Protein–RNA interactions for Protein: Q08ER8

ZNF543, Zinc finger protein 543, humanhuman

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543Q08ER8 RNU6-436P-201ENST00000516171 114 ntBASIC2.24□□□□□ -2.05
ZNF543Q08ER8 RNU6-635P-201ENST00000516651 102 ntBASIC2.24□□□□□ -2.05
ZNF543Q08ER8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.24□□□□□ -2.05
ZNF543Q08ER8 AC023157.2-201ENST00000540596 141 ntBASIC2.24□□□□□ -2.05
ZNF543Q08ER8 AC002984.1-201ENST00000591692 448 ntBASIC2.24□□□□□ -2.05
ZNF543Q08ER8 MIR6895-201ENST00000613497 78 ntBASIC2.24□□□□□ -2.05
ZNF543Q08ER8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.24□□□□□ -2.05
ZNF543Q08ER8 U6.104-201ENST00000637979 90 ntBASIC2.24□□□□□ -2.05
ZNF543Q08ER8 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ZNF543Q08ER8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.23□□□□□ -2.05
ZNF543Q08ER8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.23□□□□□ -2.05
ZNF543Q08ER8 Y_RNA.176-201ENST00000363815 109 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 SNORA16B-201ENST00000364674 135 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 SNORA8-201ENST00000384574 139 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 RNA5SP212-201ENST00000391223 107 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 RNA5SP467-201ENST00000391274 118 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 RNU6-710P-201ENST00000410424 105 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 RNU6-1186P-201ENST00000410429 97 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.23□□□□□ -2.05
ZNF543Q08ER8 AC096920.1-201ENST00000423991 241 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 POLR2KP2-201ENST00000438155 177 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 RNU6-717P-201ENST00000459076 104 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 RPS26P55-201ENST00000471178 356 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 RNA5SP182-201ENST00000516064 82 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 RNU7-99P-201ENST00000516271 62 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 RNA5SP82-201ENST00000516707 92 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.23□□□□□ -2.05
ZNF543Q08ER8 AP003733.2-201ENST00000529409 171 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.23□□□□□ -2.05
ZNF543Q08ER8 AL117187.1-201ENST00000555482 181 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 RPL21P9-201ENST00000556149 474 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 MYL12BP1-201ENST00000569826 507 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 MIR4287-201ENST00000579398 78 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.23□□□□□ -2.05
ZNF543Q08ER8 MIR6845-201ENST00000613182 61 ntBASIC2.23□□□□□ -2.05
ZNF543Q08ER8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
ZNF543Q08ER8 Y_RNA.581-201ENST00000391017 97 ntBASIC2.22□□□□□ -2.05
ZNF543Q08ER8 EBAG9P1-201ENST00000418955 543 ntBASIC2.22□□□□□ -2.05
ZNF543Q08ER8 AL591806.2-201ENST00000433122 173 ntBASIC2.22□□□□□ -2.05
ZNF543Q08ER8 DYNLT3P2-201ENST00000442517 295 ntBASIC2.22□□□□□ -2.05
ZNF543Q08ER8 MTATP8P1-201ENST00000467115 207 ntBASIC2.22□□□□□ -2.05
ZNF543Q08ER8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.22□□□□□ -2.05
ZNF543Q08ER8 RNU6-1278P-201ENST00000516130 107 ntBASIC2.22□□□□□ -2.05
ZNF543Q08ER8 RNU6-496P-201ENST00000516145 99 ntBASIC2.22□□□□□ -2.05
ZNF543Q08ER8 RNU6-295P-201ENST00000516901 104 ntBASIC2.22□□□□□ -2.05
ZNF543Q08ER8 RNU7-172P-201ENST00000517125 64 ntBASIC2.22□□□□□ -2.05
ZNF543Q08ER8 AC008269.2-201ENST00000561915 1105 ntBASIC2.22□□□□□ -2.05
ZNF543Q08ER8 SUB1P4-201ENST00000566062 339 ntBASIC2.22□□□□□ -2.05
ZNF543Q08ER8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.22□□□□□ -2.05
ZNF543Q08ER8 AC010615.1-201ENST00000594254 1764 ntBASIC2.22□□□□□ -2.05
ZNF543Q08ER8 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.22□□□□□ -2.05
ZNF543Q08ER8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
ZNF543Q08ER8 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
ZNF543Q08ER8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
ZNF543Q08ER8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
ZNF543Q08ER8 RNA5SP276-201ENST00000362580 94 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 Y_RNA.64-201ENST00000362845 102 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 RNU1-22P-201ENST00000363334 158 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 Y_RNA.149-201ENST00000363558 117 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 Y_RNA.329-201ENST00000365209 107 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 Y_RNA.383-201ENST00000383855 97 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 RNU6-505P-201ENST00000384427 107 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 RNU6-1248P-201ENST00000391096 64 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 MIR548F4-201ENST00000408515 105 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 RNU6-121P-201ENST00000410525 99 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 snoU13.23-201ENST00000458863 104 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 RNA5SP57-201ENST00000459463 123 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 RPL23AP42-201ENST00000471152 471 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 AC097462.1-201ENST00000514125 324 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 RNU1-40P-201ENST00000516816 164 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 RNU1-97P-201ENST00000516872 164 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.21□□□□□ -2.06
ZNF543Q08ER8 AC084364.2-201ENST00000546924 395 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 AC005034.5-201ENST00000604219 466 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 AC037487.3-201ENST00000606668 112 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 AC127459.3-201ENST00000624328 466 ntBASIC2.21□□□□□ -2.06
ZNF543Q08ER8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.21□□□□□ -2.06
ZNF543Q08ER8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ZNF543Q08ER8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ZNF543Q08ER8 Y_RNA.105-201ENST00000363182 111 ntBASIC2.2□□□□□ -2.06
ZNF543Q08ER8 RNU6-238P-201ENST00000363313 106 ntBASIC2.2□□□□□ -2.06
ZNF543Q08ER8 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
ZNF543Q08ER8 Y_RNA.574-201ENST00000384766 95 ntBASIC2.2□□□□□ -2.06
ZNF543Q08ER8 MIR583-201ENST00000384846 75 ntBASIC2.2□□□□□ -2.06
ZNF543Q08ER8 MIR520A-201ENST00000384862 85 ntBASIC2.2□□□□□ -2.06
ZNF543Q08ER8 RNU2-61P-201ENST00000411069 191 ntBASIC2.2□□□□□ -2.06
ZNF543Q08ER8 AC003989.2-201ENST00000440224 169 ntBASIC2.2□□□□□ -2.06
ZNF543Q08ER8 HSPE1P13-201ENST00000451143 297 ntBASIC2.2□□□□□ -2.06
ZNF543Q08ER8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF543Q08ER8 MTND4LP30-201ENST00000454092 297 ntBASIC2.2□□□□□ -2.06
ZNF543Q08ER8 RNU7-94P-201ENST00000459576 63 ntBASIC2.2□□□□□ -2.06
ZNF543Q08ER8 AC010409.1-201ENST00000487382 476 ntBASIC2.2□□□□□ -2.06
ZNF543Q08ER8 AC090255.1-201ENST00000495779 349 ntBASIC2.2□□□□□ -2.06
ZNF543Q08ER8 RNU6-966P-201ENST00000516479 104 ntBASIC2.2□□□□□ -2.06
ZNF543Q08ER8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
ZNF543Q08ER8 SNORD81.1-201ENST00000363064 77 ntBASIC2.19□□□□□ -2.06
ZNF543Q08ER8 Y_RNA.124-201ENST00000363339 93 ntBASIC2.19□□□□□ -2.06
ZNF543Q08ER8 Y_RNA.222-201ENST00000364264 102 ntBASIC2.19□□□□□ -2.06
ZNF543Q08ER8 MIR17-201ENST00000385012 84 ntBASIC2.19□□□□□ -2.06
ZNF543Q08ER8 SNORA53-201ENST00000391141 249 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms