Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
THBS1P07996 RNY3P2-201ENST00000362918 102 ntBASIC3.43□□□□□ -1.86
THBS1P07996 RNU6-442P-201ENST00000383968 104 ntBASIC3.43□□□□□ -1.86
THBS1P07996 Y_RNA.454-201ENST00000384224 113 ntBASIC3.43□□□□□ -1.86
THBS1P07996 RNU6-1186P-201ENST00000410429 97 ntBASIC3.43□□□□□ -1.86
THBS1P07996 Y_RNA.601-201ENST00000410500 113 ntBASIC3.43□□□□□ -1.86
THBS1P07996 AC123900.1-201ENST00000420390 96 ntBASIC3.43□□□□□ -1.86
THBS1P07996 AC009969.1-201ENST00000438726 172 ntBASIC3.43□□□□□ -1.86
THBS1P07996 RNU7-80P-201ENST00000459562 61 ntBASIC3.43□□□□□ -1.86
THBS1P07996 AC106707.2-201ENST00000484182 374 ntBASIC3.43□□□□□ -1.86
THBS1P07996 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.43□□□□□ -1.86
THBS1P07996 SNORA31.1-201ENST00000515993 133 ntBASIC3.43□□□□□ -1.86
THBS1P07996 SNORA31.5-201ENST00000516190 133 ntBASIC3.43□□□□□ -1.86
THBS1P07996 SCARNA14-201ENST00000516903 136 ntBASIC3.43□□□□□ -1.86
THBS1P07996 MIR5047-201ENST00000579212 100 ntBASIC3.43□□□□□ -1.86
THBS1P07996 AC008739.3-201ENST00000603262 127 ntBASIC3.43□□□□□ -1.86
THBS1P07996 AC006441.5-201ENST00000612680 209 ntBASIC3.43□□□□□ -1.86
THBS1P07996 MIR376A2-201ENST00000636782 80 ntBASIC3.43□□□□□ -1.86
THBS1P07996 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
THBS1P07996 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
THBS1P07996 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
THBS1P07996 RNA5SP119-201ENST00000362715 117 ntBASIC3.42□□□□□ -1.86
THBS1P07996 Y_RNA.96-201ENST00000363092 109 ntBASIC3.42□□□□□ -1.86
THBS1P07996 SNORD115-28-201ENST00000363931 81 ntBASIC3.42□□□□□ -1.86
THBS1P07996 SNORA73.2-201ENST00000364946 201 ntBASIC3.42□□□□□ -1.86
THBS1P07996 RNU6-546P-201ENST00000383991 107 ntBASIC3.42□□□□□ -1.86
THBS1P07996 RNU6-242P-201ENST00000384359 107 ntBASIC3.42□□□□□ -1.86
THBS1P07996 RNU6-816P-201ENST00000390914 107 ntBASIC3.42□□□□□ -1.86
THBS1P07996 RNU6-1268P-201ENST00000391214 107 ntBASIC3.42□□□□□ -1.86
THBS1P07996 RNU6-1239P-201ENST00000391310 107 ntBASIC3.42□□□□□ -1.86
THBS1P07996 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.42□□□□□ -1.86
THBS1P07996 AC006989.1-201ENST00000427212 131 ntBASIC3.42□□□□□ -1.86
THBS1P07996 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.42□□□□□ -1.86
THBS1P07996 AC091544.4-201ENST00000555268 342 ntBASIC3.42□□□□□ -1.86
THBS1P07996 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.42□□□□□ -1.86
THBS1P07996 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.42□□□□□ -1.86
THBS1P07996 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.42□□□□□ -1.86
THBS1P07996 XIST_intron.1-201ENST00000619444 68 ntBASIC3.42□□□□□ -1.86
THBS1P07996 MIR6079-201ENST00000635807 62 ntBASIC3.42□□□□□ -1.86
THBS1P07996 AP000553.6-201ENST00000641242 118 ntBASIC3.42□□□□□ -1.86
THBS1P07996 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
THBS1P07996 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
THBS1P07996 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
THBS1P07996 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
THBS1P07996 Y_RNA.17-201ENST00000362433 111 ntBASIC3.41□□□□□ -1.86
THBS1P07996 RNU6-283P-201ENST00000364788 107 ntBASIC3.41□□□□□ -1.86
THBS1P07996 Y_RNA.507-201ENST00000384500 99 ntBASIC3.41□□□□□ -1.86
THBS1P07996 RNU6-813P-201ENST00000384691 107 ntBASIC3.41□□□□□ -1.86
THBS1P07996 U3.44-201ENST00000458938 192 ntBASIC3.41□□□□□ -1.86
THBS1P07996 RNU7-123P-201ENST00000515911 60 ntBASIC3.41□□□□□ -1.86
THBS1P07996 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.41□□□□□ -1.86
THBS1P07996 RNU6-1291P-201ENST00000516591 104 ntBASIC3.41□□□□□ -1.86
THBS1P07996 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.41□□□□□ -1.86
THBS1P07996 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.41□□□□□ -1.86
THBS1P07996 MIR4305-201ENST00000583252 102 ntBASIC3.41□□□□□ -1.86
THBS1P07996 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.41□□□□□ -1.86
THBS1P07996 IGLL4P-201ENST00000614590 133 ntBASIC3.41□□□□□ -1.86
THBS1P07996 MIR1248-201ENST00000629190 106 ntBASIC3.41□□□□□ -1.86
THBS1P07996 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
THBS1P07996 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
THBS1P07996 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
THBS1P07996 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
THBS1P07996 snoU2-30.2-201ENST00000362805 70 ntBASIC3.4□□□□□ -1.87
THBS1P07996 RNY1P10-201ENST00000363268 113 ntBASIC3.4□□□□□ -1.87
THBS1P07996 SNORD14E-201ENST00000364009 85 ntBASIC3.4□□□□□ -1.87
THBS1P07996 RNU6-1124P-201ENST00000384169 107 ntBASIC3.4□□□□□ -1.87
THBS1P07996 U8.11-201ENST00000384699 133 ntBASIC3.4□□□□□ -1.87
THBS1P07996 MIR200C-201ENST00000384980 68 ntBASIC3.4□□□□□ -1.87
THBS1P07996 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
THBS1P07996 Y_RNA.593-201ENST00000410292 98 ntBASIC3.4□□□□□ -1.87
THBS1P07996 ARF4P2-201ENST00000430209 526 ntBASIC3.4□□□□□ -1.87
THBS1P07996 AL445687.1-201ENST00000439946 251 ntBASIC3.4□□□□□ -1.87
THBS1P07996 U8.18-201ENST00000459285 133 ntBASIC3.4□□□□□ -1.87
THBS1P07996 RNU7-94P-201ENST00000459576 63 ntBASIC3.4□□□□□ -1.87
THBS1P07996 AC010401.1-201ENST00000463867 348 ntBASIC3.4□□□□□ -1.87
THBS1P07996 RPL23AP67-201ENST00000465341 474 ntBASIC3.4□□□□□ -1.87
THBS1P07996 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.4□□□□□ -1.87
THBS1P07996 AC093259.1-201ENST00000509755 300 ntBASIC3.4□□□□□ -1.87
THBS1P07996 SCARNA11.3-201ENST00000517276 130 ntBASIC3.4□□□□□ -1.87
THBS1P07996 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.4□□□□□ -1.87
THBS1P07996 AP002004.2-201ENST00000531656 154 ntBASIC3.4□□□□□ -1.87
THBS1P07996 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.4□□□□□ -1.87
THBS1P07996 AC087499.8-201ENST00000578406 226 ntBASIC3.4□□□□□ -1.87
THBS1P07996 MIR5187-201ENST00000583479 76 ntBASIC3.4□□□□□ -1.87
THBS1P07996 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
THBS1P07996 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
THBS1P07996 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
THBS1P07996 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
THBS1P07996 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
THBS1P07996 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
THBS1P07996 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
THBS1P07996 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.39□□□□□ -1.87
THBS1P07996 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
THBS1P07996 Y_RNA.37-201ENST00000362606 108 ntBASIC3.39□□□□□ -1.87
THBS1P07996 RNY1P1-201ENST00000364372 112 ntBASIC3.39□□□□□ -1.87
THBS1P07996 Y_RNA.332-201ENST00000365271 113 ntBASIC3.39□□□□□ -1.87
THBS1P07996 MIR522-201ENST00000385071 87 ntBASIC3.39□□□□□ -1.87
THBS1P07996 MT-TI-201ENST00000387365 69 ntBASIC3.39□□□□□ -1.87
THBS1P07996 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
THBS1P07996 AC096949.1-201ENST00000412047 152 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms