Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 MT-TT-201ENST00000387460 66 ntBASIC1.61□□□□□ -2.15
ATRXP46100 RNU5A-5P-201ENST00000411054 116 ntBASIC1.61□□□□□ -2.15
ATRXP46100 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.61□□□□□ -2.15
ATRXP46100 AC078809.1-201ENST00000427601 140 ntBASIC1.61□□□□□ -2.15
ATRXP46100 Y_RNA.637-201ENST00000459424 114 ntBASIC1.61□□□□□ -2.15
ATRXP46100 HMGB3P17-201ENST00000504195 649 ntBASIC1.61□□□□□ -2.15
ATRXP46100 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
ATRXP46100 AL355297.3-201ENST00000604082 446 ntBASIC1.61□□□□□ -2.15
ATRXP46100 SNORD113-5-201ENST00000607261 78 ntBASIC1.61□□□□□ -2.15
ATRXP46100 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
ATRXP46100 uc_338.14-201ENST00000613162 166 ntBASIC1.61□□□□□ -2.15
ATRXP46100 Y_RNA.65-201ENST00000362846 100 ntBASIC1.61□□□□□ -2.15
ATRXP46100 Y_RNA.288-201ENST00000364854 92 ntBASIC1.61□□□□□ -2.15
ATRXP46100 AL357139.1-201ENST00000407792 426 ntBASIC1.61□□□□□ -2.15
ATRXP46100 MIR1302-3-201ENST00000408128 138 ntBASIC1.61□□□□□ -2.15
ATRXP46100 RNU6-1077P-201ENST00000410506 102 ntBASIC1.61□□□□□ -2.15
ATRXP46100 Y_RNA.793-201ENST00000411222 111 ntBASIC1.61□□□□□ -2.15
ATRXP46100 RNU6-1199P-201ENST00000411249 104 ntBASIC1.61□□□□□ -2.15
ATRXP46100 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.61□□□□□ -2.15
ATRXP46100 RN7SL274P-201ENST00000492268 272 ntBASIC1.61□□□□□ -2.15
ATRXP46100 SEPT14P8-201ENST00000508026 178 ntBASIC1.61□□□□□ -2.15
ATRXP46100 RNU6-1023P-201ENST00000516137 106 ntBASIC1.61□□□□□ -2.15
ATRXP46100 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.61□□□□□ -2.15
ATRXP46100 AC078938.1-201ENST00000620993 318 ntBASIC1.61□□□□□ -2.15
ATRXP46100 RNU6-793P-201ENST00000384233 104 ntBASIC1.6□□□□□ -2.15
ATRXP46100 Y_RNA.518-201ENST00000384552 113 ntBASIC1.6□□□□□ -2.15
ATRXP46100 MTND4LP30-201ENST00000454092 297 ntBASIC1.6□□□□□ -2.15
ATRXP46100 RNU5F-4P-201ENST00000516581 114 ntBASIC1.6□□□□□ -2.15
ATRXP46100 RNU7-110P-201ENST00000516891 62 ntBASIC1.6□□□□□ -2.15
ATRXP46100 SCARNA11.3-201ENST00000517276 130 ntBASIC1.6□□□□□ -2.15
ATRXP46100 NACAP3-201ENST00000552100 481 ntBASIC1.6□□□□□ -2.15
ATRXP46100 AL391813.1-201ENST00000603098 260 ntBASIC1.6□□□□□ -2.15
ATRXP46100 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.6□□□□□ -2.15
ATRXP46100 RNU1-76P-201ENST00000362903 159 ntBASIC1.6□□□□□ -2.15
ATRXP46100 Y_RNA.477-201ENST00000384352 108 ntBASIC1.6□□□□□ -2.15
ATRXP46100 SNORD14D-201ENST00000384390 87 ntBASIC1.6□□□□□ -2.15
ATRXP46100 RNU6-847P-201ENST00000411115 108 ntBASIC1.6□□□□□ -2.15
ATRXP46100 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.6□□□□□ -2.15
ATRXP46100 SNORA70.14-201ENST00000516205 110 ntBASIC1.6□□□□□ -2.15
ATRXP46100 RNU6-1098P-201ENST00000516772 96 ntBASIC1.6□□□□□ -2.15
ATRXP46100 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.6□□□□□ -2.15
ATRXP46100 AC090616.3-201ENST00000582184 217 ntBASIC1.6□□□□□ -2.15
ATRXP46100 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
ATRXP46100 Y_RNA.101-201ENST00000363154 102 ntBASIC1.59□□□□□ -2.15
ATRXP46100 SNORD31B-201ENST00000364977 69 ntBASIC1.59□□□□□ -2.15
ATRXP46100 RNU6-622P-201ENST00000384272 103 ntBASIC1.59□□□□□ -2.15
ATRXP46100 AL133475.1-201ENST00000404414 305 ntBASIC1.59□□□□□ -2.15
ATRXP46100 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.59□□□□□ -2.15
ATRXP46100 AL161651.1-201ENST00000440882 223 ntBASIC1.59□□□□□ -2.15
ATRXP46100 RPL23AP3-201ENST00000453844 468 ntBASIC1.59□□□□□ -2.15
ATRXP46100 snoU13.6-201ENST00000458785 104 ntBASIC1.59□□□□□ -2.15
ATRXP46100 RPL21P104-201ENST00000464143 478 ntBASIC1.59□□□□□ -2.15
ATRXP46100 SNORA70.12-201ENST00000516084 153 ntBASIC1.59□□□□□ -2.15
ATRXP46100 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.59□□□□□ -2.15
ATRXP46100 AP004607.1-201ENST00000524456 203 ntBASIC1.59□□□□□ -2.15
ATRXP46100 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.59□□□□□ -2.15
ATRXP46100 AC007229.1-201ENST00000590455 412 ntBASIC1.59□□□□□ -2.15
ATRXP46100 CENPCP1-201ENST00000533085 2578 ntBASIC1.59□□□□□ -2.15
ATRXP46100 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.16
ATRXP46100 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
ATRXP46100 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
ATRXP46100 RNA5SP390-201ENST00000410191 113 ntBASIC1.59□□□□□ -2.16
ATRXP46100 RPS23P5-201ENST00000495419 428 ntBASIC1.59□□□□□ -2.16
ATRXP46100 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.59□□□□□ -2.16
ATRXP46100 RNA5SP330-201ENST00000517096 96 ntBASIC1.59□□□□□ -2.16
ATRXP46100 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.59□□□□□ -2.16
ATRXP46100 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.59□□□□□ -2.16
ATRXP46100 MIR338-201ENST00000636369 67 ntBASIC1.59□□□□□ -2.16
ATRXP46100 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.59□□□□□ -2.16
ATRXP46100 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
ATRXP46100 MIR6073-201ENST00000352083 89 ntBASIC1.58□□□□□ -2.16
ATRXP46100 RNU4-15P-201ENST00000362613 141 ntBASIC1.58□□□□□ -2.16
ATRXP46100 RNU6-378P-201ENST00000384324 107 ntBASIC1.58□□□□□ -2.16
ATRXP46100 SNORA36B-201ENST00000410438 131 ntBASIC1.58□□□□□ -2.16
ATRXP46100 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.58□□□□□ -2.16
ATRXP46100 AL135790.2-201ENST00000437701 267 ntBASIC1.58□□□□□ -2.16
ATRXP46100 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
ATRXP46100 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.58□□□□□ -2.16
ATRXP46100 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.58□□□□□ -2.16
ATRXP46100 MIR5692C2-201ENST00000577959 77 ntBASIC1.58□□□□□ -2.16
ATRXP46100 MIR5188-201ENST00000583467 113 ntBASIC1.58□□□□□ -2.16
ATRXP46100 U2.14-201ENST00000615943 113 ntBASIC1.58□□□□□ -2.16
ATRXP46100 Y_RNA.136-201ENST00000363444 102 ntBASIC1.58□□□□□ -2.16
ATRXP46100 SNORD87-201ENST00000364849 89 ntBASIC1.58□□□□□ -2.16
ATRXP46100 RNU6-1180P-201ENST00000364935 107 ntBASIC1.58□□□□□ -2.16
ATRXP46100 RNU6-102P-201ENST00000384485 104 ntBASIC1.58□□□□□ -2.16
ATRXP46100 MIR591-201ENST00000385290 95 ntBASIC1.58□□□□□ -2.16
ATRXP46100 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.58□□□□□ -2.16
ATRXP46100 Y_RNA.597-201ENST00000410463 100 ntBASIC1.58□□□□□ -2.16
ATRXP46100 CYCSP48-201ENST00000417124 323 ntBASIC1.58□□□□□ -2.16
ATRXP46100 HMGN2P34-201ENST00000437647 269 ntBASIC1.58□□□□□ -2.16
ATRXP46100 RNU7-57P-201ENST00000459540 60 ntBASIC1.58□□□□□ -2.16
ATRXP46100 AP001324.2-201ENST00000461163 319 ntBASIC1.58□□□□□ -2.16
ATRXP46100 AP000870.1-201ENST00000472927 406 ntBASIC1.58□□□□□ -2.16
ATRXP46100 HMGN2P9-201ENST00000476875 229 ntBASIC1.58□□□□□ -2.16
ATRXP46100 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.58□□□□□ -2.16
ATRXP46100 PRELID2P1-201ENST00000552837 301 ntBASIC1.58□□□□□ -2.16
ATRXP46100 AC233702.2-202ENST00000562547 291 ntBASIC1.58□□□□□ -2.16
ATRXP46100 AL356157.2-201ENST00000605122 111 ntBASIC1.58□□□□□ -2.16
ATRXP46100 AC004792.1-201ENST00000614523 137 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms