Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RNU1-42P-201ENST00000364033 160 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 RNU6-1310P-201ENST00000384153 107 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 RNY3P14-201ENST00000384309 102 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 RNA5SP109-201ENST00000391010 116 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 AC005002.2-201ENST00000438228 269 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 JTBP1-201ENST00000441314 247 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 HSPE1P24-201ENST00000450782 238 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 RPS29P23-201ENST00000458635 123 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 AC005908.1-201ENST00000468701 347 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.61□□□□□ -2.15
LIMK1P53667 RNU6-408P-201ENST00000515910 100 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 RNU6-699P-201ENST00000517081 110 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.61□□□□□ -2.15
LIMK1P53667 AL161670.1-201ENST00000554348 137 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 MIR4421-201ENST00000578133 69 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 U6.73-201ENST00000619194 103 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 MIR8063-201ENST00000621930 81 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 MIR3674-201ENST00000636576 68 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
LIMK1P53667 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
LIMK1P53667 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
LIMK1P53667 RNU6-407P-201ENST00000365280 104 ntBASIC1.6□□□□□ -2.15
LIMK1P53667 SNORA4.2-201ENST00000365313 147 ntBASIC1.6□□□□□ -2.15
LIMK1P53667 Y_RNA.428-201ENST00000384078 102 ntBASIC1.6□□□□□ -2.15
LIMK1P53667 SNORD116-29-201ENST00000384516 83 ntBASIC1.6□□□□□ -2.15
LIMK1P53667 RNU6-950P-201ENST00000384651 107 ntBASIC1.6□□□□□ -2.15
LIMK1P53667 SNORA67.6-201ENST00000391093 99 ntBASIC1.6□□□□□ -2.15
LIMK1P53667 MRPS18CP6-201ENST00000423587 223 ntBASIC1.6□□□□□ -2.15
LIMK1P53667 RPS26P45-201ENST00000471748 340 ntBASIC1.6□□□□□ -2.15
LIMK1P53667 RPL26P26-201ENST00000480251 434 ntBASIC1.6□□□□□ -2.15
LIMK1P53667 FGF7P4-201ENST00000509595 295 ntBASIC1.6□□□□□ -2.15
LIMK1P53667 RNU7-99P-201ENST00000516271 62 ntBASIC1.6□□□□□ -2.15
LIMK1P53667 MIR3684-201ENST00000579779 74 ntBASIC1.6□□□□□ -2.15
LIMK1P53667 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
LIMK1P53667 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
LIMK1P53667 ZNF209P-201ENST00000593450 2304 ntBASIC1.6□□□□□ -2.15
LIMK1P53667 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 Y_RNA.58-201ENST00000362807 102 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 Y_RNA.154-201ENST00000363624 102 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 Y_RNA.187-201ENST00000363918 113 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 RNY3P1-201ENST00000365085 102 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 SNORD114-22-201ENST00000365423 72 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 RNY3-201ENST00000365484 102 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 RNU6-1040P-201ENST00000383974 107 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 MIR517C-201ENST00000385103 95 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
LIMK1P53667 RN7SKP51-201ENST00000410781 304 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 RAB28P5-201ENST00000427490 651 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 AC096644.2-201ENST00000429278 159 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.59□□□□□ -2.15
LIMK1P53667 Y_RNA.661-201ENST00000516003 99 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 Y_RNA.675-201ENST00000516389 149 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.59□□□□□ -2.15
LIMK1P53667 AC011604.1-201ENST00000545978 196 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 RPL21P9-201ENST00000556149 474 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 PRR13P7-201ENST00000605538 430 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 AC022709.1-201ENST00000615967 87 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 AC006435.5-201ENST00000624486 112 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 AC112487.2-201ENST00000637950 304 ntBASIC1.59□□□□□ -2.15
LIMK1P53667 ICE2P2-201ENST00000483823 2787 ntBASIC1.58□□□□□ -2.16
LIMK1P53667 SNORA20B-201ENST00000384220 132 ntBASIC1.58□□□□□ -2.16
LIMK1P53667 MTND4LP11-201ENST00000422184 280 ntBASIC1.58□□□□□ -2.16
LIMK1P53667 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.58□□□□□ -2.16
LIMK1P53667 SNORD19B-201ENST00000459623 84 ntBASIC1.58□□□□□ -2.16
LIMK1P53667 SNORD116.3-201ENST00000517176 78 ntBASIC1.58□□□□□ -2.16
LIMK1P53667 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.58□□□□□ -2.16
LIMK1P53667 AC093027.1-201ENST00000546698 429 ntBASIC1.58□□□□□ -2.16
LIMK1P53667 AL157834.3-201ENST00000615543 103 ntBASIC1.58□□□□□ -2.16
LIMK1P53667 MIR6779-201ENST00000617283 64 ntBASIC1.58□□□□□ -2.16
LIMK1P53667 U2.1-201ENST00000618978 145 ntBASIC1.58□□□□□ -2.16
LIMK1P53667 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LIMK1P53667 MIR559-201ENST00000385188 96 ntBASIC1.57□□□□□ -2.16
LIMK1P53667 AC010154.1-201ENST00000425857 269 ntBASIC1.57□□□□□ -2.16
LIMK1P53667 AC245047.3-201ENST00000429428 127 ntBASIC1.57□□□□□ -2.16
LIMK1P53667 MRPS10P1-201ENST00000448483 130 ntBASIC1.57□□□□□ -2.16
LIMK1P53667 RNU7-94P-201ENST00000459576 63 ntBASIC1.57□□□□□ -2.16
LIMK1P53667 RNA5SP20-201ENST00000515976 84 ntBASIC1.57□□□□□ -2.16
LIMK1P53667 RNU7-172P-201ENST00000517125 64 ntBASIC1.57□□□□□ -2.16
LIMK1P53667 RNU6-902P-201ENST00000517212 91 ntBASIC1.57□□□□□ -2.16
LIMK1P53667 MIR3618-201ENST00000580330 88 ntBASIC1.57□□□□□ -2.16
LIMK1P53667 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.56□□□□□ -2.16
LIMK1P53667 SNORD33-201ENST00000362761 85 ntBASIC1.56□□□□□ -2.16
LIMK1P53667 RNU6-271P-201ENST00000363858 105 ntBASIC1.56□□□□□ -2.16
LIMK1P53667 MT-TD-201ENST00000387419 68 ntBASIC1.56□□□□□ -2.16
LIMK1P53667 RNU11-5P-201ENST00000391216 129 ntBASIC1.56□□□□□ -2.16
LIMK1P53667 RN7SKP200-201ENST00000410564 320 ntBASIC1.56□□□□□ -2.16
LIMK1P53667 FCF1P4-201ENST00000448326 183 ntBASIC1.56□□□□□ -2.16
LIMK1P53667 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.56□□□□□ -2.16
LIMK1P53667 MTND3P22-201ENST00000510932 243 ntBASIC1.56□□□□□ -2.16
LIMK1P53667 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.56□□□□□ -2.16
LIMK1P53667 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.56□□□□□ -2.16
LIMK1P53667 AL442163.3-201ENST00000554110 156 ntBASIC1.56□□□□□ -2.16
LIMK1P53667 AL929325.1-201ENST00000603096 117 ntBASIC1.56□□□□□ -2.16
LIMK1P53667 AC073413.2-201ENST00000604332 360 ntBASIC1.56□□□□□ -2.16
LIMK1P53667 U6.108-201ENST00000637764 58 ntBASIC1.56□□□□□ -2.16
LIMK1P53667 RNU4-73P-201ENST00000363164 141 ntBASIC1.55□□□□□ -2.16
LIMK1P53667 RNA5SP325-201ENST00000363756 130 ntBASIC1.55□□□□□ -2.16
LIMK1P53667 RNA5SP363-201ENST00000365072 115 ntBASIC1.55□□□□□ -2.16
LIMK1P53667 MRPL42P3-201ENST00000401492 326 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms