Protein–RNA interactions for Protein: Q8TEQ0

SNX29, Sorting nexin-29, humanhuman

Predictions only

Length 813 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29Q8TEQ0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.38□□□□□ -1.87
SNX29Q8TEQ0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SNX29Q8TEQ0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.38□□□□□ -1.87
SNX29Q8TEQ0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.37□□□□□ -1.87
SNX29Q8TEQ0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SNX29Q8TEQ0 MIR422A-201ENST00000362286 90 ntBASIC3.37□□□□□ -1.87
SNX29Q8TEQ0 SNORA25.7-201ENST00000364375 127 ntBASIC3.37□□□□□ -1.87
SNX29Q8TEQ0 SNORA71.1-201ENST00000364523 117 ntBASIC3.37□□□□□ -1.87
SNX29Q8TEQ0 SNORD21-201ENST00000383953 95 ntBASIC3.37□□□□□ -1.87
SNX29Q8TEQ0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SNX29Q8TEQ0 SNORA48.8-201ENST00000391324 134 ntBASIC3.37□□□□□ -1.87
SNX29Q8TEQ0 AC244505.4-201ENST00000434905 287 ntBASIC3.37□□□□□ -1.87
SNX29Q8TEQ0 SSXP5-201ENST00000443473 287 ntBASIC3.37□□□□□ -1.87
SNX29Q8TEQ0 snoU13.22-201ENST00000459428 104 ntBASIC3.37□□□□□ -1.87
SNX29Q8TEQ0 RN7SL75P-201ENST00000461926 281 ntBASIC3.37□□□□□ -1.87
SNX29Q8TEQ0 RN7SL633P-201ENST00000488974 297 ntBASIC3.37□□□□□ -1.87
SNX29Q8TEQ0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SNX29Q8TEQ0 SNORD77.4-201ENST00000516158 81 ntBASIC3.37□□□□□ -1.87
SNX29Q8TEQ0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
SNX29Q8TEQ0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.37□□□□□ -1.87
SNX29Q8TEQ0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
SNX29Q8TEQ0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.36□□□□□ -1.87
SNX29Q8TEQ0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.36□□□□□ -1.87
SNX29Q8TEQ0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.36□□□□□ -1.87
SNX29Q8TEQ0 RNU6-978P-201ENST00000364371 103 ntBASIC3.36□□□□□ -1.87
SNX29Q8TEQ0 RNU6-215P-201ENST00000365169 102 ntBASIC3.36□□□□□ -1.87
SNX29Q8TEQ0 Y_RNA.333-201ENST00000365274 102 ntBASIC3.36□□□□□ -1.87
SNX29Q8TEQ0 RPL21P3-201ENST00000395517 478 ntBASIC3.36□□□□□ -1.87
SNX29Q8TEQ0 SNORD11-201ENST00000459124 84 ntBASIC3.36□□□□□ -1.87
SNX29Q8TEQ0 RNU6-1096P-201ENST00000517089 102 ntBASIC3.36□□□□□ -1.87
SNX29Q8TEQ0 AL160236.1-201ENST00000556317 195 ntBASIC3.36□□□□□ -1.87
SNX29Q8TEQ0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX29Q8TEQ0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.36□□□□□ -1.87
SNX29Q8TEQ0 U2.20-201ENST00000613956 192 ntBASIC3.36□□□□□ -1.87
SNX29Q8TEQ0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.36□□□□□ -1.87
SNX29Q8TEQ0 U6.73-201ENST00000619194 103 ntBASIC3.36□□□□□ -1.87
SNX29Q8TEQ0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SNX29Q8TEQ0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNX29Q8TEQ0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.36□□□□□ -1.87
SNX29Q8TEQ0 Y_RNA.111-201ENST00000363248 100 ntBASIC3.35□□□□□ -1.87
SNX29Q8TEQ0 RNU6-1186P-201ENST00000410429 97 ntBASIC3.35□□□□□ -1.87
SNX29Q8TEQ0 EEF1B2P7-201ENST00000451177 676 ntBASIC3.35□□□□□ -1.87
SNX29Q8TEQ0 RNA5SP341-201ENST00000516261 117 ntBASIC3.35□□□□□ -1.87
SNX29Q8TEQ0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.35□□□□□ -1.87
SNX29Q8TEQ0 AC073413.2-201ENST00000604332 360 ntBASIC3.35□□□□□ -1.87
SNX29Q8TEQ0 JPX_2.1-201ENST00000614161 69 ntBASIC3.35□□□□□ -1.87
SNX29Q8TEQ0 AC110774.1-201ENST00000623567 2018 ntBASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 MIR340-201ENST00000362125 95 ntBASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 Y_RNA.91-201ENST00000363042 107 ntBASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 RNU6-1209P-201ENST00000363655 107 ntBASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 Y_RNA.796-201ENST00000364268 102 ntBASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 Y_RNA.799-201ENST00000364992 102 ntBASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 RNU2-48P-201ENST00000410694 191 ntBASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 Y_RNA.621-201ENST00000411065 96 ntBASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 AC060773.1-201ENST00000421698 310 ntBASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 RNU6-1146P-201ENST00000516282 102 ntBASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 RNU6-659P-201ENST00000516454 104 ntBASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 RNA5SP153-201ENST00000516498 76 ntBASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 RNU6-667P-201ENST00000517186 102 ntBASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 SNORA70.24-201ENST00000517233 118 ntBASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.34□□□□□ -1.87
SNX29Q8TEQ0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SNX29Q8TEQ0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.34□□□□□ -1.88
SNX29Q8TEQ0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SNX29Q8TEQ0 AC093831.2-201ENST00000624393 3427 ntBASIC3.33□□□□□ -1.88
SNX29Q8TEQ0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SNX29Q8TEQ0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNX29Q8TEQ0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.33□□□□□ -1.88
SNX29Q8TEQ0 MIR520G-201ENST00000385064 90 ntBASIC3.33□□□□□ -1.88
SNX29Q8TEQ0 RNU6-220P-201ENST00000390919 107 ntBASIC3.33□□□□□ -1.88
SNX29Q8TEQ0 AC063976.3-201ENST00000426849 329 ntBASIC3.33□□□□□ -1.88
SNX29Q8TEQ0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.33□□□□□ -1.88
SNX29Q8TEQ0 RNU7-107P-201ENST00000459121 61 ntBASIC3.33□□□□□ -1.88
SNX29Q8TEQ0 RN7SKP179-201ENST00000516126 217 ntBASIC3.33□□□□□ -1.88
SNX29Q8TEQ0 RN7SKP43-201ENST00000516173 320 ntBASIC3.33□□□□□ -1.88
SNX29Q8TEQ0 AL162274.2-201ENST00000614406 332 ntBASIC3.33□□□□□ -1.88
SNX29Q8TEQ0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.33□□□□□ -1.88
SNX29Q8TEQ0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNX29Q8TEQ0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.33□□□□□ -1.88
SNX29Q8TEQ0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SNX29Q8TEQ0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SNX29Q8TEQ0 snoU2-30.2-201ENST00000362805 70 ntBASIC3.32□□□□□ -1.88
SNX29Q8TEQ0 Y_RNA.634-201ENST00000364811 113 ntBASIC3.32□□□□□ -1.88
SNX29Q8TEQ0 MIR562-201ENST00000384894 95 ntBASIC3.32□□□□□ -1.88
SNX29Q8TEQ0 MIR592-201ENST00000384959 97 ntBASIC3.32□□□□□ -1.88
SNX29Q8TEQ0 MIR561-201ENST00000385216 97 ntBASIC3.32□□□□□ -1.88
SNX29Q8TEQ0 RPS15AP28-201ENST00000435088 386 ntBASIC3.32□□□□□ -1.88
SNX29Q8TEQ0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.32□□□□□ -1.88
SNX29Q8TEQ0 AC011406.1-201ENST00000512440 370 ntBASIC3.32□□□□□ -1.88
SNX29Q8TEQ0 Y_RNA.757-201ENST00000578934 114 ntBASIC3.32□□□□□ -1.88
SNX29Q8TEQ0 MIR4325-201ENST00000583049 90 ntBASIC3.32□□□□□ -1.88
SNX29Q8TEQ0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SNX29Q8TEQ0 AL035425.3-201ENST00000564206 4996 ntBASIC3.32□□□□□ -1.88
SNX29Q8TEQ0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
SNX29Q8TEQ0 Y_RNA.294-201ENST00000364916 102 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms