Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 FAM106DP-201ENST00000586416 501 ntBASIC1.5□□□□□ -2.17
PDGFBP01127 AC011476.5-201ENST00000615594 130 ntBASIC1.5□□□□□ -2.17
PDGFBP01127 AC008873.1-201ENST00000625051 138 ntBASIC1.5□□□□□ -2.17
PDGFBP01127 MIR338-201ENST00000636369 67 ntBASIC1.5□□□□□ -2.17
PDGFBP01127 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
PDGFBP01127 ICE2P2-201ENST00000483823 2787 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
PDGFBP01127 RNU6-1266P-201ENST00000362794 105 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 snoU2-30.2-201ENST00000362805 70 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 RNU5F-3P-201ENST00000363767 117 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 Y_RNA.287-201ENST00000364853 94 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 RNU6-1240P-201ENST00000365155 104 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 RNU6-318P-201ENST00000384283 103 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 Y_RNA.577-201ENST00000384794 101 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 MIR628-201ENST00000385229 95 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 MIR1185-2-201ENST00000408687 86 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 SNORD12B-201ENST00000410433 91 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.49□□□□□ -2.17
PDGFBP01127 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.49□□□□□ -2.17
PDGFBP01127 AC073910.1-201ENST00000445047 438 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 UBE2V1P7-201ENST00000446395 340 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 PCNPP5-201ENST00000452246 481 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 SNORD19B-201ENST00000459623 84 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 MTND3P22-201ENST00000510932 243 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 RNU6-408P-201ENST00000515910 100 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 RNA5SP436-201ENST00000516020 115 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.49□□□□□ -2.17
PDGFBP01127 AC023157.2-201ENST00000540596 141 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.49□□□□□ -2.17
PDGFBP01127 AL133255.1-201ENST00000606374 441 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 AC104985.2-201ENST00000620598 500 ntBASIC1.49□□□□□ -2.17
PDGFBP01127 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
PDGFBP01127 Y_RNA.146-201ENST00000363549 102 ntBASIC1.48□□□□□ -2.17
PDGFBP01127 Y_RNA.813-201ENST00000364639 102 ntBASIC1.48□□□□□ -2.17
PDGFBP01127 MIR559-201ENST00000385188 96 ntBASIC1.48□□□□□ -2.17
PDGFBP01127 Y_RNA.579-201ENST00000390939 94 ntBASIC1.48□□□□□ -2.17
PDGFBP01127 AL117342.1-201ENST00000404861 406 ntBASIC1.48□□□□□ -2.17
PDGFBP01127 Y_RNA.592-201ENST00000410274 109 ntBASIC1.48□□□□□ -2.17
PDGFBP01127 AC236972.2-201ENST00000434979 310 ntBASIC1.48□□□□□ -2.17
PDGFBP01127 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
PDGFBP01127 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.48□□□□□ -2.17
PDGFBP01127 RNU6-625P-201ENST00000459412 107 ntBASIC1.48□□□□□ -2.17
PDGFBP01127 RPS26P55-201ENST00000471178 356 ntBASIC1.48□□□□□ -2.17
PDGFBP01127 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.48□□□□□ -2.17
PDGFBP01127 RNU6-1223P-201ENST00000517124 104 ntBASIC1.48□□□□□ -2.17
PDGFBP01127 RNU6-902P-201ENST00000517212 91 ntBASIC1.48□□□□□ -2.17
PDGFBP01127 RNA5SP437-201ENST00000517249 129 ntBASIC1.48□□□□□ -2.17
PDGFBP01127 MIR8063-201ENST00000621930 81 ntBASIC1.48□□□□□ -2.17
PDGFBP01127 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.48□□□□□ -2.17
PDGFBP01127 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
PDGFBP01127 AC100821.1-201ENST00000523153 2479 ntBASIC1.47□□□□□ -2.17
PDGFBP01127 RNU6-1301P-201ENST00000362724 104 ntBASIC1.47□□□□□ -2.17
PDGFBP01127 Y_RNA.80-201ENST00000362996 102 ntBASIC1.47□□□□□ -2.17
PDGFBP01127 RNU6-1145P-201ENST00000384246 107 ntBASIC1.47□□□□□ -2.17
PDGFBP01127 Y_RNA.485-201ENST00000384395 102 ntBASIC1.47□□□□□ -2.17
PDGFBP01127 RNU6-997P-201ENST00000384725 107 ntBASIC1.47□□□□□ -2.17
PDGFBP01127 RNA5SP109-201ENST00000391010 116 ntBASIC1.47□□□□□ -2.17
PDGFBP01127 AC008134.1-201ENST00000420943 193 ntBASIC1.47□□□□□ -2.17
PDGFBP01127 MTND4P28-201ENST00000426217 387 ntBASIC1.47□□□□□ -2.17
PDGFBP01127 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.47□□□□□ -2.17
PDGFBP01127 ELOCP24-201ENST00000456370 334 ntBASIC1.47□□□□□ -2.17
PDGFBP01127 RNU6-221P-201ENST00000459541 99 ntBASIC1.47□□□□□ -2.17
PDGFBP01127 COX6CP14-201ENST00000469580 174 ntBASIC1.47□□□□□ -2.17
PDGFBP01127 RPS27P22-201ENST00000478056 241 ntBASIC1.47□□□□□ -2.17
PDGFBP01127 SNORA40.9-201ENST00000515895 93 ntBASIC1.47□□□□□ -2.17
PDGFBP01127 AC144568.1-201ENST00000520139 137 ntBASIC1.47□□□□□ -2.17
PDGFBP01127 RAB11AP2-201ENST00000545905 639 ntBASIC1.47□□□□□ -2.17
PDGFBP01127 AC018448.1-201ENST00000552843 316 ntBASIC1.47□□□□□ -2.17
PDGFBP01127 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
PDGFBP01127 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
PDGFBP01127 MTND5P10-201ENST00000603719 1809 ntBASIC1.47□□□□□ -2.17
PDGFBP01127 RNU6-490P-201ENST00000362985 107 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 RNU6-271P-201ENST00000363858 105 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 Y_RNA.187-201ENST00000363918 113 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 RNU5E-4P-201ENST00000364931 120 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 RNU6-867P-201ENST00000364956 107 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 RNU6-407P-201ENST00000365280 104 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 SNORA4.2-201ENST00000365313 147 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 RNU6-1040P-201ENST00000383974 107 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 MIR1304-201ENST00000408243 91 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 MIR548J-201ENST00000408833 112 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 RNA5SP475-201ENST00000410568 110 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 ELOCP21-201ENST00000412558 336 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 RNU1-98P-201ENST00000458992 160 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 snoU13.27-201ENST00000459278 104 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 AC010469.2-201ENST00000496412 480 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 AL163195.1-201ENST00000496941 348 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 FGF7P4-201ENST00000509595 295 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 RNU7-4P-201ENST00000516961 62 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 SNORD116.3-201ENST00000517176 78 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 AL121890.5-201ENST00000620848 304 ntBASIC1.46□□□□□ -2.18
PDGFBP01127 Y_RNA.428-201ENST00000384078 102 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 Y_RNA.463-201ENST00000384271 102 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 RNU6-136P-201ENST00000384663 107 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
PDGFBP01127 COX6CP10-201ENST00000416832 224 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 AC010154.1-201ENST00000425857 269 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms