Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.76□□□□□ -1.97
DDX53Q86TM3 Y_RNA.644-201ENST00000459006 113 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 RNU6-1041P-201ENST00000516254 102 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 RNA5SP320-201ENST00000516263 124 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 RNY3P16-201ENST00000516338 101 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 Y_RNA.674-201ENST00000516362 113 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 RNU6-182P-201ENST00000516970 105 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 AC026271.5-201ENST00000577873 130 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 MIR4438-201ENST00000585271 93 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 AL365265.1-201ENST00000621045 234 ntBASIC2.76□□□□□ -1.97
DDX53Q86TM3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
DDX53Q86TM3 CENPCP1-201ENST00000533085 2578 ntBASIC2.75□□□□□ -1.97
DDX53Q86TM3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
DDX53Q86TM3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.75□□□□□ -1.97
DDX53Q86TM3 HSPE1P21-201ENST00000438283 308 ntBASIC2.75□□□□□ -1.97
DDX53Q86TM3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.75□□□□□ -1.97
DDX53Q86TM3 AL137100.2-201ENST00000555786 315 ntBASIC2.75□□□□□ -1.97
DDX53Q86TM3 AC004832.4-201ENST00000608952 331 ntBASIC2.75□□□□□ -1.97
DDX53Q86TM3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.75□□□□□ -1.97
DDX53Q86TM3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.75□□□□□ -1.97
DDX53Q86TM3 AC013791.1-201ENST00000616619 62 ntBASIC2.75□□□□□ -1.97
DDX53Q86TM3 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.75□□□□□ -1.97
DDX53Q86TM3 AC068647.2-201ENST00000637380 353 ntBASIC2.75□□□□□ -1.97
DDX53Q86TM3 AC245060.5-201ENST00000610778 3293 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
DDX53Q86TM3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
DDX53Q86TM3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
DDX53Q86TM3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
DDX53Q86TM3 Y_RNA.262-201ENST00000364641 102 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 RNU6-923P-201ENST00000364753 107 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 Y_RNA.308-201ENST00000365043 101 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 RNU6-417P-201ENST00000384712 107 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 MIR504-201ENST00000385065 83 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 SNORA3.2-201ENST00000408221 125 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 AC104332.1-201ENST00000440471 797 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 RPL39P40-201ENST00000445481 146 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 AC245102.2-201ENST00000448956 180 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 RNU1-131P-201ENST00000458943 161 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 RNU7-141P-201ENST00000459304 62 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 AP005660.1-201ENST00000522972 293 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 CBX3P4-201ENST00000538909 354 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 MIR3126-201ENST00000577443 74 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 MIR5692C2-201ENST00000577959 77 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 AC004792.1-201ENST00000614523 137 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
DDX53Q86TM3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
DDX53Q86TM3 ZNF658B-202ENST00000615961 3375 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 AC068700.1-201ENST00000565862 3754 ntBASIC2.74□□□□□ -1.97
DDX53Q86TM3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.73□□□□□ -1.97
DDX53Q86TM3 snoU2-30.2-201ENST00000362805 70 ntBASIC2.73□□□□□ -1.97
DDX53Q86TM3 RNU1-22P-201ENST00000363334 158 ntBASIC2.73□□□□□ -1.97
DDX53Q86TM3 RNU6-899P-201ENST00000363947 107 ntBASIC2.73□□□□□ -1.97
DDX53Q86TM3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.73□□□□□ -1.97
DDX53Q86TM3 MIR518C-201ENST00000384822 101 ntBASIC2.73□□□□□ -1.97
DDX53Q86TM3 PIGPP3-201ENST00000425307 415 ntBASIC2.73□□□□□ -1.97
DDX53Q86TM3 RNU6-1146P-201ENST00000516282 102 ntBASIC2.73□□□□□ -1.97
DDX53Q86TM3 SUMO2P18-201ENST00000518873 252 ntBASIC2.73□□□□□ -1.97
DDX53Q86TM3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.73□□□□□ -1.97
DDX53Q86TM3 Z83818.1-201ENST00000603584 150 ntBASIC2.73□□□□□ -1.97
DDX53Q86TM3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.73□□□□□ -1.97
DDX53Q86TM3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
DDX53Q86TM3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
DDX53Q86TM3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
DDX53Q86TM3 RNA5SP289-201ENST00000362332 137 ntBASIC2.72□□□□□ -1.97
DDX53Q86TM3 RNU6-47P-201ENST00000383866 107 ntBASIC2.72□□□□□ -1.97
DDX53Q86TM3 RNU6-136P-201ENST00000384663 107 ntBASIC2.72□□□□□ -1.97
DDX53Q86TM3 RNU6-493P-201ENST00000391321 108 ntBASIC2.72□□□□□ -1.97
DDX53Q86TM3 RNA5SP511-201ENST00000410487 115 ntBASIC2.72□□□□□ -1.97
DDX53Q86TM3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.72□□□□□ -1.97
DDX53Q86TM3 AL353689.1-201ENST00000438895 199 ntBASIC2.72□□□□□ -1.97
DDX53Q86TM3 HMGB3P3-201ENST00000510526 400 ntBASIC2.72□□□□□ -1.97
DDX53Q86TM3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.72□□□□□ -1.97
DDX53Q86TM3 AC097462.1-201ENST00000514125 324 ntBASIC2.72□□□□□ -1.97
DDX53Q86TM3 RNU7-172P-201ENST00000517125 64 ntBASIC2.72□□□□□ -1.97
DDX53Q86TM3 U6.73-201ENST00000619194 103 ntBASIC2.72□□□□□ -1.97
DDX53Q86TM3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
DDX53Q86TM3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
DDX53Q86TM3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
DDX53Q86TM3 RNU6-653P-201ENST00000363074 106 ntBASIC2.71□□□□□ -1.98
DDX53Q86TM3 U8.2-201ENST00000363156 134 ntBASIC2.71□□□□□ -1.98
DDX53Q86TM3 RNU6-1020P-201ENST00000363684 107 ntBASIC2.71□□□□□ -1.98
DDX53Q86TM3 RNA5SP493-201ENST00000364115 91 ntBASIC2.71□□□□□ -1.98
DDX53Q86TM3 Y_RNA.293-201ENST00000364908 93 ntBASIC2.71□□□□□ -1.98
DDX53Q86TM3 U8.7-201ENST00000364940 136 ntBASIC2.71□□□□□ -1.98
DDX53Q86TM3 RNU6-117P-201ENST00000365415 107 ntBASIC2.71□□□□□ -1.98
DDX53Q86TM3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.71□□□□□ -1.98
DDX53Q86TM3 RNU4-53P-201ENST00000410828 140 ntBASIC2.71□□□□□ -1.98
DDX53Q86TM3 AC010154.1-201ENST00000425857 269 ntBASIC2.71□□□□□ -1.98
DDX53Q86TM3 ATP5J2P3-201ENST00000451550 258 ntBASIC2.71□□□□□ -1.98
DDX53Q86TM3 snoU13.26-201ENST00000459452 105 ntBASIC2.71□□□□□ -1.98
DDX53Q86TM3 AC117454.1-201ENST00000491120 168 ntBASIC2.71□□□□□ -1.98
DDX53Q86TM3 AL031274.2-201ENST00000599419 203 ntBASIC2.71□□□□□ -1.98
DDX53Q86TM3 AC098479.1-201ENST00000609225 154 ntBASIC2.71□□□□□ -1.98
DDX53Q86TM3 MIR338-201ENST00000636369 67 ntBASIC2.71□□□□□ -1.98
DDX53Q86TM3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
DDX53Q86TM3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
DDX53Q86TM3 RNU6-23P-201ENST00000363283 107 ntBASIC2.7□□□□□ -1.98
DDX53Q86TM3 AL355497.1-201ENST00000406262 551 ntBASIC2.7□□□□□ -1.98
DDX53Q86TM3 RNU6-1186P-201ENST00000410429 97 ntBASIC2.7□□□□□ -1.98
DDX53Q86TM3 AC009310.1-201ENST00000414414 451 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms