Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.57□□□□□ -2
VRK3Q8IV63 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.57□□□□□ -2
VRK3Q8IV63 RPS27P1-201ENST00000450552 247 ntBASIC2.57□□□□□ -2
VRK3Q8IV63 Y_RNA.686-201ENST00000516548 134 ntBASIC2.57□□□□□ -2
VRK3Q8IV63 AC127455.1-201ENST00000565496 145 ntBASIC2.57□□□□□ -2
VRK3Q8IV63 MIR6844-201ENST00000637122 62 ntBASIC2.57□□□□□ -2
VRK3Q8IV63 AC068647.2-201ENST00000637380 353 ntBASIC2.57□□□□□ -2
VRK3Q8IV63 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VRK3Q8IV63 AC009487.4-201ENST00000624969 3585 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 RNU6-859P-201ENST00000362728 107 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 VTRNA1-1-201ENST00000363120 99 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 SNORA5B-201ENST00000363786 132 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 RNU6-597P-201ENST00000365620 102 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
VRK3Q8IV63 RNU6-460P-201ENST00000391158 108 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 MIR1283-1-201ENST00000408494 87 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 RN7SKP101-201ENST00000411376 320 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.56□□□□□ -2
VRK3Q8IV63 HSPE1P21-201ENST00000438283 308 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 SNRPGP8-201ENST00000454064 226 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 SNORD65B-201ENST00000459126 73 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 RNU7-57P-201ENST00000459540 60 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 RNU6-221P-201ENST00000459541 99 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 RPS26P55-201ENST00000471178 356 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 AC010598.1-201ENST00000510378 103 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 RNU5F-4P-201ENST00000516581 114 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
VRK3Q8IV63 AC008739.2-201ENST00000597006 317 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 RPL30P11-203ENST00000598995 310 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
VRK3Q8IV63 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.56□□□□□ -2
VRK3Q8IV63 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
VRK3Q8IV63 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.56□□□□□ -2
VRK3Q8IV63 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.56□□□□□ -2
VRK3Q8IV63 Z82195.2-201ENST00000612348 18351 ntBASIC2.55□□□□□ -2
VRK3Q8IV63 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
VRK3Q8IV63 SNORA14A-201ENST00000364773 135 ntBASIC2.55□□□□□ -2
VRK3Q8IV63 RNU6-1325P-201ENST00000364905 105 ntBASIC2.55□□□□□ -2
VRK3Q8IV63 SNORD116-13-201ENST00000384408 92 ntBASIC2.55□□□□□ -2
VRK3Q8IV63 Z98742.2-201ENST00000431564 187 ntBASIC2.55□□□□□ -2
VRK3Q8IV63 RNU7-116P-201ENST00000516940 62 ntBASIC2.55□□□□□ -2
VRK3Q8IV63 AL021707.8-201ENST00000609428 183 ntBASIC2.55□□□□□ -2
VRK3Q8IV63 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VRK3Q8IV63 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
VRK3Q8IV63 RNU6-271P-201ENST00000363858 105 ntBASIC2.54□□□□□ -2
VRK3Q8IV63 RNU6-975P-201ENST00000384296 105 ntBASIC2.54□□□□□ -2
VRK3Q8IV63 MIR518C-201ENST00000384822 101 ntBASIC2.54□□□□□ -2
VRK3Q8IV63 RNA5SP496-201ENST00000391240 109 ntBASIC2.54□□□□□ -2
VRK3Q8IV63 SNORA75.5-201ENST00000391291 81 ntBASIC2.54□□□□□ -2
VRK3Q8IV63 RNU6-588P-201ENST00000410281 105 ntBASIC2.54□□□□□ -2
VRK3Q8IV63 RNA5SP492-201ENST00000411330 114 ntBASIC2.54□□□□□ -2
VRK3Q8IV63 AC063976.3-201ENST00000426849 329 ntBASIC2.54□□□□□ -2
VRK3Q8IV63 AL109933.2-201ENST00000452651 260 ntBASIC2.54□□□□□ -2
VRK3Q8IV63 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.54□□□□□ -2
VRK3Q8IV63 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.54□□□□□ -2
VRK3Q8IV63 RNA5SP282-201ENST00000516355 108 ntBASIC2.54□□□□□ -2
VRK3Q8IV63 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.54□□□□□ -2
VRK3Q8IV63 AC005972.2-201ENST00000604690 348 ntBASIC2.54□□□□□ -2
VRK3Q8IV63 U7.2-201ENST00000607576 63 ntBASIC2.54□□□□□ -2
VRK3Q8IV63 snoZ196.1-201ENST00000625269 89 ntBASIC2.54□□□□□ -2
VRK3Q8IV63 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.54□□□□□ -2
VRK3Q8IV63 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VRK3Q8IV63 MAPK10-322ENST00000641485 4530 ntBASIC2.54□□□□□ -2
VRK3Q8IV63 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VRK3Q8IV63 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VRK3Q8IV63 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
VRK3Q8IV63 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.53□□□□□ -2
VRK3Q8IV63 SNORD45.3-201ENST00000363836 72 ntBASIC2.53□□□□□ -2
VRK3Q8IV63 RNU6-1180P-201ENST00000364935 107 ntBASIC2.53□□□□□ -2
VRK3Q8IV63 Y_RNA.521-201ENST00000384560 114 ntBASIC2.53□□□□□ -2
VRK3Q8IV63 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.53□□□□□ -2
VRK3Q8IV63 AC010531.2-201ENST00000465012 153 ntBASIC2.53□□□□□ -2
VRK3Q8IV63 RPS27P26-201ENST00000494583 239 ntBASIC2.53□□□□□ -2
VRK3Q8IV63 AC096725.1-201ENST00000514266 313 ntBASIC2.53□□□□□ -2
VRK3Q8IV63 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.53□□□□□ -2
VRK3Q8IV63 AP001328.1-201ENST00000528550 176 ntBASIC2.53□□□□□ -2
VRK3Q8IV63 AL160236.1-201ENST00000556317 195 ntBASIC2.53□□□□□ -2
VRK3Q8IV63 AC103810.1-201ENST00000579873 453 ntBASIC2.53□□□□□ -2
VRK3Q8IV63 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.53□□□□□ -2
VRK3Q8IV63 POLR3GP1-201ENST00000594073 261 ntBASIC2.53□□□□□ -2
VRK3Q8IV63 AC011603.4-201ENST00000611325 277 ntBASIC2.53□□□□□ -2
VRK3Q8IV63 MIR6852-201ENST00000621699 66 ntBASIC2.53□□□□□ -2
VRK3Q8IV63 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.53□□□□□ -2
VRK3Q8IV63 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.53□□□□□ -2
VRK3Q8IV63 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.53□□□□□ -2
VRK3Q8IV63 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.52□□□□□ -2.01
VRK3Q8IV63 RNU1-72P-201ENST00000362976 153 ntBASIC2.52□□□□□ -2.01
VRK3Q8IV63 RNU6-153P-201ENST00000364422 104 ntBASIC2.52□□□□□ -2.01
VRK3Q8IV63 RNU1-109P-201ENST00000383960 147 ntBASIC2.52□□□□□ -2.01
VRK3Q8IV63 MIR1294-201ENST00000408503 142 ntBASIC2.52□□□□□ -2.01
VRK3Q8IV63 RNA5SP184-201ENST00000411071 108 ntBASIC2.52□□□□□ -2.01
VRK3Q8IV63 RNU2-55P-201ENST00000411146 174 ntBASIC2.52□□□□□ -2.01
VRK3Q8IV63 AL135786.1-201ENST00000415892 214 ntBASIC2.52□□□□□ -2.01
VRK3Q8IV63 RNU7-14P-201ENST00000459331 62 ntBASIC2.52□□□□□ -2.01
VRK3Q8IV63 Y_RNA.712-201ENST00000517011 92 ntBASIC2.52□□□□□ -2.01
VRK3Q8IV63 AC109329.2-201ENST00000519658 482 ntBASIC2.52□□□□□ -2.01
VRK3Q8IV63 AC018630.3-201ENST00000542637 96 ntBASIC2.52□□□□□ -2.01
VRK3Q8IV63 MIR378D2-201ENST00000580636 98 ntBASIC2.52□□□□□ -2.01
VRK3Q8IV63 AL670379.2-201ENST00000604983 252 ntBASIC2.52□□□□□ -2.01
VRK3Q8IV63 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms