Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC018462.2-201ENST00000605375 395 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 AC005014.2-201ENST00000607795 599 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 AL357075.2-201ENST00000614906 189 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 AC104260.1-201ENST00000616660 539 ntBASIC0.87□□□□□ -2.27
FDFT1P37268 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
FDFT1P37268 AC005592.1-201ENST00000566527 1640 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 SNORA1B-201ENST00000362535 133 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 SNORA27.1-201ENST00000362604 124 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 RNU6-1080P-201ENST00000383982 107 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 Y_RNA.498-201ENST00000384460 102 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 Y_RNA.516-201ENST00000384541 124 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 SNORD41-201ENST00000386967 70 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 MIR1287-201ENST00000408492 90 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 AC063976.4-201ENST00000421971 163 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.86□□□□□ -2.27
FDFT1P37268 RPS29P25-201ENST00000481709 171 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 OR9P1P-201ENST00000496431 281 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 RNU6-917P-201ENST00000516294 104 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 RNU6-1291P-201ENST00000516591 104 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 RN7SKP49-201ENST00000516675 260 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 MIR5701-3-201ENST00000578890 82 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 MIR5701-1-201ENST00000585138 82 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 AC080078.2-201ENST00000603766 501 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 MIR5701-2-201ENST00000615634 82 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 MIR3688-2-201ENST00000636963 87 ntBASIC0.86□□□□□ -2.27
FDFT1P37268 RNA5SP361-201ENST00000362686 118 ntBASIC0.85□□□□□ -2.27
FDFT1P37268 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.85□□□□□ -2.27
FDFT1P37268 RNU6-1145P-201ENST00000384246 107 ntBASIC0.85□□□□□ -2.27
FDFT1P37268 Y_RNA.557-201ENST00000384680 107 ntBASIC0.85□□□□□ -2.27
FDFT1P37268 MIR1276-201ENST00000408707 83 ntBASIC0.85□□□□□ -2.27
FDFT1P37268 AC074085.1-201ENST00000413598 418 ntBASIC0.85□□□□□ -2.27
FDFT1P37268 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.85□□□□□ -2.27
FDFT1P37268 AL353997.1-201ENST00000432936 108 ntBASIC0.85□□□□□ -2.27
FDFT1P37268 AC245047.7-201ENST00000440265 293 ntBASIC0.85□□□□□ -2.27
FDFT1P37268 UBE2V1P7-201ENST00000446395 340 ntBASIC0.85□□□□□ -2.27
FDFT1P37268 PCNPP5-201ENST00000452246 481 ntBASIC0.85□□□□□ -2.27
FDFT1P37268 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.85□□□□□ -2.27
FDFT1P37268 AC026782.1-201ENST00000512952 449 ntBASIC0.85□□□□□ -2.27
FDFT1P37268 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
FDFT1P37268 RNU6-1278P-201ENST00000516130 107 ntBASIC0.85□□□□□ -2.27
FDFT1P37268 RNU6-1016P-201ENST00000516689 94 ntBASIC0.85□□□□□ -2.27
FDFT1P37268 AP002004.2-201ENST00000531656 154 ntBASIC0.85□□□□□ -2.27
FDFT1P37268 AC091178.2-201ENST00000584401 117 ntBASIC0.85□□□□□ -2.27
FDFT1P37268 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
FDFT1P37268 RNY1P16-201ENST00000363063 111 ntBASIC0.84□□□□□ -2.27
FDFT1P37268 SNORD114-24-201ENST00000365029 72 ntBASIC0.84□□□□□ -2.27
FDFT1P37268 Y_RNA.318-201ENST00000365131 97 ntBASIC0.84□□□□□ -2.27
FDFT1P37268 SNORA2.2-201ENST00000365473 135 ntBASIC0.84□□□□□ -2.27
FDFT1P37268 Y_RNA.594-201ENST00000410373 140 ntBASIC0.84□□□□□ -2.27
FDFT1P37268 RNU6-1050P-201ENST00000410388 107 ntBASIC0.84□□□□□ -2.27
FDFT1P37268 MTCYBP10-201ENST00000424905 650 ntBASIC0.84□□□□□ -2.27
FDFT1P37268 AC233266.1-201ENST00000454518 96 ntBASIC0.84□□□□□ -2.27
FDFT1P37268 RPL39P39-201ENST00000455840 151 ntBASIC0.84□□□□□ -2.27
FDFT1P37268 RNU6-329P-201ENST00000459618 107 ntBASIC0.84□□□□□ -2.27
FDFT1P37268 AC022493.2-201ENST00000506122 481 ntBASIC0.84□□□□□ -2.27
FDFT1P37268 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.84□□□□□ -2.27
FDFT1P37268 AC074133.1-201ENST00000515696 183 ntBASIC0.84□□□□□ -2.27
FDFT1P37268 SCARNA16.2-201ENST00000516520 172 ntBASIC0.84□□□□□ -2.27
FDFT1P37268 AC022868.1-201ENST00000517767 391 ntBASIC0.84□□□□□ -2.27
FDFT1P37268 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.84□□□□□ -2.27
FDFT1P37268 AC018448.1-201ENST00000552843 316 ntBASIC0.84□□□□□ -2.27
FDFT1P37268 AC242852.1-201ENST00000612151 96 ntBASIC0.84□□□□□ -2.27
FDFT1P37268 MIR6504-201ENST00000613520 61 ntBASIC0.84□□□□□ -2.27
FDFT1P37268 AC244015.1-201ENST00000622301 99 ntBASIC0.84□□□□□ -2.27
FDFT1P37268 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
FDFT1P37268 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 RNU6-874P-201ENST00000362390 105 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 Y_RNA.191-201ENST00000363972 113 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 RNU6-1215P-201ENST00000384441 102 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 RNU6-136P-201ENST00000384663 107 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 MIR200A-201ENST00000384875 90 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 RNU6-510P-201ENST00000391239 108 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 RNA5SP482-201ENST00000391269 118 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 MIR548F5-201ENST00000408421 86 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 RNA5SP475-201ENST00000410568 110 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 RPS3AP52-201ENST00000435639 297 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 AC104332.1-201ENST00000440471 797 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 AL137792.2-201ENST00000443484 235 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 RNU6-625P-201ENST00000459412 107 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.83□□□□□ -2.28
FDFT1P37268 Y_RNA.670-201ENST00000516255 105 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 AC105029.1-201ENST00000520250 669 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.83□□□□□ -2.28
FDFT1P37268 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.83□□□□□ -2.28
FDFT1P37268 AC018638.8-201ENST00000588755 281 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 AL357312.1-201ENST00000603879 298 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 AC090517.2-201ENST00000614966 680 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 AC127459.3-201ENST00000624328 466 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 U6.115-201ENST00000636045 103 ntBASIC0.83□□□□□ -2.28
FDFT1P37268 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
FDFT1P37268 Y_RNA.86-201ENST00000363020 111 ntBASIC0.82□□□□□ -2.28
FDFT1P37268 Y_RNA.224-201ENST00000364308 111 ntBASIC0.82□□□□□ -2.28
FDFT1P37268 Y_RNA.358-201ENST00000365491 99 ntBASIC0.82□□□□□ -2.28
FDFT1P37268 MIR548F1-201ENST00000408667 84 ntBASIC0.82□□□□□ -2.28
FDFT1P37268 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.82□□□□□ -2.28
FDFT1P37268 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.82□□□□□ -2.28
FDFT1P37268 AC092423.1-201ENST00000430165 186 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms