Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RPS29P30-201ENST00000600975 111 ntBASIC1.58□□□□□ -2.16
HCFC1P51610 PRR13P7-201ENST00000605538 430 ntBASIC1.58□□□□□ -2.16
HCFC1P51610 AC005828.6-201ENST00000606610 232 ntBASIC1.58□□□□□ -2.16
HCFC1P51610 AC008873.1-201ENST00000625051 138 ntBASIC1.58□□□□□ -2.16
HCFC1P51610 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
HCFC1P51610 RNY1P10-201ENST00000363268 113 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 SNORD114-6-201ENST00000364393 72 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 Y_RNA.462-201ENST00000384268 102 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 Y_RNA.574-201ENST00000384766 95 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 RNU2-40P-201ENST00000410833 196 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 IPO7P1-201ENST00000442031 636 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 SUMO1P2-201ENST00000452524 304 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 RPL26P26-201ENST00000480251 434 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.57□□□□□ -2.16
HCFC1P51610 RNU6-496P-201ENST00000516145 99 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 Y_RNA.720-201ENST00000517166 92 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.57□□□□□ -2.16
HCFC1P51610 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.57□□□□□ -2.16
HCFC1P51610 MIR3674-201ENST00000636576 68 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HCFC1P51610 RNU6-196P-201ENST00000384315 107 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 Y_RNA.618-201ENST00000410949 107 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 AC060773.1-201ENST00000421698 310 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 MRPS10P1-201ENST00000448483 130 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 LINC01399-202ENST00000458450 244 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 RNU6-221P-201ENST00000459541 99 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 AC011406.1-201ENST00000512440 370 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 RNU6-1338P-201ENST00000516328 91 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.57□□□□□ -2.16
HCFC1P51610 MIR5089-201ENST00000580047 84 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 AC104695.3-201ENST00000604052 296 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 AL353149.1-201ENST00000610667 244 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 AC006435.5-201ENST00000624486 112 ntBASIC1.57□□□□□ -2.16
HCFC1P51610 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
HCFC1P51610 AL359851.1-201ENST00000569460 4997 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 Y_RNA.19-201ENST00000362462 99 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 Y_RNA.64-201ENST00000362845 102 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 RNU6-770P-201ENST00000363929 105 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 RNU6-290P-201ENST00000365212 101 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
HCFC1P51610 MIR1302-6-201ENST00000408466 90 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 AC069257.2-201ENST00000441819 155 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 RNU7-95P-201ENST00000459222 64 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 RPS27P22-201ENST00000478056 241 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 RPL36AP21-201ENST00000490372 323 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 RNY3P15-201ENST00000516297 97 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 AL137100.2-201ENST00000555786 315 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 AL359821.1-201ENST00000605519 182 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.56□□□□□ -2.16
HCFC1P51610 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HCFC1P51610 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
HCFC1P51610 RNU6-879P-201ENST00000364328 108 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 Y_RNA.368-201ENST00000365547 113 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 RNU6-20P-201ENST00000384106 107 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 MT-TW-201ENST00000387382 68 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 SNORA40.19-201ENST00000390846 128 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 RNU11-3P-201ENST00000391111 133 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 AC010469.2-201ENST00000496412 480 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 AC005840.1-201ENST00000498412 377 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 RNU6-966P-201ENST00000516479 104 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 RNU7-110P-201ENST00000516891 62 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 RNU2-12P-201ENST00000517216 168 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.56□□□□□ -2.16
HCFC1P51610 MIR3126-201ENST00000577443 74 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 MIR4529-201ENST00000578110 78 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 AC130454.1-201ENST00000622948 401 ntBASIC1.56□□□□□ -2.16
HCFC1P51610 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HCFC1P51610 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HCFC1P51610 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.55□□□□□ -2.16
HCFC1P51610 RNU6-661P-201ENST00000362409 107 ntBASIC1.55□□□□□ -2.16
HCFC1P51610 SNORA27.1-201ENST00000362604 124 ntBASIC1.55□□□□□ -2.16
HCFC1P51610 RNU6-626P-201ENST00000363354 107 ntBASIC1.55□□□□□ -2.16
HCFC1P51610 RNU1-52P-201ENST00000384190 164 ntBASIC1.55□□□□□ -2.16
HCFC1P51610 RNU6-708P-201ENST00000384217 107 ntBASIC1.55□□□□□ -2.16
HCFC1P51610 RNU6-505P-201ENST00000384427 107 ntBASIC1.55□□□□□ -2.16
HCFC1P51610 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
HCFC1P51610 MIR1185-2-201ENST00000408687 86 ntBASIC1.55□□□□□ -2.16
HCFC1P51610 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
HCFC1P51610 AC016717.1-201ENST00000448918 286 ntBASIC1.55□□□□□ -2.16
HCFC1P51610 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.55□□□□□ -2.16
HCFC1P51610 MIR502-201ENST00000606349 86 ntBASIC1.55□□□□□ -2.16
HCFC1P51610 AC006001.4-201ENST00000622243 395 ntBASIC1.55□□□□□ -2.16
HCFC1P51610 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.55□□□□□ -2.16
HCFC1P51610 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.55□□□□□ -2.16
HCFC1P51610 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.55□□□□□ -2.16
HCFC1P51610 Y_RNA.16-201ENST00000362421 102 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 U3.8-201ENST00000363675 217 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 RNA5SP493-201ENST00000364115 91 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 Y_RNA.230-201ENST00000364348 109 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 Y_RNA.329-201ENST00000365209 107 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 RNU6-407P-201ENST00000365280 104 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 RNU6-1310P-201ENST00000384153 107 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 RNU6-376P-201ENST00000384731 106 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 AL031003.1-201ENST00000404229 172 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 AC096920.1-201ENST00000423991 241 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 TOMM22P2-201ENST00000430735 237 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 AC005002.2-201ENST00000438228 269 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 RPL23AP3-201ENST00000453844 468 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms