Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 RNU1-138P-201ENST00000384093 164 ntBASIC2.27□□□□□ -2.05
TTC3P53804 Y_RNA.464-201ENST00000384282 110 ntBASIC2.27□□□□□ -2.05
TTC3P53804 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.27□□□□□ -2.05
TTC3P53804 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.27□□□□□ -2.05
TTC3P53804 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.27□□□□□ -2.05
TTC3P53804 RNU6-548P-201ENST00000517083 115 ntBASIC2.27□□□□□ -2.05
TTC3P53804 RNU6-789P-201ENST00000517105 102 ntBASIC2.27□□□□□ -2.05
TTC3P53804 AC024405.2-202ENST00000532731 184 ntBASIC2.27□□□□□ -2.05
TTC3P53804 MIR4308-201ENST00000580634 81 ntBASIC2.27□□□□□ -2.05
TTC3P53804 AC090616.3-201ENST00000582184 217 ntBASIC2.27□□□□□ -2.05
TTC3P53804 AC091564.4-201ENST00000533934 2194 ntBASIC2.27□□□□□ -2.05
TTC3P53804 Y_RNA.310-201ENST00000365063 113 ntBASIC2.26□□□□□ -2.05
TTC3P53804 RNU6-438P-201ENST00000365561 103 ntBASIC2.26□□□□□ -2.05
TTC3P53804 SNORA80E-201ENST00000384744 137 ntBASIC2.26□□□□□ -2.05
TTC3P53804 AL135790.2-201ENST00000437701 267 ntBASIC2.26□□□□□ -2.05
TTC3P53804 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.26□□□□□ -2.05
TTC3P53804 AC090515.1-201ENST00000465295 476 ntBASIC2.26□□□□□ -2.05
TTC3P53804 RNA5SP112-201ENST00000515937 99 ntBASIC2.26□□□□□ -2.05
TTC3P53804 AC100767.1-201ENST00000528178 123 ntBASIC2.26□□□□□ -2.05
TTC3P53804 AC079598.5-201ENST00000547460 117 ntBASIC2.26□□□□□ -2.05
TTC3P53804 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.26□□□□□ -2.05
TTC3P53804 MIR5002-201ENST00000584713 97 ntBASIC2.26□□□□□ -2.05
TTC3P53804 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.26□□□□□ -2.05
TTC3P53804 Y_RNA.75-201ENST00000362927 97 ntBASIC2.25□□□□□ -2.05
TTC3P53804 RNU6-704P-201ENST00000364162 103 ntBASIC2.25□□□□□ -2.05
TTC3P53804 RNU6-234P-201ENST00000365229 104 ntBASIC2.25□□□□□ -2.05
TTC3P53804 Y_RNA.398-201ENST00000383952 99 ntBASIC2.25□□□□□ -2.05
TTC3P53804 MIR186-201ENST00000384988 86 ntBASIC2.25□□□□□ -2.05
TTC3P53804 RNA5SP504-201ENST00000410676 117 ntBASIC2.25□□□□□ -2.05
TTC3P53804 EIF4EP4-201ENST00000424916 578 ntBASIC2.25□□□□□ -2.05
TTC3P53804 RPL23AP7-203ENST00000449021 469 ntBASIC2.25□□□□□ -2.05
TTC3P53804 RPS29P12-201ENST00000460178 152 ntBASIC2.25□□□□□ -2.05
TTC3P53804 MIR449C-201ENST00000516047 92 ntBASIC2.25□□□□□ -2.05
TTC3P53804 RPL17P51-201ENST00000605218 238 ntBASIC2.25□□□□□ -2.05
TTC3P53804 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
TTC3P53804 Y_RNA.23-201ENST00000362496 106 ntBASIC2.25□□□□□ -2.05
TTC3P53804 Y_RNA.400-201ENST00000383963 111 ntBASIC2.25□□□□□ -2.05
TTC3P53804 Y_RNA.412-201ENST00000384001 104 ntBASIC2.25□□□□□ -2.05
TTC3P53804 SNORA72.4-201ENST00000384174 132 ntBASIC2.25□□□□□ -2.05
TTC3P53804 MIR586-201ENST00000385035 97 ntBASIC2.25□□□□□ -2.05
TTC3P53804 RNU6-763P-201ENST00000390865 106 ntBASIC2.25□□□□□ -2.05
TTC3P53804 MIR1185-2-201ENST00000408687 86 ntBASIC2.25□□□□□ -2.05
TTC3P53804 RNU6-1328P-201ENST00000410938 106 ntBASIC2.25□□□□□ -2.05
TTC3P53804 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.25□□□□□ -2.05
TTC3P53804 RNU6-255P-201ENST00000516957 105 ntBASIC2.25□□□□□ -2.05
TTC3P53804 AC136628.3-201ENST00000521868 290 ntBASIC2.25□□□□□ -2.05
TTC3P53804 AL670379.2-201ENST00000604983 252 ntBASIC2.25□□□□□ -2.05
TTC3P53804 UCA1.1-201ENST00000620952 75 ntBASIC2.25□□□□□ -2.05
TTC3P53804 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.25□□□□□ -2.05
TTC3P53804 U6.115-201ENST00000636045 103 ntBASIC2.25□□□□□ -2.05
TTC3P53804 Y_RNA.233-201ENST00000364407 101 ntBASIC2.24□□□□□ -2.05
TTC3P53804 RNU6-1180P-201ENST00000364935 107 ntBASIC2.24□□□□□ -2.05
TTC3P53804 Y_RNA.343-201ENST00000365354 112 ntBASIC2.24□□□□□ -2.05
TTC3P53804 Y_RNA.571-201ENST00000384753 98 ntBASIC2.24□□□□□ -2.05
TTC3P53804 MIR95-201ENST00000385072 81 ntBASIC2.24□□□□□ -2.05
TTC3P53804 RNA5SP492-201ENST00000411330 114 ntBASIC2.24□□□□□ -2.05
TTC3P53804 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.24□□□□□ -2.05
TTC3P53804 AL606753.1-201ENST00000427435 87 ntBASIC2.24□□□□□ -2.05
TTC3P53804 RNU7-141P-201ENST00000459304 62 ntBASIC2.24□□□□□ -2.05
TTC3P53804 Y_RNA.637-201ENST00000459424 114 ntBASIC2.24□□□□□ -2.05
TTC3P53804 AC114982.1-201ENST00000469402 321 ntBASIC2.24□□□□□ -2.05
TTC3P53804 RAC1P5-201ENST00000512182 576 ntBASIC2.24□□□□□ -2.05
TTC3P53804 RNU7-200P-201ENST00000516105 62 ntBASIC2.24□□□□□ -2.05
TTC3P53804 RNU6-295P-201ENST00000516901 104 ntBASIC2.24□□□□□ -2.05
TTC3P53804 MIR4431-201ENST00000579990 94 ntBASIC2.24□□□□□ -2.05
TTC3P53804 AP001485.1-201ENST00000604799 199 ntBASIC2.24□□□□□ -2.05
TTC3P53804 AC012640.5-201ENST00000623897 319 ntBASIC2.24□□□□□ -2.05
TTC3P53804 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
TTC3P53804 AC138915.1-201ENST00000565427 1685 ntBASIC2.24□□□□□ -2.05
TTC3P53804 Y_RNA.341-201ENST00000365341 102 ntBASIC2.24□□□□□ -2.05
TTC3P53804 CD24P4-201ENST00000382840 243 ntBASIC2.24□□□□□ -2.05
TTC3P53804 RNU6-211P-201ENST00000384047 107 ntBASIC2.24□□□□□ -2.05
TTC3P53804 SNORD14D-201ENST00000384390 87 ntBASIC2.24□□□□□ -2.05
TTC3P53804 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.24□□□□□ -2.05
TTC3P53804 SNORA26.9-201ENST00000391322 122 ntBASIC2.24□□□□□ -2.05
TTC3P53804 MIR1278-201ENST00000408753 81 ntBASIC2.24□□□□□ -2.05
TTC3P53804 RNU6-394P-201ENST00000410735 107 ntBASIC2.24□□□□□ -2.05
TTC3P53804 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
TTC3P53804 AC004386.2-201ENST00000441858 148 ntBASIC2.24□□□□□ -2.05
TTC3P53804 SCARNA17.1-201ENST00000516211 143 ntBASIC2.24□□□□□ -2.05
TTC3P53804 SCARNA17.2-201ENST00000516334 143 ntBASIC2.24□□□□□ -2.05
TTC3P53804 SCARNA11.3-201ENST00000517276 130 ntBASIC2.24□□□□□ -2.05
TTC3P53804 MTND5P41-201ENST00000517498 206 ntBASIC2.24□□□□□ -2.05
TTC3P53804 RPL30P11-203ENST00000598995 310 ntBASIC2.24□□□□□ -2.05
TTC3P53804 AC004832.4-201ENST00000608952 331 ntBASIC2.24□□□□□ -2.05
TTC3P53804 SCARNA17.4-201ENST00000614296 143 ntBASIC2.24□□□□□ -2.05
TTC3P53804 AL353997.5-201ENST00000618886 171 ntBASIC2.24□□□□□ -2.05
TTC3P53804 MIR6132-201ENST00000622083 109 ntBASIC2.24□□□□□ -2.05
TTC3P53804 AC002064.3-201ENST00000623448 346 ntBASIC2.24□□□□□ -2.05
TTC3P53804 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
TTC3P53804 AC132825.6-201ENST00000638861 357 ntBASIC2.24□□□□□ -2.05
TTC3P53804 Y_RNA.240-201ENST00000364469 95 ntBASIC2.23□□□□□ -2.05
TTC3P53804 Y_RNA.272-201ENST00000364696 102 ntBASIC2.23□□□□□ -2.05
TTC3P53804 RNU6-728P-201ENST00000365375 104 ntBASIC2.23□□□□□ -2.05
TTC3P53804 RNU6-514P-201ENST00000384208 107 ntBASIC2.23□□□□□ -2.05
TTC3P53804 SNORA8.3-201ENST00000384679 139 ntBASIC2.23□□□□□ -2.05
TTC3P53804 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
TTC3P53804 Z82209.1-201ENST00000422141 2135 ntBASIC2.23□□□□□ -2.05
TTC3P53804 RPL39P40-201ENST00000445481 146 ntBASIC2.23□□□□□ -2.05
TTC3P53804 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms