Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 Y_RNA.460-201ENST00000384255 102 ntBASIC1.5□□□□□ -2.17
SNX3O60493 MRPL42P3-201ENST00000401492 326 ntBASIC1.5□□□□□ -2.17
SNX3O60493 RNU6-1199P-201ENST00000411249 104 ntBASIC1.5□□□□□ -2.17
SNX3O60493 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.5□□□□□ -2.17
SNX3O60493 AL161935.2-201ENST00000414627 60 ntBASIC1.5□□□□□ -2.17
SNX3O60493 MCFD2P1-201ENST00000417812 300 ntBASIC1.5□□□□□ -2.17
SNX3O60493 MTND4P19-201ENST00000446659 478 ntBASIC1.5□□□□□ -2.17
SNX3O60493 SUMO1P2-201ENST00000452524 304 ntBASIC1.5□□□□□ -2.17
SNX3O60493 snoU13.9-201ENST00000458927 103 ntBASIC1.5□□□□□ -2.17
SNX3O60493 RPS26P55-201ENST00000471178 356 ntBASIC1.5□□□□□ -2.17
SNX3O60493 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.5□□□□□ -2.17
SNX3O60493 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.5□□□□□ -2.17
SNX3O60493 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.5□□□□□ -2.17
SNX3O60493 RPS29P30-201ENST00000600975 111 ntBASIC1.5□□□□□ -2.17
SNX3O60493 AC006380.1-201ENST00000603598 186 ntBASIC1.5□□□□□ -2.17
SNX3O60493 AC010205.1-201ENST00000616668 449 ntBASIC1.5□□□□□ -2.17
SNX3O60493 AC084768.2-201ENST00000622736 221 ntBASIC1.5□□□□□ -2.17
SNX3O60493 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.5□□□□□ -2.17
SNX3O60493 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SNX3O60493 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SNX3O60493 RNU6-797P-201ENST00000363101 109 ntBASIC1.49□□□□□ -2.17
SNX3O60493 U8.2-201ENST00000363156 134 ntBASIC1.49□□□□□ -2.17
SNX3O60493 RNU6-338P-201ENST00000383888 105 ntBASIC1.49□□□□□ -2.17
SNX3O60493 Y_RNA.446-201ENST00000384178 104 ntBASIC1.49□□□□□ -2.17
SNX3O60493 RNU6-474P-201ENST00000384243 107 ntBASIC1.49□□□□□ -2.17
SNX3O60493 MIR194-1-201ENST00000384892 85 ntBASIC1.49□□□□□ -2.17
SNX3O60493 RNU6-440P-201ENST00000390882 105 ntBASIC1.49□□□□□ -2.17
SNX3O60493 MIR1304-201ENST00000408243 91 ntBASIC1.49□□□□□ -2.17
SNX3O60493 RN7SKP51-201ENST00000410781 304 ntBASIC1.49□□□□□ -2.17
SNX3O60493 PMCHL1-202ENST00000423102 261 ntBASIC1.49□□□□□ -2.17
SNX3O60493 RNU7-94P-201ENST00000459576 63 ntBASIC1.49□□□□□ -2.17
SNX3O60493 AC099513.1-201ENST00000490423 301 ntBASIC1.49□□□□□ -2.17
SNX3O60493 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.49□□□□□ -2.17
SNX3O60493 RN7SKP295-201ENST00000517264 153 ntBASIC1.49□□□□□ -2.17
SNX3O60493 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SNX3O60493 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.49□□□□□ -2.17
SNX3O60493 MIR6079-201ENST00000635807 62 ntBASIC1.49□□□□□ -2.17
SNX3O60493 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SNX3O60493 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.49□□□□□ -2.17
SNX3O60493 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SNX3O60493 SNORD114-7-201ENST00000362520 77 ntBASIC1.48□□□□□ -2.17
SNX3O60493 Y_RNA.230-201ENST00000364348 109 ntBASIC1.48□□□□□ -2.17
SNX3O60493 RNU6-117P-201ENST00000365415 107 ntBASIC1.48□□□□□ -2.17
SNX3O60493 RNU6-376P-201ENST00000384731 106 ntBASIC1.48□□□□□ -2.17
SNX3O60493 MIR934-201ENST00000401241 83 ntBASIC1.48□□□□□ -2.17
SNX3O60493 AL031003.1-201ENST00000404229 172 ntBASIC1.48□□□□□ -2.17
SNX3O60493 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.48□□□□□ -2.17
SNX3O60493 AC091021.1-201ENST00000468051 388 ntBASIC1.48□□□□□ -2.17
SNX3O60493 RNU6-155P-201ENST00000516347 100 ntBASIC1.48□□□□□ -2.17
SNX3O60493 RNU6-63P-201ENST00000516690 95 ntBASIC1.48□□□□□ -2.17
SNX3O60493 AC040926.1-201ENST00000530195 238 ntBASIC1.48□□□□□ -2.17
SNX3O60493 RPL21P9-201ENST00000556149 474 ntBASIC1.48□□□□□ -2.17
SNX3O60493 MIR4255-201ENST00000579351 72 ntBASIC1.48□□□□□ -2.17
SNX3O60493 AL390123.1-201ENST00000603216 237 ntBASIC1.48□□□□□ -2.17
SNX3O60493 AL121655.1-201ENST00000605811 308 ntBASIC1.48□□□□□ -2.17
SNX3O60493 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.48□□□□□ -2.17
SNX3O60493 AC021506.2-201ENST00000612354 169 ntBASIC1.48□□□□□ -2.17
SNX3O60493 AC127459.3-201ENST00000624328 466 ntBASIC1.48□□□□□ -2.17
SNX3O60493 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.48□□□□□ -2.17
SNX3O60493 AC005592.1-201ENST00000566527 1640 ntBASIC1.48□□□□□ -2.17
SNX3O60493 RNU6-1175P-201ENST00000365200 107 ntBASIC1.47□□□□□ -2.17
SNX3O60493 RNU6-950P-201ENST00000384651 107 ntBASIC1.47□□□□□ -2.17
SNX3O60493 RNU6-136P-201ENST00000384663 107 ntBASIC1.47□□□□□ -2.17
SNX3O60493 Y_RNA.570-201ENST00000384750 101 ntBASIC1.47□□□□□ -2.17
SNX3O60493 RNU6-1031P-201ENST00000384773 107 ntBASIC1.47□□□□□ -2.17
SNX3O60493 SNORA12.1-201ENST00000390873 148 ntBASIC1.47□□□□□ -2.17
SNX3O60493 MIR1302-11-201ENST00000408051 138 ntBASIC1.47□□□□□ -2.17
SNX3O60493 MIR1302-9-201ENST00000408365 138 ntBASIC1.47□□□□□ -2.17
SNX3O60493 MIR1302-10-201ENST00000408734 138 ntBASIC1.47□□□□□ -2.17
SNX3O60493 RN7SKP200-201ENST00000410564 320 ntBASIC1.47□□□□□ -2.17
SNX3O60493 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.47□□□□□ -2.17
SNX3O60493 HSPE1P24-201ENST00000450782 238 ntBASIC1.47□□□□□ -2.17
SNX3O60493 RPS29P21-201ENST00000496272 170 ntBASIC1.47□□□□□ -2.17
SNX3O60493 RNU6-475P-201ENST00000516073 104 ntBASIC1.47□□□□□ -2.17
SNX3O60493 RNU6-1278P-201ENST00000516130 107 ntBASIC1.47□□□□□ -2.17
SNX3O60493 RNU6-250P-201ENST00000516958 103 ntBASIC1.47□□□□□ -2.17
SNX3O60493 AC091178.2-201ENST00000584401 117 ntBASIC1.47□□□□□ -2.17
SNX3O60493 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.47□□□□□ -2.17
SNX3O60493 AC022441.3-201ENST00000605737 136 ntBASIC1.47□□□□□ -2.17
SNX3O60493 Y_RNA.772-201ENST00000606692 102 ntBASIC1.47□□□□□ -2.17
SNX3O60493 MIR1302-2-201ENST00000607096 138 ntBASIC1.47□□□□□ -2.17
SNX3O60493 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SNX3O60493 ICE2P2-201ENST00000483823 2787 ntBASIC1.47□□□□□ -2.17
SNX3O60493 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SNX3O60493 MIR126-201ENST00000362291 85 ntBASIC1.46□□□□□ -2.18
SNX3O60493 Y_RNA.138-201ENST00000363462 102 ntBASIC1.46□□□□□ -2.18
SNX3O60493 RNU6-324P-201ENST00000363957 106 ntBASIC1.46□□□□□ -2.18
SNX3O60493 SNORD14.1-201ENST00000365609 90 ntBASIC1.46□□□□□ -2.18
SNX3O60493 SNORA70B-201ENST00000384210 135 ntBASIC1.46□□□□□ -2.18
SNX3O60493 RNU6-505P-201ENST00000384427 107 ntBASIC1.46□□□□□ -2.18
SNX3O60493 AC004965.1-201ENST00000413033 213 ntBASIC1.46□□□□□ -2.18
SNX3O60493 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.46□□□□□ -2.18
SNX3O60493 RPS29P23-201ENST00000458635 123 ntBASIC1.46□□□□□ -2.18
SNX3O60493 AC093852.1-201ENST00000503587 266 ntBASIC1.46□□□□□ -2.18
SNX3O60493 RNU6-436P-201ENST00000516171 114 ntBASIC1.46□□□□□ -2.18
SNX3O60493 MIR4423-201ENST00000580922 80 ntBASIC1.46□□□□□ -2.18
SNX3O60493 MIR4285-201ENST00000581001 85 ntBASIC1.46□□□□□ -2.18
SNX3O60493 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.46□□□□□ -2.18
SNX3O60493 AL021879.1-201ENST00000611756 288 ntBASIC1.46□□□□□ -2.18
SNX3O60493 MIR8063-201ENST00000621930 81 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms