Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.37□□□□□ -1.87
GRIN3BO60391 RNU7-197P-201ENST00000458836 62 ntBASIC3.37□□□□□ -1.87
GRIN3BO60391 RNA5SP217-201ENST00000515959 91 ntBASIC3.37□□□□□ -1.87
GRIN3BO60391 SCARNA3-201ENST00000517097 143 ntBASIC3.37□□□□□ -1.87
GRIN3BO60391 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.37□□□□□ -1.87
GRIN3BO60391 AC006254.2-201ENST00000603259 279 ntBASIC3.37□□□□□ -1.87
GRIN3BO60391 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.37□□□□□ -1.87
GRIN3BO60391 TUG1_4.1-201ENST00000619464 181 ntBASIC3.37□□□□□ -1.87
GRIN3BO60391 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.37□□□□□ -1.87
GRIN3BO60391 AC068700.1-201ENST00000565862 3754 ntBASIC3.37□□□□□ -1.87
GRIN3BO60391 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
GRIN3BO60391 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
GRIN3BO60391 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
GRIN3BO60391 SNORA68.1-201ENST00000364537 132 ntBASIC3.36□□□□□ -1.87
GRIN3BO60391 U8.7-201ENST00000364940 136 ntBASIC3.36□□□□□ -1.87
GRIN3BO60391 RNU6-975P-201ENST00000384296 105 ntBASIC3.36□□□□□ -1.87
GRIN3BO60391 RNU6-239P-201ENST00000390990 99 ntBASIC3.36□□□□□ -1.87
GRIN3BO60391 RNU6-381P-201ENST00000391259 108 ntBASIC3.36□□□□□ -1.87
GRIN3BO60391 RNA5SP89-201ENST00000410300 108 ntBASIC3.36□□□□□ -1.87
GRIN3BO60391 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.36□□□□□ -1.87
GRIN3BO60391 RNU7-57P-201ENST00000459540 60 ntBASIC3.36□□□□□ -1.87
GRIN3BO60391 RNU6-221P-201ENST00000459541 99 ntBASIC3.36□□□□□ -1.87
GRIN3BO60391 MIR449C-201ENST00000516047 92 ntBASIC3.36□□□□□ -1.87
GRIN3BO60391 RN7SKP164-201ENST00000516138 266 ntBASIC3.36□□□□□ -1.87
GRIN3BO60391 Y_RNA.709-201ENST00000516952 92 ntBASIC3.36□□□□□ -1.87
GRIN3BO60391 AC068657.1-201ENST00000520807 306 ntBASIC3.36□□□□□ -1.87
GRIN3BO60391 MIR5688-201ENST00000580619 83 ntBASIC3.36□□□□□ -1.87
GRIN3BO60391 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.36□□□□□ -1.87
GRIN3BO60391 snoZ196.1-201ENST00000625269 89 ntBASIC3.36□□□□□ -1.87
GRIN3BO60391 MIR7153-201ENST00000637758 57 ntBASIC3.36□□□□□ -1.87
GRIN3BO60391 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
GRIN3BO60391 Y_RNA.118-201ENST00000363300 101 ntBASIC3.35□□□□□ -1.87
GRIN3BO60391 Y_RNA.420-201ENST00000384043 110 ntBASIC3.35□□□□□ -1.87
GRIN3BO60391 MIR873-201ENST00000401120 77 ntBASIC3.35□□□□□ -1.87
GRIN3BO60391 HSPE1P13-201ENST00000451143 297 ntBASIC3.35□□□□□ -1.87
GRIN3BO60391 RNU7-107P-201ENST00000459121 61 ntBASIC3.35□□□□□ -1.87
GRIN3BO60391 AC080013.2-201ENST00000460866 323 ntBASIC3.35□□□□□ -1.87
GRIN3BO60391 ATP5EP1-201ENST00000510257 156 ntBASIC3.35□□□□□ -1.87
GRIN3BO60391 RNU6-589P-201ENST00000516485 107 ntBASIC3.35□□□□□ -1.87
GRIN3BO60391 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
GRIN3BO60391 AC105245.1-201ENST00000581934 244 ntBASIC3.35□□□□□ -1.87
GRIN3BO60391 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
GRIN3BO60391 MIR7515-201ENST00000637837 67 ntBASIC3.35□□□□□ -1.87
GRIN3BO60391 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
GRIN3BO60391 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.35□□□□□ -1.87
GRIN3BO60391 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.35□□□□□ -1.87
GRIN3BO60391 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
GRIN3BO60391 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.35□□□□□ -1.87
GRIN3BO60391 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
GRIN3BO60391 MAPK10-266ENST00000641066 6555 ntBASIC3.35□□□□□ -1.87
GRIN3BO60391 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
GRIN3BO60391 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
GRIN3BO60391 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
GRIN3BO60391 RNY1P11-201ENST00000363759 113 ntBASIC3.34□□□□□ -1.87
GRIN3BO60391 Y_RNA.182-201ENST00000363880 111 ntBASIC3.34□□□□□ -1.87
GRIN3BO60391 SNORA8.3-201ENST00000384679 139 ntBASIC3.34□□□□□ -1.87
GRIN3BO60391 MIR626-201ENST00000385032 94 ntBASIC3.34□□□□□ -1.87
GRIN3BO60391 RNU6-1064P-201ENST00000410626 104 ntBASIC3.34□□□□□ -1.87
GRIN3BO60391 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.34□□□□□ -1.87
GRIN3BO60391 RPL23AP7-203ENST00000449021 469 ntBASIC3.34□□□□□ -1.87
GRIN3BO60391 HMGN2P23-201ENST00000456759 269 ntBASIC3.34□□□□□ -1.87
GRIN3BO60391 RPS29P12-201ENST00000460178 152 ntBASIC3.34□□□□□ -1.87
GRIN3BO60391 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.34□□□□□ -1.87
GRIN3BO60391 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.34□□□□□ -1.88
GRIN3BO60391 AC134026.1-201ENST00000623249 2239 ntBASIC3.34□□□□□ -1.88
GRIN3BO60391 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
GRIN3BO60391 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
GRIN3BO60391 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GRIN3BO60391 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
GRIN3BO60391 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
GRIN3BO60391 RNU6-103P-201ENST00000363686 107 ntBASIC3.33□□□□□ -1.88
GRIN3BO60391 RNU6-271P-201ENST00000363858 105 ntBASIC3.33□□□□□ -1.88
GRIN3BO60391 RNU6-275P-201ENST00000364910 107 ntBASIC3.33□□□□□ -1.88
GRIN3BO60391 Y_RNA.309-201ENST00000365046 111 ntBASIC3.33□□□□□ -1.88
GRIN3BO60391 Y_RNA.466-201ENST00000384294 113 ntBASIC3.33□□□□□ -1.88
GRIN3BO60391 Y_RNA.508-201ENST00000384502 114 ntBASIC3.33□□□□□ -1.88
GRIN3BO60391 RNU6-476P-201ENST00000384726 107 ntBASIC3.33□□□□□ -1.88
GRIN3BO60391 MIR526A2-201ENST00000390198 65 ntBASIC3.33□□□□□ -1.88
GRIN3BO60391 AL355796.1-201ENST00000406706 323 ntBASIC3.33□□□□□ -1.88
GRIN3BO60391 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.33□□□□□ -1.88
GRIN3BO60391 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.33□□□□□ -1.88
GRIN3BO60391 RPL30P13-201ENST00000418873 348 ntBASIC3.33□□□□□ -1.88
GRIN3BO60391 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.33□□□□□ -1.88
GRIN3BO60391 RPS20P10-201ENST00000451209 253 ntBASIC3.33□□□□□ -1.88
GRIN3BO60391 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.33□□□□□ -1.88
GRIN3BO60391 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.33□□□□□ -1.88
GRIN3BO60391 AC021269.2-201ENST00000532318 330 ntBASIC3.33□□□□□ -1.88
GRIN3BO60391 MIR1273D-201ENST00000577266 86 ntBASIC3.33□□□□□ -1.88
GRIN3BO60391 MIR5582-201ENST00000579697 68 ntBASIC3.33□□□□□ -1.88
GRIN3BO60391 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.33□□□□□ -1.88
GRIN3BO60391 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
GRIN3BO60391 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
GRIN3BO60391 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GRIN3BO60391 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
GRIN3BO60391 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.32□□□□□ -1.88
GRIN3BO60391 Y_RNA.357-201ENST00000365487 109 ntBASIC3.32□□□□□ -1.88
GRIN3BO60391 RNU6-144P-201ENST00000383951 107 ntBASIC3.32□□□□□ -1.88
GRIN3BO60391 SNORA20B-201ENST00000384220 132 ntBASIC3.32□□□□□ -1.88
GRIN3BO60391 RNU6-1144P-201ENST00000384247 104 ntBASIC3.32□□□□□ -1.88
GRIN3BO60391 MIR95-201ENST00000385072 81 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms