Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SDHAP31040 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.61□□□□□ -1.99
SDHAP31040 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
SDHAP31040 RNU6-525P-201ENST00000363685 104 ntBASIC2.61□□□□□ -1.99
SDHAP31040 RNA5SP467-201ENST00000391274 118 ntBASIC2.61□□□□□ -1.99
SDHAP31040 AL512604.1-201ENST00000404812 257 ntBASIC2.61□□□□□ -1.99
SDHAP31040 Y_RNA.621-201ENST00000411065 96 ntBASIC2.61□□□□□ -1.99
SDHAP31040 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.61□□□□□ -1.99
SDHAP31040 RPS4XP11-201ENST00000446897 772 ntBASIC2.61□□□□□ -1.99
SDHAP31040 RNU1-131P-201ENST00000458943 161 ntBASIC2.61□□□□□ -1.99
SDHAP31040 AC005840.1-201ENST00000498412 377 ntBASIC2.61□□□□□ -1.99
SDHAP31040 YWHAEP4-201ENST00000505390 198 ntBASIC2.61□□□□□ -1.99
SDHAP31040 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.61□□□□□ -1.99
SDHAP31040 MTND5P41-201ENST00000517498 206 ntBASIC2.61□□□□□ -1.99
SDHAP31040 AC109810.1-201ENST00000534066 224 ntBASIC2.61□□□□□ -1.99
SDHAP31040 AL359075.3-201ENST00000613288 217 ntBASIC2.61□□□□□ -1.99
SDHAP31040 MIR338-201ENST00000636369 67 ntBASIC2.61□□□□□ -1.99
SDHAP31040 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.61□□□□□ -1.99
SDHAP31040 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SDHAP31040 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SDHAP31040 RNU4-84P-201ENST00000364200 139 ntBASIC2.6□□□□□ -1.99
SDHAP31040 RNU6-728P-201ENST00000365375 104 ntBASIC2.6□□□□□ -1.99
SDHAP31040 MIR512-1-201ENST00000384913 84 ntBASIC2.6□□□□□ -1.99
SDHAP31040 RNU6-1228P-201ENST00000391014 107 ntBASIC2.6□□□□□ -1.99
SDHAP31040 RPS29P6-201ENST00000438196 145 ntBASIC2.6□□□□□ -1.99
SDHAP31040 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.6□□□□□ -1.99
SDHAP31040 AL109933.2-201ENST00000452651 260 ntBASIC2.6□□□□□ -1.99
SDHAP31040 RN7SL636P-201ENST00000497504 294 ntBASIC2.6□□□□□ -1.99
SDHAP31040 RNU1-142P-201ENST00000516682 145 ntBASIC2.6□□□□□ -1.99
SDHAP31040 RNU6-826P-201ENST00000516827 104 ntBASIC2.6□□□□□ -1.99
SDHAP31040 AC011604.1-201ENST00000545978 196 ntBASIC2.6□□□□□ -1.99
SDHAP31040 MIR4431-201ENST00000579990 94 ntBASIC2.6□□□□□ -1.99
SDHAP31040 AL929325.1-201ENST00000603096 117 ntBASIC2.6□□□□□ -1.99
SDHAP31040 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.6□□□□□ -1.99
SDHAP31040 AC091953.5-201ENST00000622919 233 ntBASIC2.6□□□□□ -1.99
SDHAP31040 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SDHAP31040 RNU6-23P-201ENST00000363283 107 ntBASIC2.59□□□□□ -1.99
SDHAP31040 RNU6-449P-201ENST00000383914 107 ntBASIC2.59□□□□□ -1.99
SDHAP31040 RNU1-109P-201ENST00000383960 147 ntBASIC2.59□□□□□ -1.99
SDHAP31040 MIR520G-201ENST00000385064 90 ntBASIC2.59□□□□□ -1.99
SDHAP31040 MIR181B1-201ENST00000385240 110 ntBASIC2.59□□□□□ -1.99
SDHAP31040 SNORD88.1-201ENST00000408684 91 ntBASIC2.59□□□□□ -1.99
SDHAP31040 RN7SKP284-201ENST00000411002 343 ntBASIC2.59□□□□□ -1.99
SDHAP31040 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.59□□□□□ -1.99
SDHAP31040 AL392103.1-201ENST00000447000 198 ntBASIC2.59□□□□□ -1.99
SDHAP31040 BX510359.1-201ENST00000456973 237 ntBASIC2.59□□□□□ -1.99
SDHAP31040 AC107027.2-201ENST00000512197 115 ntBASIC2.59□□□□□ -1.99
SDHAP31040 RNU7-200P-201ENST00000516105 62 ntBASIC2.59□□□□□ -1.99
SDHAP31040 RNU7-99P-201ENST00000516271 62 ntBASIC2.59□□□□□ -1.99
SDHAP31040 RNU6-346P-201ENST00000516288 111 ntBASIC2.59□□□□□ -1.99
SDHAP31040 RNU6-1096P-201ENST00000517089 102 ntBASIC2.59□□□□□ -1.99
SDHAP31040 CYCSP26-201ENST00000534107 320 ntBASIC2.59□□□□□ -1.99
SDHAP31040 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.59□□□□□ -1.99
SDHAP31040 MTND1P7-201ENST00000632801 297 ntBASIC2.59□□□□□ -1.99
SDHAP31040 AC009487.2-201ENST00000420969 6821 ntBASIC2.59□□□□□ -2
SDHAP31040 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.59□□□□□ -2
SDHAP31040 RNU6-674P-201ENST00000363831 107 ntBASIC2.58□□□□□ -2
SDHAP31040 Y_RNA.203-201ENST00000364106 102 ntBASIC2.58□□□□□ -2
SDHAP31040 RNA5SP493-201ENST00000364115 91 ntBASIC2.58□□□□□ -2
SDHAP31040 RNU1-96P-201ENST00000364163 162 ntBASIC2.58□□□□□ -2
SDHAP31040 RNU6-1130P-201ENST00000365434 107 ntBASIC2.58□□□□□ -2
SDHAP31040 RNY1P5-201ENST00000383890 115 ntBASIC2.58□□□□□ -2
SDHAP31040 RNU6-851P-201ENST00000384565 107 ntBASIC2.58□□□□□ -2
SDHAP31040 MIR15B-201ENST00000385045 98 ntBASIC2.58□□□□□ -2
SDHAP31040 MIR1278-201ENST00000408753 81 ntBASIC2.58□□□□□ -2
SDHAP31040 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.58□□□□□ -2
SDHAP31040 AC023449.1-201ENST00000454464 154 ntBASIC2.58□□□□□ -2
SDHAP31040 AC233266.1-201ENST00000454518 96 ntBASIC2.58□□□□□ -2
SDHAP31040 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.58□□□□□ -2
SDHAP31040 RNU6-789P-201ENST00000517105 102 ntBASIC2.58□□□□□ -2
SDHAP31040 MIR2681-201ENST00000581814 105 ntBASIC2.58□□□□□ -2
SDHAP31040 AC007179.3-201ENST00000604976 235 ntBASIC2.58□□□□□ -2
SDHAP31040 YPEL5P2-201ENST00000605553 359 ntBASIC2.58□□□□□ -2
SDHAP31040 AC093732.2-201ENST00000607950 274 ntBASIC2.58□□□□□ -2
SDHAP31040 AL353149.1-201ENST00000610667 244 ntBASIC2.58□□□□□ -2
SDHAP31040 AC242852.1-201ENST00000612151 96 ntBASIC2.58□□□□□ -2
SDHAP31040 AC022202.1-201ENST00000613515 211 ntBASIC2.58□□□□□ -2
SDHAP31040 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.58□□□□□ -2
SDHAP31040 AC244015.1-201ENST00000622301 99 ntBASIC2.58□□□□□ -2
SDHAP31040 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.58□□□□□ -2
SDHAP31040 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SDHAP31040 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
SDHAP31040 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.57□□□□□ -2
SDHAP31040 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.57□□□□□ -2
SDHAP31040 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.57□□□□□ -2
SDHAP31040 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
SDHAP31040 AC096644.4-201ENST00000563417 2912 ntBASIC2.57□□□□□ -2
SDHAP31040 SNORA8-201ENST00000384574 139 ntBASIC2.57□□□□□ -2
SDHAP31040 MIR483-201ENST00000385070 76 ntBASIC2.57□□□□□ -2
SDHAP31040 Y_RNA.587-201ENST00000391210 103 ntBASIC2.57□□□□□ -2
SDHAP31040 RNA5SP496-201ENST00000391240 109 ntBASIC2.57□□□□□ -2
SDHAP31040 AC006461.1-201ENST00000412637 326 ntBASIC2.57□□□□□ -2
SDHAP31040 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.57□□□□□ -2
SDHAP31040 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
SDHAP31040 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.56□□□□□ -2
SDHAP31040 RNU6-862P-201ENST00000362804 105 ntBASIC2.56□□□□□ -2
SDHAP31040 Y_RNA.267-201ENST00000364679 109 ntBASIC2.56□□□□□ -2
SDHAP31040 RNU6-239P-201ENST00000390990 99 ntBASIC2.56□□□□□ -2
SDHAP31040 Y_RNA.622-201ENST00000411091 108 ntBASIC2.56□□□□□ -2
SDHAP31040 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms