Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.07□□□□□ -2.24
P04436 RN7SKP49-201ENST00000516675 260 ntBASIC1.07□□□□□ -2.24
P04436 AC055872.1-201ENST00000570978 278 ntBASIC1.07□□□□□ -2.24
P04436 AC091178.2-201ENST00000584401 117 ntBASIC1.07□□□□□ -2.24
P04436 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
P04436 U6.115-201ENST00000636045 103 ntBASIC1.07□□□□□ -2.24
P04436 AC099654.5-201ENST00000636479 350 ntBASIC1.07□□□□□ -2.24
P04436 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
P04436 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
P04436 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
P04436 AC073544.1-201ENST00000600110 1595 ntBASIC1.06□□□□□ -2.24
P04436 SNORA27.1-201ENST00000362604 124 ntBASIC1.06□□□□□ -2.24
P04436 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
P04436 RNU6-370P-201ENST00000411008 104 ntBASIC1.06□□□□□ -2.24
P04436 RAB28P5-201ENST00000427490 651 ntBASIC1.06□□□□□ -2.24
P04436 AC074133.1-201ENST00000515696 183 ntBASIC1.06□□□□□ -2.24
P04436 SNORA40.9-201ENST00000515895 93 ntBASIC1.06□□□□□ -2.24
P04436 SNORA20.3-201ENST00000516880 132 ntBASIC1.06□□□□□ -2.24
P04436 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.06□□□□□ -2.24
P04436 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
P04436 Y_RNA.124-201ENST00000363339 93 ntBASIC1.05□□□□□ -2.24
P04436 RNU6-117P-201ENST00000365415 107 ntBASIC1.05□□□□□ -2.24
P04436 RNA5SP259-201ENST00000365541 109 ntBASIC1.05□□□□□ -2.24
P04436 SNORA70.7-201ENST00000384159 133 ntBASIC1.05□□□□□ -2.24
P04436 SNORA75.6-201ENST00000391318 127 ntBASIC1.05□□□□□ -2.24
P04436 RN7SKP200-201ENST00000410564 320 ntBASIC1.05□□□□□ -2.24
P04436 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.05□□□□□ -2.24
P04436 AC138393.2-201ENST00000414742 246 ntBASIC1.05□□□□□ -2.24
P04436 MTCO3P19-201ENST00000415864 321 ntBASIC1.05□□□□□ -2.24
P04436 AC018865.2-201ENST00000423631 129 ntBASIC1.05□□□□□ -2.24
P04436 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.05□□□□□ -2.24
P04436 PGBD4P5-201ENST00000445958 426 ntBASIC1.05□□□□□ -2.24
P04436 RPL31P58-201ENST00000469001 379 ntBASIC1.05□□□□□ -2.24
P04436 AC092991.1-201ENST00000477176 376 ntBASIC1.05□□□□□ -2.24
P04436 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
P04436 RNU6-165P-201ENST00000517170 99 ntBASIC1.05□□□□□ -2.24
P04436 CYCSP23-201ENST00000519781 313 ntBASIC1.05□□□□□ -2.24
P04436 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.05□□□□□ -2.24
P04436 AC005899.2-201ENST00000584353 90 ntBASIC1.05□□□□□ -2.24
P04436 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.05□□□□□ -2.24
P04436 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.05□□□□□ -2.24
P04436 MIR8070-201ENST00000616510 88 ntBASIC1.05□□□□□ -2.24
P04436 PISRT1.1-201ENST00000616930 107 ntBASIC1.05□□□□□ -2.24
P04436 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.05□□□□□ -2.24
P04436 MIR6079-201ENST00000635807 62 ntBASIC1.05□□□□□ -2.24
P04436 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
P04436 Y_RNA.238-201ENST00000364441 102 ntBASIC1.04□□□□□ -2.24
P04436 SNORA25.9-201ENST00000365087 128 ntBASIC1.04□□□□□ -2.24
P04436 Y_RNA.361-201ENST00000365515 120 ntBASIC1.04□□□□□ -2.24
P04436 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.04□□□□□ -2.24
P04436 SNORD12B-201ENST00000410433 91 ntBASIC1.04□□□□□ -2.24
P04436 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.04□□□□□ -2.24
P04436 AC015922.2-201ENST00000435593 184 ntBASIC1.04□□□□□ -2.24
P04436 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.04□□□□□ -2.24
P04436 MTCO3P10-201ENST00000455912 772 ntBASIC1.04□□□□□ -2.24
P04436 Y_RNA.635-201ENST00000459041 101 ntBASIC1.04□□□□□ -2.24
P04436 RPL39P38-201ENST00000467018 153 ntBASIC1.04□□□□□ -2.24
P04436 COX6CP14-201ENST00000469580 174 ntBASIC1.04□□□□□ -2.24
P04436 RNA5SP20-201ENST00000515976 84 ntBASIC1.04□□□□□ -2.24
P04436 RN7SKP88-201ENST00000516847 250 ntBASIC1.04□□□□□ -2.24
P04436 RNU7-172P-201ENST00000517125 64 ntBASIC1.04□□□□□ -2.24
P04436 AC090821.2-201ENST00000523552 176 ntBASIC1.04□□□□□ -2.24
P04436 AL021879.1-201ENST00000611756 288 ntBASIC1.04□□□□□ -2.24
P04436 AL355073.2-201ENST00000612106 557 ntBASIC1.04□□□□□ -2.24
P04436 7SK.8-201ENST00000612110 250 ntBASIC1.04□□□□□ -2.24
P04436 7SK.11-201ENST00000615477 250 ntBASIC1.04□□□□□ -2.24
P04436 7SK.13-201ENST00000622040 250 ntBASIC1.04□□□□□ -2.24
P04436 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.04□□□□□ -2.24
P04436 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.24
P04436 RNU6-961P-201ENST00000363893 105 ntBASIC1.03□□□□□ -2.24
P04436 Y_RNA.243-201ENST00000364481 109 ntBASIC1.03□□□□□ -2.24
P04436 RNU6-890P-201ENST00000384121 107 ntBASIC1.03□□□□□ -2.24
P04436 RNU6-505P-201ENST00000384427 107 ntBASIC1.03□□□□□ -2.24
P04436 Y_RNA.498-201ENST00000384460 102 ntBASIC1.03□□□□□ -2.24
P04436 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.03□□□□□ -2.24
P04436 AL137792.2-201ENST00000443484 235 ntBASIC1.03□□□□□ -2.24
P04436 UBE2V1P7-201ENST00000446395 340 ntBASIC1.03□□□□□ -2.24
P04436 RNU6-625P-201ENST00000459412 107 ntBASIC1.03□□□□□ -2.24
P04436 AC091021.1-201ENST00000468051 388 ntBASIC1.03□□□□□ -2.24
P04436 AL133373.1-201ENST00000497098 94 ntBASIC1.03□□□□□ -2.24
P04436 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.03□□□□□ -2.24
P04436 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.03□□□□□ -2.24
P04436 RN7SKP179-201ENST00000516126 217 ntBASIC1.03□□□□□ -2.24
P04436 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.03□□□□□ -2.24
P04436 AC080078.3-201ENST00000605407 463 ntBASIC1.03□□□□□ -2.24
P04436 AL513423.1-201ENST00000621695 132 ntBASIC1.03□□□□□ -2.24
P04436 MIR3674-201ENST00000636576 68 ntBASIC1.03□□□□□ -2.24
P04436 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.03□□□□□ -2.24
P04436 AC091812.1-201ENST00000432235 1948 ntBASIC1.03□□□□□ -2.25
P04436 RNY3P11-201ENST00000364153 102 ntBASIC1.02□□□□□ -2.25
P04436 Y_RNA.577-201ENST00000384794 101 ntBASIC1.02□□□□□ -2.25
P04436 Y_RNA.592-201ENST00000410274 109 ntBASIC1.02□□□□□ -2.25
P04436 RNU6-1156P-201ENST00000410365 100 ntBASIC1.02□□□□□ -2.25
P04436 RNU5A-5P-201ENST00000411054 116 ntBASIC1.02□□□□□ -2.25
P04436 AL591704.2-201ENST00000421658 181 ntBASIC1.02□□□□□ -2.25
P04436 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.02□□□□□ -2.25
P04436 MRPS18CP6-201ENST00000423587 223 ntBASIC1.02□□□□□ -2.25
P04436 RPL23AP50-201ENST00000434149 455 ntBASIC1.02□□□□□ -2.25
P04436 STAG3L5P-204ENST00000443759 179 ntBASIC1.02□□□□□ -2.25
P04436 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms