Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AL731563.1-201ENST00000442202 214 ntBASIC1.85□□□□□ -2.11
SLC44A1Q8WWI5 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.85□□□□□ -2.11
SLC44A1Q8WWI5 AC005042.3-201ENST00000453230 174 ntBASIC1.85□□□□□ -2.11
SLC44A1Q8WWI5 RNU6-327P-201ENST00000516270 127 ntBASIC1.85□□□□□ -2.11
SLC44A1Q8WWI5 RNU6-1046P-201ENST00000516538 107 ntBASIC1.85□□□□□ -2.11
SLC44A1Q8WWI5 AL117187.1-201ENST00000555482 181 ntBASIC1.85□□□□□ -2.11
SLC44A1Q8WWI5 AC008737.2-201ENST00000599446 118 ntBASIC1.85□□□□□ -2.11
SLC44A1Q8WWI5 AC136443.5-201ENST00000603741 370 ntBASIC1.85□□□□□ -2.11
SLC44A1Q8WWI5 AC011373.1-201ENST00000607270 237 ntBASIC1.85□□□□□ -2.11
SLC44A1Q8WWI5 U1.36-201ENST00000620684 176 ntBASIC1.85□□□□□ -2.11
SLC44A1Q8WWI5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SLC44A1Q8WWI5 RNU6-271P-201ENST00000363858 105 ntBASIC1.84□□□□□ -2.11
SLC44A1Q8WWI5 SNORD48-201ENST00000364953 64 ntBASIC1.84□□□□□ -2.11
SLC44A1Q8WWI5 SNORA20B-201ENST00000384220 132 ntBASIC1.84□□□□□ -2.11
SLC44A1Q8WWI5 MIR873-201ENST00000401120 77 ntBASIC1.84□□□□□ -2.11
SLC44A1Q8WWI5 ELOCP20-201ENST00000422460 345 ntBASIC1.84□□□□□ -2.11
SLC44A1Q8WWI5 RPL31P63-201ENST00000422565 375 ntBASIC1.84□□□□□ -2.11
SLC44A1Q8WWI5 MTND2P23-201ENST00000422990 651 ntBASIC1.84□□□□□ -2.11
SLC44A1Q8WWI5 AC099677.2-201ENST00000436385 175 ntBASIC1.84□□□□□ -2.11
SLC44A1Q8WWI5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.84□□□□□ -2.11
SLC44A1Q8WWI5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.84□□□□□ -2.11
SLC44A1Q8WWI5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.84□□□□□ -2.11
SLC44A1Q8WWI5 RNU6-1045P-201ENST00000516321 107 ntBASIC1.84□□□□□ -2.11
SLC44A1Q8WWI5 MIR4419B-201ENST00000577260 68 ntBASIC1.84□□□□□ -2.11
SLC44A1Q8WWI5 SNORD113-5-201ENST00000607261 78 ntBASIC1.84□□□□□ -2.11
SLC44A1Q8WWI5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.84□□□□□ -2.11
SLC44A1Q8WWI5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SLC44A1Q8WWI5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
SLC44A1Q8WWI5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
SLC44A1Q8WWI5 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 SNORA27.1-201ENST00000362604 124 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 RNU1-96P-201ENST00000364163 162 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 RNU6-1109P-201ENST00000391187 107 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 RNU6-121P-201ENST00000410525 99 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 RNA5SP501-201ENST00000410990 112 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 AL118496.2-201ENST00000448300 230 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 RPL23AP3-201ENST00000453844 468 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 LINC01399-202ENST00000458450 244 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 SEPT14P8-201ENST00000508026 178 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 AC107393.1-201ENST00000512403 346 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 RNU6-155P-201ENST00000516347 100 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 RNU6-966P-201ENST00000516479 104 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 RNU7-110P-201ENST00000516891 62 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 AC024995.1-201ENST00000523014 93 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 AL137100.2-201ENST00000555786 315 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 AC024614.2-201ENST00000577584 372 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 U6.73-201ENST00000619194 103 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 AC092881.1-201ENST00000638218 2733 ntBASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SLC44A1Q8WWI5 AL356292.1-201ENST00000283110 373 ntBASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 Y_RNA.19-201ENST00000362462 99 ntBASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 RNU6-862P-201ENST00000362804 105 ntBASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 Y_RNA.105-201ENST00000363182 111 ntBASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 Y_RNA.331-201ENST00000365267 102 ntBASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 RNU6-21P-201ENST00000384710 107 ntBASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 RNU6-417P-201ENST00000384712 107 ntBASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 MIR764-201ENST00000390811 85 ntBASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 Y_RNA.581-201ENST00000391017 97 ntBASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 AL358176.2-201ENST00000425769 204 ntBASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 AL591806.2-201ENST00000433122 173 ntBASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 MRPS10P1-201ENST00000448483 130 ntBASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 MIR4299-201ENST00000577899 72 ntBASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 AC005034.5-201ENST00000604219 466 ntBASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 AC069114.2-201ENST00000604699 304 ntBASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 AC127459.3-201ENST00000624328 466 ntBASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SLC44A1Q8WWI5 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.81□□□□□ -2.12
SLC44A1Q8WWI5 SNORD113-8-201ENST00000363497 74 ntBASIC1.81□□□□□ -2.12
SLC44A1Q8WWI5 Y_RNA.222-201ENST00000364264 102 ntBASIC1.81□□□□□ -2.12
SLC44A1Q8WWI5 AL031003.1-201ENST00000404229 172 ntBASIC1.81□□□□□ -2.12
SLC44A1Q8WWI5 AC010154.1-201ENST00000425857 269 ntBASIC1.81□□□□□ -2.12
SLC44A1Q8WWI5 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.81□□□□□ -2.12
SLC44A1Q8WWI5 RPL23AP6-201ENST00000446637 472 ntBASIC1.81□□□□□ -2.12
SLC44A1Q8WWI5 RPS26P45-201ENST00000471748 340 ntBASIC1.81□□□□□ -2.12
SLC44A1Q8WWI5 SNORA70.12-201ENST00000516084 153 ntBASIC1.81□□□□□ -2.12
SLC44A1Q8WWI5 RNU6-496P-201ENST00000516145 99 ntBASIC1.81□□□□□ -2.12
SLC44A1Q8WWI5 RNVU1-2-201ENST00000516326 135 ntBASIC1.81□□□□□ -2.12
SLC44A1Q8WWI5 MIR4769-201ENST00000584126 77 ntBASIC1.81□□□□□ -2.12
SLC44A1Q8WWI5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
SLC44A1Q8WWI5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
SLC44A1Q8WWI5 RNU4-90P-201ENST00000362773 141 ntBASIC1.8□□□□□ -2.12
SLC44A1Q8WWI5 SNORD81.1-201ENST00000363064 77 ntBASIC1.8□□□□□ -2.12
SLC44A1Q8WWI5 RNU4-30P-201ENST00000410245 143 ntBASIC1.8□□□□□ -2.12
SLC44A1Q8WWI5 RNU2-61P-201ENST00000411069 191 ntBASIC1.8□□□□□ -2.12
SLC44A1Q8WWI5 AL158823.1-201ENST00000418441 478 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms