| CRTC3 | Q6UUV7 | Y_RNA.622-201 | ENST00000411091 | 108 nt | BASIC | 2.96 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | RNU2-55P-201 | ENST00000411146 | 174 nt | BASIC | 2.96 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AL359195.1-201 | ENST00000416657 | 339 nt | TSL 3 BASIC | 2.96 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AL360175.1-201 | ENST00000426547 | 285 nt | TSL 5 BASIC | 2.96 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | SNORA4.4-201 | ENST00000515921 | 135 nt | BASIC | 2.96 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AL160236.1-201 | ENST00000556317 | 195 nt | BASIC | 2.96 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | MIR6844-201 | ENST00000637122 | 62 nt | BASIC | 2.96 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | THOC2-201 | ENST00000245838 | 5609 nt | APPRIS P1 TSL 5 BASIC | 2.96 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | MBNL3-205 | ENST00000370857 | 8760 nt | TSL 5 BASIC | 2.96 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | PRKACB-217 | ENST00000610457 | 4206 nt | TSL 2 BASIC | 2.95 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AKAP7-209 | ENST00000541650 | 2008 nt | TSL 5 BASIC | 2.95 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | MINDY3-202 | ENST00000378036 | 2452 nt | TSL 2 BASIC | 2.95 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | RNU6-743P-201 | ENST00000364151 | 106 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | RNU6-597P-201 | ENST00000365620 | 102 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | SNORA20-201 | ENST00000384662 | 132 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | MIR1289-1-201 | ENST00000408836 | 144 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | RPS4XP11-201 | ENST00000446897 | 772 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AC092991.1-201 | ENST00000477176 | 376 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AC103879.1-201 | ENST00000503093 | 255 nt | TSL 2 BASIC | 2.95 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AC108067.1-201 | ENST00000514304 | 215 nt | TSL 5 BASIC | 2.95 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | RNU6-991P-201 | ENST00000516168 | 107 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | RN7SKP43-201 | ENST00000516173 | 320 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | RNU6-971P-201 | ENST00000516920 | 106 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | RNU7-172P-201 | ENST00000517125 | 64 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | TUG1_4.1-201 | ENST00000619464 | 181 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | OSBPL1A-217 | ENST00000638614 | 84 nt | TSL 5 BASIC | 2.95 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | PRKG1-205 | ENST00000401604 | 5922 nt | TSL 5 BASIC | 2.95 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | GRAMD1C-202 | ENST00000440446 | 3475 nt | TSL 1 (best) BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | Y_RNA.218-201 | ENST00000364218 | 104 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | Y_RNA.587-201 | ENST00000391210 | 103 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | NDUFB4P4-201 | ENST00000404822 | 243 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | RNA5SP274-201 | ENST00000410484 | 108 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | Y_RNA.629-201 | ENST00000411368 | 105 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | KRTAP25-1-201 | ENST00000416044 | 370 nt | APPRIS P1 BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AC245102.2-201 | ENST00000448956 | 180 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | SNRPGP8-201 | ENST00000454064 | 226 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | S100A11P2-201 | ENST00000467589 | 312 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AC092666.1-201 | ENST00000492054 | 573 nt | TSL 4 BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | RNU6-197P-201 | ENST00000516680 | 100 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | MIR2681-201 | ENST00000581814 | 105 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AL445259.1-201 | ENST00000587106 | 2984 nt | TSL 5 BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AL929325.1-201 | ENST00000603096 | 117 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | U2.20-201 | ENST00000613956 | 192 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | DCLRE1A-202 | ENST00000369305 | 4241 nt | APPRIS P1 TSL 5 BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | ROCK2-203 | ENST00000401753 | 4017 nt | TSL 1 (best) BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | THNSL1-201 | ENST00000376356 | 3691 nt | APPRIS P1 TSL 1 (best) BASIC | 2.94 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | TFEC-202 | ENST00000320239 | 6605 nt | APPRIS P1 TSL 1 (best) BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | MIR340-201 | ENST00000362125 | 95 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | Y_RNA.127-201 | ENST00000363386 | 109 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | Y_RNA.203-201 | ENST00000364106 | 102 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | RNA5SP205-201 | ENST00000364653 | 136 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | SNORD116-14-201 | ENST00000383894 | 92 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | SNORD116-17-201 | ENST00000383929 | 92 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | RNU6-484P-201 | ENST00000384016 | 107 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | Y_RNA.432-201 | ENST00000384087 | 111 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | SNORD116-15-201 | ENST00000384445 | 92 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | SNORA44-201 | ENST00000384584 | 132 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | SNORD116-19-201 | ENST00000384729 | 92 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AC063976.3-201 | ENST00000426849 | 329 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AC008852.1-201 | ENST00000510198 | 451 nt | TSL 2 BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | SCGB1D5P-201 | ENST00000515134 | 247 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AC090138.1-201 | ENST00000524493 | 578 nt | TSL 4 BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | DISC1FP1-204 | ENST00000563681 | 466 nt | TSL 3 BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | MIR378D2-201 | ENST00000580636 | 98 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | MIR3616-201 | ENST00000584070 | 92 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | U6.73-201 | ENST00000619194 | 103 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AP001340.1-201 | ENST00000624405 | 217 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | ZMYM1-210 | ENST00000611874 | 4466 nt | APPRIS P1 TSL 2 BASIC | 2.93 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | HDX-206 | ENST00000506585 | 6158 nt | TSL 2 BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | MUM1L1-203 | ENST00000372552 | 3957 nt | APPRIS P1 TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | GMFB-208 | ENST00000554908 | 6721 nt | TSL 1 (best) BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | SNORD21-201 | ENST00000383953 | 95 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | Y_RNA.542-201 | ENST00000384641 | 111 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | TRDJ3-201 | ENST00000390476 | 59 nt | APPRIS P1 BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | RNU6-220P-201 | ENST00000390919 | 107 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | MIR1253-201 | ENST00000408273 | 105 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AC020743.3-201 | ENST00000440351 | 360 nt | TSL 3 BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | EEF1B2P7-201 | ENST00000451177 | 676 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AP004217.1-201 | ENST00000480579 | 346 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | RPS29P21-201 | ENST00000496272 | 170 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | SNORA31.26-201 | ENST00000517250 | 137 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AC007536.1-201 | ENST00000533382 | 349 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | MIR3117-201 | ENST00000584034 | 78 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AL031274.2-201 | ENST00000599419 | 203 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AL049861.1-201 | ENST00000603130 | 150 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AC120024.3-201 | ENST00000603167 | 156 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AL355297.2-201 | ENST00000604792 | 129 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | HNRNPDLP4-201 | ENST00000605144 | 301 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AC006386.2-201 | ENST00000624491 | 75 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AC012005.1-201 | ENST00000624575 | 75 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AL137790.1-201 | ENST00000634283 | 177 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | HERC4-201 | ENST00000277817 | 4371 nt | TSL 1 (best) BASIC | 2.92 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | SLC30A6-202 | ENST00000357055 | 4758 nt | TSL 2 BASIC | 2.91 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | ZNF676-201 | ENST00000397121 | 2944 nt | APPRIS P1 TSL 2 BASIC | 2.91 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | MIR561-201 | ENST00000385216 | 97 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | RNU6-460P-201 | ENST00000391158 | 108 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | EEF1A1P41-201 | ENST00000414667 | 207 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | AC003685.2-201 | ENST00000422795 | 395 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | RN7SL633P-201 | ENST00000488974 | 297 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CRTC3 | Q6UUV7 | SNORD77.4-201 | ENST00000516158 | 81 nt | BASIC | 2.91 | □□□□□ -1.94 | | |