Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RNU6-524P-201ENST00000384270 107 ntBASIC3.72□□□□□ -1.81
NPAS3Q8IXF0 AC233266.1-201ENST00000454518 96 ntBASIC3.72□□□□□ -1.81
NPAS3Q8IXF0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPAS3Q8IXF0 HMGN1P7-201ENST00000491722 313 ntBASIC3.72□□□□□ -1.81
NPAS3Q8IXF0 AC093259.1-201ENST00000509755 300 ntBASIC3.72□□□□□ -1.81
NPAS3Q8IXF0 RNU6-1073P-201ENST00000517182 106 ntBASIC3.72□□□□□ -1.81
NPAS3Q8IXF0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.72□□□□□ -1.81
NPAS3Q8IXF0 HMGN2P15-201ENST00000585707 270 ntBASIC3.72□□□□□ -1.81
NPAS3Q8IXF0 AC020914.4-201ENST00000597690 277 ntBASIC3.72□□□□□ -1.81
NPAS3Q8IXF0 AC242852.1-201ENST00000612151 96 ntBASIC3.72□□□□□ -1.81
NPAS3Q8IXF0 AC244015.1-201ENST00000622301 99 ntBASIC3.72□□□□□ -1.81
NPAS3Q8IXF0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPAS3Q8IXF0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPAS3Q8IXF0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
NPAS3Q8IXF0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
NPAS3Q8IXF0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 MIR342-201ENST00000362212 99 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 SNORD115-19-201ENST00000363098 82 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 SNORD115-18-201ENST00000363293 82 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 SNORD115-17-201ENST00000364612 82 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 Y_RNA.410-201ENST00000383992 113 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 MIR634-201ENST00000385208 97 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 SNORA48.2-201ENST00000390926 124 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 SNORD17-201ENST00000390930 237 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 MIR300-201ENST00000401138 83 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 MIR548O-201ENST00000408583 114 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 AC010401.1-201ENST00000463867 348 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 SCGB1D5P-201ENST00000515134 247 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 MIR2114-201ENST00000516645 80 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 SNORD36C-201ENST00000516733 66 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 MIR3683-201ENST00000580847 82 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 RPL17P51-201ENST00000605218 238 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 U4.6-201ENST00000621618 127 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 AC006435.5-201ENST00000624486 112 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 AC008163.1-202ENST00000636004 2889 ntBASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NPAS3Q8IXF0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 FAM35BP-202ENST00000497389 3337 ntBASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 RNU6-743P-201ENST00000364151 106 ntBASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 RNU1-96P-201ENST00000364163 162 ntBASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 Y_RNA.253-201ENST00000364562 112 ntBASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 Y_RNA.351-201ENST00000365436 96 ntBASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 MIR1183-201ENST00000408856 89 ntBASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 RNA5SP239-201ENST00000410218 129 ntBASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 AL512326.2-201ENST00000426359 151 ntBASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 U3.44-201ENST00000458938 192 ntBASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NPAS3Q8IXF0 AC006504.1-201ENST00000562493 3666 ntBASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 SNORA38.1-201ENST00000364172 131 ntBASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 RNU6-1201P-201ENST00000384227 107 ntBASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 MIR128-1-201ENST00000384921 82 ntBASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 MIR802-201ENST00000390235 94 ntBASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 HMGN2P8-201ENST00000391458 268 ntBASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 AC016909.1-201ENST00000415916 166 ntBASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 SNX2P2-201ENST00000424553 323 ntBASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 AC112771.1-201ENST00000463581 102 ntBASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 RPS23P4-201ENST00000487908 423 ntBASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 AC023141.12-201ENST00000512399 199 ntBASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 AC110741.2-201ENST00000605278 268 ntBASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 AC103810.7-201ENST00000607821 91 ntBASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 MIR8057-201ENST00000620957 69 ntBASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.69□□□□□ -1.82
NPAS3Q8IXF0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPAS3Q8IXF0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NPAS3Q8IXF0 RNU6-438P-201ENST00000365561 103 ntBASIC3.68□□□□□ -1.82
NPAS3Q8IXF0 RNU6-987P-201ENST00000384759 104 ntBASIC3.68□□□□□ -1.82
NPAS3Q8IXF0 SNORA59A-201ENST00000459326 152 ntBASIC3.68□□□□□ -1.82
NPAS3Q8IXF0 RNU7-25P-201ENST00000516544 62 ntBASIC3.68□□□□□ -1.82
NPAS3Q8IXF0 SNORA18.7-201ENST00000516910 131 ntBASIC3.68□□□□□ -1.82
NPAS3Q8IXF0 MIR7112-201ENST00000616126 65 ntBASIC3.68□□□□□ -1.82
NPAS3Q8IXF0 AP003355.3-201ENST00000623465 114 ntBASIC3.68□□□□□ -1.82
NPAS3Q8IXF0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.68□□□□□ -1.82
NPAS3Q8IXF0 FAM35DP-201ENST00000323387 2712 ntBASIC3.68□□□□□ -1.82
NPAS3Q8IXF0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPAS3Q8IXF0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPAS3Q8IXF0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NPAS3Q8IXF0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms