Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-3Q8TAU0 RNU6-832P-201ENST00000363319 107 ntBASIC4.22□□□□□ -1.73
NKX2-3Q8TAU0 MIR518F-201ENST00000384973 87 ntBASIC4.22□□□□□ -1.73
NKX2-3Q8TAU0 AC023141.4-201ENST00000412031 328 ntBASIC4.22□□□□□ -1.73
NKX2-3Q8TAU0 U3.44-201ENST00000458938 192 ntBASIC4.22□□□□□ -1.73
NKX2-3Q8TAU0 RNU7-14P-201ENST00000459331 62 ntBASIC4.22□□□□□ -1.73
NKX2-3Q8TAU0 MIR3683-201ENST00000580847 82 ntBASIC4.22□□□□□ -1.73
NKX2-3Q8TAU0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.22□□□□□ -1.73
NKX2-3Q8TAU0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.21□□□□□ -1.73
NKX2-3Q8TAU0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
NKX2-3Q8TAU0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 SNORA2.2-201ENST00000365473 135 ntBASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 RPL32P35-201ENST00000415214 394 ntBASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 AL513477.1-202ENST00000417061 214 ntBASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 AC009238.1-201ENST00000442165 424 ntBASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 AC009237.6-201ENST00000446969 424 ntBASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 RN7SL429P-201ENST00000479090 223 ntBASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 AC025518.1-201ENST00000479856 347 ntBASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 RN7SL489P-201ENST00000486185 223 ntBASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 RN7SL327P-201ENST00000488659 223 ntBASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 RPS29P21-201ENST00000496272 170 ntBASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 RNU6-795P-201ENST00000516323 103 ntBASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 MIR2114-201ENST00000516645 80 ntBASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 MIR4325-201ENST00000583049 90 ntBASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 RN7SL853P-201ENST00000617250 223 ntBASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 FAS-AS1.2-201ENST00000620386 170 ntBASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-3Q8TAU0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 Y_RNA.454-201ENST00000384224 113 ntBASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 Y_RNA.531-201ENST00000384589 121 ntBASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 MIR3074-201ENST00000384885 81 ntBASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 SNRPGP10-201ENST00000432323 225 ntBASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 HMGN1P7-201ENST00000491722 313 ntBASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 RNU6-267P-201ENST00000516714 103 ntBASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 RNU7-172P-201ENST00000517125 64 ntBASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 AC022523.2-201ENST00000561045 150 ntBASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 MIR4305-201ENST00000583252 102 ntBASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 AC087685.1-201ENST00000587507 141 ntBASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX2-3Q8TAU0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 Y_RNA.190-201ENST00000363964 101 ntBASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 RNU6-60P-201ENST00000364792 103 ntBASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 RNU6-1235P-201ENST00000384559 107 ntBASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 MIR520G-201ENST00000385064 90 ntBASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 MIR147B-201ENST00000390185 80 ntBASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 SNORD17-201ENST00000390930 237 ntBASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 BTF3P4-201ENST00000418852 495 ntBASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 AC016717.1-201ENST00000448918 286 ntBASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 RNU1-131P-201ENST00000458943 161 ntBASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 RNU6-498P-201ENST00000459468 107 ntBASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 EIF4BP1-201ENST00000554881 351 ntBASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 OTUD4P1-201ENST00000237841 3067 ntBASIC4.19□□□□□ -1.74
NKX2-3Q8TAU0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 RNU6-1189P-201ENST00000383958 107 ntBASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 MIR577-201ENST00000385196 96 ntBASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 AL138878.1-201ENST00000405131 347 ntBASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 RNU2-49P-201ENST00000410666 184 ntBASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 Y_RNA.620-201ENST00000411009 88 ntBASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 AC099677.2-201ENST00000436385 175 ntBASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 AC010099.1-201ENST00000455434 375 ntBASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 AP002884.2-201ENST00000471647 395 ntBASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 AC113410.1-201ENST00000505029 247 ntBASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 RNU7-6P-201ENST00000516845 62 ntBASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 RNU6-1231P-201ENST00000517185 103 ntBASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 MIR4438-201ENST00000585271 93 ntBASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 AL359075.3-201ENST00000613288 217 ntBASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.18□□□□□ -1.74
NKX2-3Q8TAU0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.17□□□□□ -1.74
NKX2-3Q8TAU0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-3Q8TAU0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
NKX2-3Q8TAU0 RNU4-35P-201ENST00000362588 141 ntBASIC4.17□□□□□ -1.74
NKX2-3Q8TAU0 RNU6-363P-201ENST00000362895 105 ntBASIC4.17□□□□□ -1.74
NKX2-3Q8TAU0 RNU6-418P-201ENST00000384035 107 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms