ERCC4Q92889 MIR21-201ENST00000362134 72 ntBASIC2.79□□□□□ -1.96
ERCC4Q92889 RNU6-271P-201ENST00000363858 105 ntBASIC2.79□□□□□ -1.96
ERCC4Q92889 RNU6-899P-201ENST00000363947 107 ntBASIC2.79□□□□□ -1.96
ERCC4Q92889 RNU6-1048P-201ENST00000364054 107 ntBASIC2.79□□□□□ -1.96
ERCC4Q92889 MIR561-201ENST00000385216 97 ntBASIC2.79□□□□□ -1.96
ERCC4Q92889 RN7SKP51-201ENST00000410781 304 ntBASIC2.79□□□□□ -1.96
ERCC4Q92889 RPS20P10-201ENST00000451209 253 ntBASIC2.79□□□□□ -1.96
ERCC4Q92889 RPL36AP21-201ENST00000490372 323 ntBASIC2.79□□□□□ -1.96
ERCC4Q92889 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.79□□□□□ -1.96
ERCC4Q92889 MIR3162-201ENST00000581818 82 ntBASIC2.79□□□□□ -1.96
ERCC4Q92889 MIR4298-201ENST00000584380 73 ntBASIC2.79□□□□□ -1.96
ERCC4Q92889 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ERCC4Q92889 AC007336.1-201ENST00000576365 3828 ntBASIC2.79□□□□□ -1.96
ERCC4Q92889 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.79□□□□□ -1.96
ERCC4Q92889 RNU6-859P-201ENST00000362728 107 ntBASIC2.78□□□□□ -1.96
ERCC4Q92889 RNA5SP125-201ENST00000364843 120 ntBASIC2.78□□□□□ -1.96
ERCC4Q92889 RNU6-1072P-201ENST00000384703 107 ntBASIC2.78□□□□□ -1.96
ERCC4Q92889 RNU6-443P-201ENST00000384780 107 ntBASIC2.78□□□□□ -1.96
ERCC4Q92889 SNORA40.19-201ENST00000390846 128 ntBASIC2.78□□□□□ -1.96
ERCC4Q92889 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.78□□□□□ -1.96
ERCC4Q92889 AC108938.1-201ENST00000451204 136 ntBASIC2.78□□□□□ -1.96
ERCC4Q92889 CKS1BP2-201ENST00000497342 240 ntBASIC2.78□□□□□ -1.96
ERCC4Q92889 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.78□□□□□ -1.96
ERCC4Q92889 RNA5SP320-201ENST00000516263 124 ntBASIC2.78□□□□□ -1.96
ERCC4Q92889 RNU6-1337P-201ENST00000516525 95 ntBASIC2.78□□□□□ -1.96
ERCC4Q92889 RNU6-255P-201ENST00000516957 105 ntBASIC2.78□□□□□ -1.96
ERCC4Q92889 MRPS18CP4-201ENST00000535821 231 ntBASIC2.78□□□□□ -1.96
ERCC4Q92889 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.78□□□□□ -1.96
ERCC4Q92889 AL355297.2-201ENST00000604792 129 ntBASIC2.78□□□□□ -1.96
ERCC4Q92889 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ERCC4Q92889 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
ERCC4Q92889 RNU4-17P-201ENST00000365598 141 ntBASIC2.77□□□□□ -1.97
ERCC4Q92889 Y_RNA.571-201ENST00000384753 98 ntBASIC2.77□□□□□ -1.97
ERCC4Q92889 MIR524-201ENST00000385242 87 ntBASIC2.77□□□□□ -1.97
ERCC4Q92889 AC008134.1-201ENST00000420943 193 ntBASIC2.77□□□□□ -1.97
ERCC4Q92889 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.77□□□□□ -1.97
ERCC4Q92889 RNU7-141P-201ENST00000459304 62 ntBASIC2.77□□□□□ -1.97
ERCC4Q92889 UBE2DNL-203ENST00000474922 222 ntBASIC2.77□□□□□ -1.97
ERCC4Q92889 Y_RNA.662-201ENST00000516028 97 ntBASIC2.77□□□□□ -1.97
ERCC4Q92889 RNU6-1219P-201ENST00000516143 112 ntBASIC2.77□□□□□ -1.97
ERCC4Q92889 RNU6-856P-201ENST00000516959 98 ntBASIC2.77□□□□□ -1.97
ERCC4Q92889 MIR203B-201ENST00000636080 86 ntBASIC2.77□□□□□ -1.97
ERCC4Q92889 AC134026.1-201ENST00000623249 2239 ntBASIC2.77□□□□□ -1.97
ERCC4Q92889 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.77□□□□□ -1.97
ERCC4Q92889 Y_RNA.7-201ENST00000362352 102 ntBASIC2.76□□□□□ -1.97
ERCC4Q92889 Y_RNA.121-201ENST00000363309 113 ntBASIC2.76□□□□□ -1.97
ERCC4Q92889 SNORA38-201ENST00000363946 132 ntBASIC2.76□□□□□ -1.97
ERCC4Q92889 RNU6-1240P-201ENST00000365155 104 ntBASIC2.76□□□□□ -1.97
ERCC4Q92889 RNU6-117P-201ENST00000365415 107 ntBASIC2.76□□□□□ -1.97
ERCC4Q92889 RNU6-381P-201ENST00000391259 108 ntBASIC2.76□□□□□ -1.97
ERCC4Q92889 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.76□□□□□ -1.97
ERCC4Q92889 AL109933.2-201ENST00000452651 260 ntBASIC2.76□□□□□ -1.97
ERCC4Q92889 RNU6-991P-201ENST00000516168 107 ntBASIC2.76□□□□□ -1.97
ERCC4Q92889 MIR4672-201ENST00000583126 81 ntBASIC2.76□□□□□ -1.97
ERCC4Q92889 AC004832.4-201ENST00000608952 331 ntBASIC2.76□□□□□ -1.97
ERCC4Q92889 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
ERCC4Q92889 Y_RNA.441-201ENST00000384123 112 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 SNORD116-13-201ENST00000384408 92 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 MIR626-201ENST00000385032 94 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 MTCO2P33-201ENST00000402100 465 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.75□□□□□ -1.97
ERCC4Q92889 AC096725.1-201ENST00000514266 313 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 RNA5SP20-201ENST00000515976 84 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 RNU6-667P-201ENST00000517186 102 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 MIR5688-201ENST00000580619 83 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 AC013412.1-201ENST00000610687 192 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 U2.15-201ENST00000611544 191 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 U2.16-201ENST00000613119 191 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 U2.12-201ENST00000613778 191 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 U2.20-201ENST00000613956 192 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 U2.9-201ENST00000615427 191 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 U2.11-201ENST00000616345 191 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 U2.2-201ENST00000616535 191 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 U2.3-201ENST00000617785 191 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 U4atac.1-201ENST00000618345 95 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 U2.19-201ENST00000618602 191 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 RNU2-1-201ENST00000618664 191 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 U2.6-201ENST00000619225 191 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 U2.5-201ENST00000619465 191 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 U2.10-201ENST00000620268 191 ntBASIC2.75□□□□□ -1.97
ERCC4Q92889 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ERCC4Q92889 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ERCC4Q92889 RNA5SP456-201ENST00000364002 114 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 289.5 ms