Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AC022018.1-201ENST00000430685 241 ntBASIC2.89□□□□□ -1.95
E4F1Q66K89 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.89□□□□□ -1.95
E4F1Q66K89 HMGN2P34-201ENST00000437647 269 ntBASIC2.89□□□□□ -1.95
E4F1Q66K89 AL121914.1-201ENST00000450188 156 ntBASIC2.89□□□□□ -1.95
E4F1Q66K89 EEF1B2P7-201ENST00000451177 676 ntBASIC2.89□□□□□ -1.95
E4F1Q66K89 AC005840.1-201ENST00000498412 377 ntBASIC2.89□□□□□ -1.95
E4F1Q66K89 RN7SKP57-201ENST00000517248 293 ntBASIC2.89□□□□□ -1.95
E4F1Q66K89 AC109810.1-201ENST00000534066 224 ntBASIC2.89□□□□□ -1.95
E4F1Q66K89 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.89□□□□□ -1.95
E4F1Q66K89 AC127455.1-201ENST00000565496 145 ntBASIC2.89□□□□□ -1.95
E4F1Q66K89 AC007336.1-201ENST00000576365 3828 ntBASIC2.89□□□□□ -1.95
E4F1Q66K89 AC090616.3-201ENST00000582184 217 ntBASIC2.89□□□□□ -1.95
E4F1Q66K89 MIR3616-201ENST00000584070 92 ntBASIC2.89□□□□□ -1.95
E4F1Q66K89 MIR92B-201ENST00000607575 96 ntBASIC2.89□□□□□ -1.95
E4F1Q66K89 AC132825.6-201ENST00000638861 357 ntBASIC2.89□□□□□ -1.95
E4F1Q66K89 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
E4F1Q66K89 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.88□□□□□ -1.95
E4F1Q66K89 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
E4F1Q66K89 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
E4F1Q66K89 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.88□□□□□ -1.95
E4F1Q66K89 Y_RNA.580-201ENST00000391004 95 ntBASIC2.88□□□□□ -1.95
E4F1Q66K89 AL606845.1-201ENST00000404881 255 ntBASIC2.88□□□□□ -1.95
E4F1Q66K89 RPL36AP21-201ENST00000490372 323 ntBASIC2.88□□□□□ -1.95
E4F1Q66K89 AC015720.1-201ENST00000565251 277 ntBASIC2.88□□□□□ -1.95
E4F1Q66K89 MIR4431-201ENST00000579990 94 ntBASIC2.88□□□□□ -1.95
E4F1Q66K89 MIR5688-201ENST00000580619 83 ntBASIC2.88□□□□□ -1.95
E4F1Q66K89 MIR4325-201ENST00000583049 90 ntBASIC2.88□□□□□ -1.95
E4F1Q66K89 MIR4635-201ENST00000583759 79 ntBASIC2.88□□□□□ -1.95
E4F1Q66K89 AL137847.3-201ENST00000611521 109 ntBASIC2.88□□□□□ -1.95
E4F1Q66K89 AL391903.3-201ENST00000612158 163 ntBASIC2.88□□□□□ -1.95
E4F1Q66K89 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.88□□□□□ -1.95
E4F1Q66K89 AC245060.5-201ENST00000610778 3293 ntBASIC2.88□□□□□ -1.95
E4F1Q66K89 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
E4F1Q66K89 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
E4F1Q66K89 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
E4F1Q66K89 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
E4F1Q66K89 MIR208A-201ENST00000362287 71 ntBASIC2.87□□□□□ -1.95
E4F1Q66K89 RNU6-151P-201ENST00000364158 107 ntBASIC2.87□□□□□ -1.95
E4F1Q66K89 RNU6-704P-201ENST00000364162 103 ntBASIC2.87□□□□□ -1.95
E4F1Q66K89 RNU6-376P-201ENST00000384731 106 ntBASIC2.87□□□□□ -1.95
E4F1Q66K89 RNU6-239P-201ENST00000390990 99 ntBASIC2.87□□□□□ -1.95
E4F1Q66K89 RNU6-437P-201ENST00000459408 95 ntBASIC2.87□□□□□ -1.95
E4F1Q66K89 AC018868.1-201ENST00000491307 315 ntBASIC2.87□□□□□ -1.95
E4F1Q66K89 AC097462.1-201ENST00000514125 324 ntBASIC2.87□□□□□ -1.95
E4F1Q66K89 RNU6-856P-201ENST00000516959 98 ntBASIC2.87□□□□□ -1.95
E4F1Q66K89 RNU7-172P-201ENST00000517125 64 ntBASIC2.87□□□□□ -1.95
E4F1Q66K89 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.87□□□□□ -1.95
E4F1Q66K89 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.87□□□□□ -1.95
E4F1Q66K89 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
E4F1Q66K89 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.87□□□□□ -1.95
E4F1Q66K89 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.86□□□□□ -1.95
E4F1Q66K89 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
E4F1Q66K89 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
E4F1Q66K89 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.86□□□□□ -1.95
E4F1Q66K89 AC138915.1-201ENST00000565427 1685 ntBASIC2.86□□□□□ -1.95
E4F1Q66K89 RNU1-22P-201ENST00000363334 158 ntBASIC2.86□□□□□ -1.95
E4F1Q66K89 RNU6-117P-201ENST00000365415 107 ntBASIC2.86□□□□□ -1.95
E4F1Q66K89 SNORA25B-201ENST00000365507 128 ntBASIC2.86□□□□□ -1.95
E4F1Q66K89 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
E4F1Q66K89 AC006461.1-201ENST00000412637 326 ntBASIC2.86□□□□□ -1.95
E4F1Q66K89 AC060773.1-201ENST00000421698 310 ntBASIC2.86□□□□□ -1.95
E4F1Q66K89 AL606753.1-201ENST00000427435 87 ntBASIC2.86□□□□□ -1.95
E4F1Q66K89 AL162725.1-201ENST00000435405 301 ntBASIC2.86□□□□□ -1.95
E4F1Q66K89 AL445687.1-201ENST00000439946 251 ntBASIC2.86□□□□□ -1.95
E4F1Q66K89 RPS29P21-201ENST00000496272 170 ntBASIC2.86□□□□□ -1.95
E4F1Q66K89 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.86□□□□□ -1.95
E4F1Q66K89 AC107027.2-201ENST00000512197 115 ntBASIC2.86□□□□□ -1.95
E4F1Q66K89 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.86□□□□□ -1.95
E4F1Q66K89 AP001485.1-201ENST00000604799 199 ntBASIC2.86□□□□□ -1.95
E4F1Q66K89 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.86□□□□□ -1.95
E4F1Q66K89 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.86□□□□□ -1.95
E4F1Q66K89 MIR340-201ENST00000362125 95 ntBASIC2.85□□□□□ -1.95
E4F1Q66K89 RNU4-41P-201ENST00000364426 143 ntBASIC2.85□□□□□ -1.95
E4F1Q66K89 RNU6-417P-201ENST00000384712 107 ntBASIC2.85□□□□□ -1.95
E4F1Q66K89 MIR15B-201ENST00000385045 98 ntBASIC2.85□□□□□ -1.95
E4F1Q66K89 RNA5SP21-201ENST00000410917 96 ntBASIC2.85□□□□□ -1.95
E4F1Q66K89 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.85□□□□□ -1.95
E4F1Q66K89 AP001486.1-201ENST00000463339 476 ntBASIC2.85□□□□□ -1.95
E4F1Q66K89 SNORD116-25-201ENST00000516517 92 ntBASIC2.85□□□□□ -1.95
E4F1Q66K89 RNA5SP402-201ENST00000517148 110 ntBASIC2.85□□□□□ -1.95
E4F1Q66K89 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.85□□□□□ -1.95
E4F1Q66K89 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.85□□□□□ -1.95
E4F1Q66K89 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
E4F1Q66K89 Y_RNA.343-201ENST00000365354 112 ntBASIC2.84□□□□□ -1.95
E4F1Q66K89 RNU6-728P-201ENST00000365375 104 ntBASIC2.84□□□□□ -1.95
E4F1Q66K89 Y_RNA.400-201ENST00000383963 111 ntBASIC2.84□□□□□ -1.95
E4F1Q66K89 Y_RNA.488-201ENST00000384403 102 ntBASIC2.84□□□□□ -1.95
E4F1Q66K89 MIR627-201ENST00000384979 97 ntBASIC2.84□□□□□ -1.95
E4F1Q66K89 RNU6-1228P-201ENST00000391014 107 ntBASIC2.84□□□□□ -1.95
E4F1Q66K89 RNU6-1186P-201ENST00000410429 97 ntBASIC2.84□□□□□ -1.95
E4F1Q66K89 S100A11P2-201ENST00000467589 312 ntBASIC2.84□□□□□ -1.95
E4F1Q66K89 RNU6-561P-201ENST00000516222 102 ntBASIC2.84□□□□□ -1.95
E4F1Q66K89 U2.20-201ENST00000613956 192 ntBASIC2.84□□□□□ -1.95
E4F1Q66K89 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.96
E4F1Q66K89 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
E4F1Q66K89 ZNF271P-202ENST00000465539 1970 ntBASIC2.83□□□□□ -1.96
E4F1Q66K89 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
E4F1Q66K89 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
E4F1Q66K89 RNU6-818P-201ENST00000364837 108 ntBASIC2.83□□□□□ -1.96
E4F1Q66K89 MIR1278-201ENST00000408753 81 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 207.5 ms