Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 SNORD65B-201ENST00000459126 73 ntBASIC1.92□□□□□ -2.1
CDH1P12830 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.92□□□□□ -2.1
CDH1P12830 MTND1P19-201ENST00000511780 315 ntBASIC1.92□□□□□ -2.1
CDH1P12830 SERF1AP1-201ENST00000514575 187 ntBASIC1.92□□□□□ -2.1
CDH1P12830 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH1P12830 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH1P12830 MIR3126-201ENST00000577443 74 ntBASIC1.92□□□□□ -2.1
CDH1P12830 AC026271.5-201ENST00000577873 130 ntBASIC1.92□□□□□ -2.1
CDH1P12830 MIR5089-201ENST00000580047 84 ntBASIC1.92□□□□□ -2.1
CDH1P12830 AC012433.1-201ENST00000588916 398 ntBASIC1.92□□□□□ -2.1
CDH1P12830 SNRPGP19-201ENST00000603826 189 ntBASIC1.92□□□□□ -2.1
CDH1P12830 AC012493.3-201ENST00000604494 112 ntBASIC1.92□□□□□ -2.1
CDH1P12830 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
CDH1P12830 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
CDH1P12830 Y_RNA.329-201ENST00000365209 107 ntBASIC1.91□□□□□ -2.1
CDH1P12830 SNORA20B-201ENST00000384220 132 ntBASIC1.91□□□□□ -2.1
CDH1P12830 AC008134.1-201ENST00000420943 193 ntBASIC1.91□□□□□ -2.1
CDH1P12830 MTCO1P5-201ENST00000433573 344 ntBASIC1.91□□□□□ -2.1
CDH1P12830 RNU1-131P-201ENST00000458943 161 ntBASIC1.91□□□□□ -2.1
CDH1P12830 Y_RNA.680-201ENST00000516441 93 ntBASIC1.91□□□□□ -2.1
CDH1P12830 RNA5SP137-201ENST00000516833 135 ntBASIC1.91□□□□□ -2.1
CDH1P12830 RNU2-31P-201ENST00000516954 155 ntBASIC1.91□□□□□ -2.1
CDH1P12830 SCARNA24.2-201ENST00000516968 130 ntBASIC1.91□□□□□ -2.1
CDH1P12830 MIR3684-201ENST00000579779 74 ntBASIC1.91□□□□□ -2.1
CDH1P12830 MIR3145-201ENST00000580727 82 ntBASIC1.91□□□□□ -2.1
CDH1P12830 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.91□□□□□ -2.1
CDH1P12830 DEFB117-201ENST00000602356 141 ntBASIC1.91□□□□□ -2.1
CDH1P12830 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.91□□□□□ -2.1
CDH1P12830 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.91□□□□□ -2.1
CDH1P12830 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CDH1P12830 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CDH1P12830 RNU6-324P-201ENST00000363957 106 ntBASIC1.9□□□□□ -2.11
CDH1P12830 RNU6-1240P-201ENST00000365155 104 ntBASIC1.9□□□□□ -2.11
CDH1P12830 Y_RNA.350-201ENST00000365409 98 ntBASIC1.9□□□□□ -2.11
CDH1P12830 RNU6-160P-201ENST00000384591 107 ntBASIC1.9□□□□□ -2.11
CDH1P12830 SNORA53-201ENST00000391141 249 ntBASIC1.9□□□□□ -2.11
CDH1P12830 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.9□□□□□ -2.11
CDH1P12830 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.9□□□□□ -2.11
CDH1P12830 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.9□□□□□ -2.11
CDH1P12830 AL121890.1-201ENST00000435457 205 ntBASIC1.9□□□□□ -2.11
CDH1P12830 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CDH1P12830 RNU1-41P-201ENST00000516161 162 ntBASIC1.9□□□□□ -2.11
CDH1P12830 RNU1-48P-201ENST00000516400 162 ntBASIC1.9□□□□□ -2.11
CDH1P12830 AC006006.1-201ENST00000603082 144 ntBASIC1.9□□□□□ -2.11
CDH1P12830 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CDH1P12830 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
CDH1P12830 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.9□□□□□ -2.11
CDH1P12830 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CDH1P12830 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CDH1P12830 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
CDH1P12830 RNU6-1266P-201ENST00000362794 105 ntBASIC1.89□□□□□ -2.11
CDH1P12830 RNU4-80P-201ENST00000363200 141 ntBASIC1.89□□□□□ -2.11
CDH1P12830 Y_RNA.447-201ENST00000384184 113 ntBASIC1.89□□□□□ -2.11
CDH1P12830 MT-TG-201ENST00000387429 68 ntBASIC1.89□□□□□ -2.11
CDH1P12830 Y_RNA.618-201ENST00000410949 107 ntBASIC1.89□□□□□ -2.11
CDH1P12830 RNU2-61P-201ENST00000411069 191 ntBASIC1.89□□□□□ -2.11
CDH1P12830 AL353689.1-201ENST00000438895 199 ntBASIC1.89□□□□□ -2.11
CDH1P12830 SUMO1P2-201ENST00000452524 304 ntBASIC1.89□□□□□ -2.11
CDH1P12830 RPL39P38-201ENST00000467018 153 ntBASIC1.89□□□□□ -2.11
CDH1P12830 AC010598.1-201ENST00000510378 103 ntBASIC1.89□□□□□ -2.11
CDH1P12830 MIR3169-201ENST00000578032 83 ntBASIC1.89□□□□□ -2.11
CDH1P12830 AL031274.2-201ENST00000599419 203 ntBASIC1.89□□□□□ -2.11
CDH1P12830 AL159152.1-201ENST00000635019 2587 ntBASIC1.89□□□□□ -2.11
CDH1P12830 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.88□□□□□ -2.11
CDH1P12830 SNORD114-7-201ENST00000362520 77 ntBASIC1.88□□□□□ -2.11
CDH1P12830 SNORA27.1-201ENST00000362604 124 ntBASIC1.88□□□□□ -2.11
CDH1P12830 Y_RNA.124-201ENST00000363339 93 ntBASIC1.88□□□□□ -2.11
CDH1P12830 RNA5SP493-201ENST00000364115 91 ntBASIC1.88□□□□□ -2.11
CDH1P12830 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
CDH1P12830 AC245102.2-201ENST00000448956 180 ntBASIC1.88□□□□□ -2.11
CDH1P12830 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CDH1P12830 AC011406.1-201ENST00000512440 370 ntBASIC1.88□□□□□ -2.11
CDH1P12830 RNU6-191P-201ENST00000516295 94 ntBASIC1.88□□□□□ -2.11
CDH1P12830 AC110588.1-201ENST00000559699 137 ntBASIC1.88□□□□□ -2.11
CDH1P12830 MIR3128-201ENST00000581957 66 ntBASIC1.88□□□□□ -2.11
CDH1P12830 AC010900.2-201ENST00000604508 210 ntBASIC1.88□□□□□ -2.11
CDH1P12830 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CDH1P12830 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDH1P12830 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.87□□□□□ -2.11
CDH1P12830 SNORD115-3-201ENST00000363100 82 ntBASIC1.87□□□□□ -2.11
CDH1P12830 Y_RNA.188-201ENST00000363952 111 ntBASIC1.87□□□□□ -2.11
CDH1P12830 Y_RNA.287-201ENST00000364853 94 ntBASIC1.87□□□□□ -2.11
CDH1P12830 MIR29C-201ENST00000385231 88 ntBASIC1.87□□□□□ -2.11
CDH1P12830 MIR873-201ENST00000401120 77 ntBASIC1.87□□□□□ -2.11
CDH1P12830 BX510359.4-201ENST00000423750 193 ntBASIC1.87□□□□□ -2.11
CDH1P12830 HMGN2P34-201ENST00000437647 269 ntBASIC1.87□□□□□ -2.11
CDH1P12830 AC091959.1-201ENST00000495857 238 ntBASIC1.87□□□□□ -2.11
CDH1P12830 SUMO2P18-201ENST00000518873 252 ntBASIC1.87□□□□□ -2.11
CDH1P12830 AC027419.1-201ENST00000522976 328 ntBASIC1.87□□□□□ -2.11
CDH1P12830 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.87□□□□□ -2.11
CDH1P12830 RPL21P9-201ENST00000556149 474 ntBASIC1.87□□□□□ -2.11
CDH1P12830 AC037487.3-201ENST00000606668 112 ntBASIC1.87□□□□□ -2.11
CDH1P12830 AL353149.1-201ENST00000610667 244 ntBASIC1.87□□□□□ -2.11
CDH1P12830 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.87□□□□□ -2.11
CDH1P12830 U2.14-201ENST00000615943 113 ntBASIC1.87□□□□□ -2.11
CDH1P12830 AC006435.5-201ENST00000624486 112 ntBASIC1.87□□□□□ -2.11
CDH1P12830 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.87□□□□□ -2.11
CDH1P12830 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CDH1P12830 AC092881.1-201ENST00000638218 2733 ntBASIC1.86□□□□□ -2.11
CDH1P12830 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms