Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RNU2-56P-201ENST00000516826 190 ntBASIC3.39□□□□□ -1.87
LIG1P18858 MIR378D2-201ENST00000580636 98 ntBASIC3.39□□□□□ -1.87
LIG1P18858 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.39□□□□□ -1.87
LIG1P18858 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.39□□□□□ -1.87
LIG1P18858 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.39□□□□□ -1.87
LIG1P18858 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
LIG1P18858 AL356292.1-201ENST00000283110 373 ntBASIC3.38□□□□□ -1.87
LIG1P18858 MIR22-201ENST00000362190 85 ntBASIC3.38□□□□□ -1.87
LIG1P18858 VTRNA1-1-201ENST00000363120 99 ntBASIC3.38□□□□□ -1.87
LIG1P18858 RNY1P11-201ENST00000363759 113 ntBASIC3.38□□□□□ -1.87
LIG1P18858 RNU6-944P-201ENST00000364023 107 ntBASIC3.38□□□□□ -1.87
LIG1P18858 RNU6-1274P-201ENST00000384557 107 ntBASIC3.38□□□□□ -1.87
LIG1P18858 SNORA79-201ENST00000408376 140 ntBASIC3.38□□□□□ -1.87
LIG1P18858 Y_RNA.622-201ENST00000411091 108 ntBASIC3.38□□□□□ -1.87
LIG1P18858 RNU6-57P-201ENST00000411348 103 ntBASIC3.38□□□□□ -1.87
LIG1P18858 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.38□□□□□ -1.87
LIG1P18858 AC010531.2-201ENST00000465012 153 ntBASIC3.38□□□□□ -1.87
LIG1P18858 ATP5EP1-201ENST00000510257 156 ntBASIC3.38□□□□□ -1.87
LIG1P18858 RN7SKP179-201ENST00000516126 217 ntBASIC3.38□□□□□ -1.87
LIG1P18858 RNU6-948P-201ENST00000516374 107 ntBASIC3.38□□□□□ -1.87
LIG1P18858 AC018630.3-201ENST00000542637 96 ntBASIC3.38□□□□□ -1.87
LIG1P18858 MIR4325-201ENST00000583049 90 ntBASIC3.38□□□□□ -1.87
LIG1P18858 AL021707.8-201ENST00000609428 183 ntBASIC3.38□□□□□ -1.87
LIG1P18858 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
LIG1P18858 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.37□□□□□ -1.87
LIG1P18858 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.37□□□□□ -1.87
LIG1P18858 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LIG1P18858 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LIG1P18858 AL035425.3-201ENST00000564206 4996 ntBASIC3.37□□□□□ -1.87
LIG1P18858 SNORA71.1-201ENST00000364523 117 ntBASIC3.37□□□□□ -1.87
LIG1P18858 MIR181A2-201ENST00000384863 110 ntBASIC3.37□□□□□ -1.87
LIG1P18858 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.37□□□□□ -1.87
LIG1P18858 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.37□□□□□ -1.87
LIG1P18858 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.37□□□□□ -1.87
LIG1P18858 AL160236.1-201ENST00000556317 195 ntBASIC3.37□□□□□ -1.87
LIG1P18858 AC120024.3-201ENST00000603167 156 ntBASIC3.37□□□□□ -1.87
LIG1P18858 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
LIG1P18858 MIR622-201ENST00000638396 96 ntBASIC3.37□□□□□ -1.87
LIG1P18858 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.36□□□□□ -1.87
LIG1P18858 RNU6-1082P-201ENST00000364574 107 ntBASIC3.36□□□□□ -1.87
LIG1P18858 RNU6-915P-201ENST00000364943 103 ntBASIC3.36□□□□□ -1.87
LIG1P18858 RNU6-117P-201ENST00000365415 107 ntBASIC3.36□□□□□ -1.87
LIG1P18858 RNU6-1056P-201ENST00000383996 107 ntBASIC3.36□□□□□ -1.87
LIG1P18858 RNU6-1235P-201ENST00000384559 107 ntBASIC3.36□□□□□ -1.87
LIG1P18858 AC245047.4-201ENST00000433189 144 ntBASIC3.36□□□□□ -1.87
LIG1P18858 AC016925.1-201ENST00000458303 298 ntBASIC3.36□□□□□ -1.87
LIG1P18858 RNU6-498P-201ENST00000459468 107 ntBASIC3.36□□□□□ -1.87
LIG1P18858 RNU6-197P-201ENST00000516680 100 ntBASIC3.36□□□□□ -1.87
LIG1P18858 SCARNA11.3-201ENST00000517276 130 ntBASIC3.36□□□□□ -1.87
LIG1P18858 AC025647.1-201ENST00000517879 253 ntBASIC3.36□□□□□ -1.87
LIG1P18858 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.36□□□□□ -1.87
LIG1P18858 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LIG1P18858 Z82209.1-201ENST00000422141 2135 ntBASIC3.35□□□□□ -1.87
LIG1P18858 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LIG1P18858 RNU1-72P-201ENST00000362976 153 ntBASIC3.35□□□□□ -1.87
LIG1P18858 RNU6-153P-201ENST00000364422 104 ntBASIC3.35□□□□□ -1.87
LIG1P18858 RNU4-41P-201ENST00000364426 143 ntBASIC3.35□□□□□ -1.87
LIG1P18858 Y_RNA.587-201ENST00000391210 103 ntBASIC3.35□□□□□ -1.87
LIG1P18858 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.35□□□□□ -1.87
LIG1P18858 AC016717.1-201ENST00000448918 286 ntBASIC3.35□□□□□ -1.87
LIG1P18858 SCARNA17.1-201ENST00000516211 143 ntBASIC3.35□□□□□ -1.87
LIG1P18858 SCARNA17.2-201ENST00000516334 143 ntBASIC3.35□□□□□ -1.87
LIG1P18858 Y_RNA.712-201ENST00000517011 92 ntBASIC3.35□□□□□ -1.87
LIG1P18858 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.35□□□□□ -1.87
LIG1P18858 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.35□□□□□ -1.87
LIG1P18858 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.35□□□□□ -1.87
LIG1P18858 AC090049.2-201ENST00000550377 109 ntBASIC3.35□□□□□ -1.87
LIG1P18858 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.35□□□□□ -1.87
LIG1P18858 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.35□□□□□ -1.87
LIG1P18858 AL031274.2-201ENST00000599419 203 ntBASIC3.35□□□□□ -1.87
LIG1P18858 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.35□□□□□ -1.87
LIG1P18858 SCARNA17.4-201ENST00000614296 143 ntBASIC3.35□□□□□ -1.87
LIG1P18858 MIR6733-201ENST00000635723 61 ntBASIC3.35□□□□□ -1.87
LIG1P18858 AC108206.1-201ENST00000570186 4159 ntBASIC3.35□□□□□ -1.87
LIG1P18858 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LIG1P18858 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.34□□□□□ -1.87
LIG1P18858 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LIG1P18858 RNU6-484P-201ENST00000384016 107 ntBASIC3.34□□□□□ -1.87
LIG1P18858 RNA5SP511-201ENST00000410487 115 ntBASIC3.34□□□□□ -1.87
LIG1P18858 RNU2-52P-201ENST00000410680 190 ntBASIC3.34□□□□□ -1.87
LIG1P18858 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.34□□□□□ -1.87
LIG1P18858 AC008134.1-201ENST00000420943 193 ntBASIC3.34□□□□□ -1.87
LIG1P18858 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.34□□□□□ -1.87
LIG1P18858 RNU6-63P-201ENST00000516690 95 ntBASIC3.34□□□□□ -1.87
LIG1P18858 AC090142.3-201ENST00000519012 385 ntBASIC3.34□□□□□ -1.87
LIG1P18858 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.34□□□□□ -1.87
LIG1P18858 AC015720.1-201ENST00000565251 277 ntBASIC3.34□□□□□ -1.87
LIG1P18858 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
LIG1P18858 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.34□□□□□ -1.88
LIG1P18858 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
LIG1P18858 RNU6-978P-201ENST00000364371 103 ntBASIC3.33□□□□□ -1.88
LIG1P18858 SNORA72-201ENST00000384339 132 ntBASIC3.33□□□□□ -1.88
LIG1P18858 Y_RNA.584-201ENST00000391090 114 ntBASIC3.33□□□□□ -1.88
LIG1P18858 MICF-203ENST00000432679 129 ntBASIC3.33□□□□□ -1.88
LIG1P18858 AC104389.3-201ENST00000445629 235 ntBASIC3.33□□□□□ -1.88
LIG1P18858 RNU6-586P-201ENST00000517265 104 ntBASIC3.33□□□□□ -1.88
LIG1P18858 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
LIG1P18858 MIR3616-201ENST00000584070 92 ntBASIC3.33□□□□□ -1.88
LIG1P18858 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.33□□□□□ -1.88
LIG1P18858 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms