Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC026436.1-201ENST00000510537 270 ntBASIC2.16□□□□□ -2.06
LTBQ06643 RNU6-255P-201ENST00000516957 105 ntBASIC2.16□□□□□ -2.06
LTBQ06643 MIR1273D-201ENST00000577266 86 ntBASIC2.16□□□□□ -2.06
LTBQ06643 RPL17P51-201ENST00000605218 238 ntBASIC2.16□□□□□ -2.06
LTBQ06643 AC067747.1-201ENST00000608026 250 ntBASIC2.16□□□□□ -2.06
LTBQ06643 AL365265.1-201ENST00000621045 234 ntBASIC2.16□□□□□ -2.06
LTBQ06643 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.16□□□□□ -2.06
LTBQ06643 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
LTBQ06643 AC068700.1-201ENST00000565862 3754 ntBASIC2.15□□□□□ -2.07
LTBQ06643 RNU6-653P-201ENST00000363074 106 ntBASIC2.15□□□□□ -2.07
LTBQ06643 Y_RNA.304-201ENST00000365011 112 ntBASIC2.15□□□□□ -2.07
LTBQ06643 MIR586-201ENST00000385035 97 ntBASIC2.15□□□□□ -2.07
LTBQ06643 RNU6-763P-201ENST00000390865 106 ntBASIC2.15□□□□□ -2.07
LTBQ06643 MIR1294-201ENST00000408503 142 ntBASIC2.15□□□□□ -2.07
LTBQ06643 MIR1185-2-201ENST00000408687 86 ntBASIC2.15□□□□□ -2.07
LTBQ06643 BTF3P11-201ENST00000426582 477 ntBASIC2.15□□□□□ -2.07
LTBQ06643 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.15□□□□□ -2.07
LTBQ06643 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.15□□□□□ -2.07
LTBQ06643 RPL23AP42-201ENST00000471152 471 ntBASIC2.15□□□□□ -2.07
LTBQ06643 RN7SL636P-201ENST00000497504 294 ntBASIC2.15□□□□□ -2.07
LTBQ06643 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
LTBQ06643 HMGB3P3-201ENST00000510526 400 ntBASIC2.15□□□□□ -2.07
LTBQ06643 RNA5SP445-201ENST00000515889 115 ntBASIC2.15□□□□□ -2.07
LTBQ06643 RNU6-1053P-201ENST00000515930 101 ntBASIC2.15□□□□□ -2.07
LTBQ06643 SCARNA3-201ENST00000517097 143 ntBASIC2.15□□□□□ -2.07
LTBQ06643 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
LTBQ06643 MIR3199-1-201ENST00000582434 88 ntBASIC2.15□□□□□ -2.07
LTBQ06643 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.15□□□□□ -2.07
LTBQ06643 RNU6-774P-201ENST00000363238 107 ntBASIC2.14□□□□□ -2.07
LTBQ06643 Y_RNA.262-201ENST00000364641 102 ntBASIC2.14□□□□□ -2.07
LTBQ06643 RNU6-234P-201ENST00000365229 104 ntBASIC2.14□□□□□ -2.07
LTBQ06643 Y_RNA.361-201ENST00000365515 120 ntBASIC2.14□□□□□ -2.07
LTBQ06643 SNORA26.5-201ENST00000391215 123 ntBASIC2.14□□□□□ -2.07
LTBQ06643 MIR548M-201ENST00000408260 86 ntBASIC2.14□□□□□ -2.07
LTBQ06643 U6atac.2-201ENST00000408644 118 ntBASIC2.14□□□□□ -2.07
LTBQ06643 AC104389.3-201ENST00000445629 235 ntBASIC2.14□□□□□ -2.07
LTBQ06643 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.14□□□□□ -2.07
LTBQ06643 SNORA31.11-201ENST00000516528 139 ntBASIC2.14□□□□□ -2.07
LTBQ06643 RNU6-586P-201ENST00000517265 104 ntBASIC2.14□□□□□ -2.07
LTBQ06643 AC072026.1-201ENST00000605023 201 ntBASIC2.14□□□□□ -2.07
LTBQ06643 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.14□□□□□ -2.07
LTBQ06643 MIR1291-201ENST00000627649 87 ntBASIC2.14□□□□□ -2.07
LTBQ06643 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.14□□□□□ -2.07
LTBQ06643 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.14□□□□□ -2.07
LTBQ06643 RNU6-1048P-201ENST00000364054 107 ntBASIC2.13□□□□□ -2.07
LTBQ06643 Y_RNA.233-201ENST00000364407 101 ntBASIC2.13□□□□□ -2.07
LTBQ06643 RNU1-91P-201ENST00000364746 163 ntBASIC2.13□□□□□ -2.07
LTBQ06643 Y_RNA.464-201ENST00000384282 110 ntBASIC2.13□□□□□ -2.07
LTBQ06643 SNORD14D-201ENST00000384390 87 ntBASIC2.13□□□□□ -2.07
LTBQ06643 RNU6-220P-201ENST00000390919 107 ntBASIC2.13□□□□□ -2.07
LTBQ06643 RNU6-1248P-201ENST00000391096 64 ntBASIC2.13□□□□□ -2.07
LTBQ06643 MIR1283-1-201ENST00000408494 87 ntBASIC2.13□□□□□ -2.07
LTBQ06643 RNU4-61P-201ENST00000411243 107 ntBASIC2.13□□□□□ -2.07
LTBQ06643 HMGN2P35-201ENST00000412164 270 ntBASIC2.13□□□□□ -2.07
LTBQ06643 AC245517.4-201ENST00000448601 281 ntBASIC2.13□□□□□ -2.07
LTBQ06643 RNU7-57P-201ENST00000459540 60 ntBASIC2.13□□□□□ -2.07
LTBQ06643 AC023141.11-201ENST00000508864 202 ntBASIC2.13□□□□□ -2.07
LTBQ06643 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.13□□□□□ -2.07
LTBQ06643 RNU6-965P-201ENST00000516721 96 ntBASIC2.13□□□□□ -2.07
LTBQ06643 AL137100.2-201ENST00000555786 315 ntBASIC2.13□□□□□ -2.07
LTBQ06643 MIR4781-201ENST00000585250 76 ntBASIC2.13□□□□□ -2.07
LTBQ06643 AP000942.3-201ENST00000603702 160 ntBASIC2.13□□□□□ -2.07
LTBQ06643 AC103810.6-201ENST00000606708 136 ntBASIC2.13□□□□□ -2.07
LTBQ06643 MIR1248-201ENST00000629190 106 ntBASIC2.13□□□□□ -2.07
LTBQ06643 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
LTBQ06643 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.13□□□□□ -2.07
LTBQ06643 AC134026.1-201ENST00000623249 2239 ntBASIC2.13□□□□□ -2.07
LTBQ06643 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
LTBQ06643 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LTBQ06643 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
LTBQ06643 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LTBQ06643 Y_RNA.172-201ENST00000363765 102 ntBASIC2.12□□□□□ -2.07
LTBQ06643 AL355796.1-201ENST00000406706 323 ntBASIC2.12□□□□□ -2.07
LTBQ06643 AC016717.1-201ENST00000448918 286 ntBASIC2.12□□□□□ -2.07
LTBQ06643 RNU6-1219P-201ENST00000516143 112 ntBASIC2.12□□□□□ -2.07
LTBQ06643 AC136628.3-201ENST00000521868 290 ntBASIC2.12□□□□□ -2.07
LTBQ06643 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.12□□□□□ -2.07
LTBQ06643 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.12□□□□□ -2.07
LTBQ06643 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.12□□□□□ -2.07
LTBQ06643 PRELID2P1-201ENST00000552837 301 ntBASIC2.12□□□□□ -2.07
LTBQ06643 AC009127.3-201ENST00000570531 403 ntBASIC2.12□□□□□ -2.07
LTBQ06643 AC105245.1-201ENST00000581934 244 ntBASIC2.12□□□□□ -2.07
LTBQ06643 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.12□□□□□ -2.07
LTBQ06643 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LTBQ06643 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LTBQ06643 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.12□□□□□ -2.07
LTBQ06643 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.11□□□□□ -2.07
LTBQ06643 Y_RNA.355-201ENST00000365462 98 ntBASIC2.11□□□□□ -2.07
LTBQ06643 RNU6-1072P-201ENST00000384703 107 ntBASIC2.11□□□□□ -2.07
LTBQ06643 RNU6-443P-201ENST00000384780 107 ntBASIC2.11□□□□□ -2.07
LTBQ06643 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
LTBQ06643 MIR300-201ENST00000401138 83 ntBASIC2.11□□□□□ -2.07
LTBQ06643 AC018634.1-201ENST00000437554 401 ntBASIC2.11□□□□□ -2.07
LTBQ06643 AP005660.1-201ENST00000522972 293 ntBASIC2.11□□□□□ -2.07
LTBQ06643 AC021269.2-201ENST00000532318 330 ntBASIC2.11□□□□□ -2.07
LTBQ06643 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.11□□□□□ -2.07
LTBQ06643 MRPS18CP4-201ENST00000535821 231 ntBASIC2.11□□□□□ -2.07
LTBQ06643 AC018630.3-201ENST00000542637 96 ntBASIC2.11□□□□□ -2.07
LTBQ06643 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.11□□□□□ -2.07
LTBQ06643 MIR5692C2-201ENST00000577959 77 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms