Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 RNU1-143P-201ENST00000516296 146 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 Y_RNA.677-201ENST00000516401 85 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 RNA5SP468-201ENST00000516782 93 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 RNA5SP380-201ENST00000517190 98 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 RNU6-537P-201ENST00000517277 103 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.03□□□□□ -1.92
RFXAPO00287 U1.23-201ENST00000610293 146 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 RNU1-68P-201ENST00000615382 146 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 XIST_intron.1-201ENST00000619444 68 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 U1.39-201ENST00000621562 146 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
RFXAPO00287 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
RFXAPO00287 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.03□□□□□ -1.92
RFXAPO00287 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.03□□□□□ -1.92
RFXAPO00287 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.03□□□□□ -1.93
RFXAPO00287 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RFXAPO00287 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RFXAPO00287 MIR148B-201ENST00000362252 99 ntBASIC3.02□□□□□ -1.93
RFXAPO00287 RNU6-50P-201ENST00000362356 103 ntBASIC3.02□□□□□ -1.93
RFXAPO00287 RNA5SP383-201ENST00000362934 120 ntBASIC3.02□□□□□ -1.93
RFXAPO00287 SNORD73B-201ENST00000364394 72 ntBASIC3.02□□□□□ -1.93
RFXAPO00287 SNORA9.2-201ENST00000365361 133 ntBASIC3.02□□□□□ -1.93
RFXAPO00287 Y_RNA.369-201ENST00000365568 117 ntBASIC3.02□□□□□ -1.93
RFXAPO00287 Y_RNA.432-201ENST00000384087 111 ntBASIC3.02□□□□□ -1.93
RFXAPO00287 RNU6-748P-201ENST00000384648 107 ntBASIC3.02□□□□□ -1.93
RFXAPO00287 SNORA79-201ENST00000408376 140 ntBASIC3.02□□□□□ -1.93
RFXAPO00287 RNU6-554P-201ENST00000410466 106 ntBASIC3.02□□□□□ -1.93
RFXAPO00287 AC009969.1-201ENST00000438726 172 ntBASIC3.02□□□□□ -1.93
RFXAPO00287 AL031737.1-201ENST00000450125 223 ntBASIC3.02□□□□□ -1.93
RFXAPO00287 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.02□□□□□ -1.93
RFXAPO00287 Y_RNA.649-201ENST00000459077 103 ntBASIC3.02□□□□□ -1.93
RFXAPO00287 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.02□□□□□ -1.93
RFXAPO00287 RNU6-1098P-201ENST00000516772 96 ntBASIC3.02□□□□□ -1.93
RFXAPO00287 AC091178.2-201ENST00000584401 117 ntBASIC3.02□□□□□ -1.93
RFXAPO00287 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.02□□□□□ -1.93
RFXAPO00287 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
RFXAPO00287 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
RFXAPO00287 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.02□□□□□ -1.93
RFXAPO00287 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
RFXAPO00287 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RFXAPO00287 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RFXAPO00287 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.01□□□□□ -1.93
RFXAPO00287 SNORA27.1-201ENST00000362604 124 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 RNU6-640P-201ENST00000363693 105 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 SNORD114-30-201ENST00000364448 72 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 SNORA51.4-201ENST00000364993 124 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 RNU6-1323P-201ENST00000384025 107 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 RNU6-106P-201ENST00000384405 107 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 RNU6-905P-201ENST00000384434 107 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 RNU6-880P-201ENST00000384526 107 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 U6atac.2-201ENST00000408644 118 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 AC112771.1-201ENST00000463581 102 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 RPS26P55-201ENST00000471178 356 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 SRIP1-201ENST00000489235 288 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 RPS29P21-201ENST00000496272 170 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 AC005921.1-201ENST00000510589 286 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 SNORA64.4-201ENST00000516632 81 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 AC107016.2-201ENST00000547968 190 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 AC131055.1-201ENST00000584626 316 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 AL929325.1-201ENST00000603096 117 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.01□□□□□ -1.93
RFXAPO00287 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
RFXAPO00287 AC103988.1-201ENST00000566382 2177 ntBASIC3.01□□□□□ -1.93
RFXAPO00287 AC007256.1-201ENST00000392253 2765 ntBASIC3□□□□□ -1.93
RFXAPO00287 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3□□□□□ -1.93
RFXAPO00287 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3□□□□□ -1.93
RFXAPO00287 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3□□□□□ -1.93
RFXAPO00287 ZNF658B-202ENST00000615961 3375 ntBASIC3□□□□□ -1.93
RFXAPO00287 AC069528.2-201ENST00000624849 1991 ntBASIC3□□□□□ -1.93
RFXAPO00287 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
RFXAPO00287 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
RFXAPO00287 RNU6-655P-201ENST00000362858 107 ntBASIC3□□□□□ -1.93
RFXAPO00287 SNORD114-19-201ENST00000363072 75 ntBASIC3□□□□□ -1.93
RFXAPO00287 RNU6-1210P-201ENST00000363775 107 ntBASIC3□□□□□ -1.93
RFXAPO00287 SNORA1.3-201ENST00000384676 136 ntBASIC3□□□□□ -1.93
RFXAPO00287 MIR586-201ENST00000385035 97 ntBASIC3□□□□□ -1.93
RFXAPO00287 MIR764-201ENST00000390811 85 ntBASIC3□□□□□ -1.93
RFXAPO00287 RPS12P18-201ENST00000442381 270 ntBASIC3□□□□□ -1.93
RFXAPO00287 AC080013.2-201ENST00000460866 323 ntBASIC3□□□□□ -1.93
RFXAPO00287 RPS29P24-201ENST00000486345 171 ntBASIC3□□□□□ -1.93
RFXAPO00287 RN7SKP19-201ENST00000516016 252 ntBASIC3□□□□□ -1.93
RFXAPO00287 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RFXAPO00287 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RFXAPO00287 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
RFXAPO00287 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
RFXAPO00287 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.99□□□□□ -1.93
RFXAPO00287 Y_RNA.52-201ENST00000362760 96 ntBASIC2.99□□□□□ -1.93
RFXAPO00287 SNORD56.3-201ENST00000363507 71 ntBASIC2.99□□□□□ -1.93
RFXAPO00287 AL603914.1-201ENST00000401964 204 ntBASIC2.99□□□□□ -1.93
RFXAPO00287 AC016717.1-201ENST00000448918 286 ntBASIC2.99□□□□□ -1.93
RFXAPO00287 HMGN1P18-201ENST00000457642 277 ntBASIC2.99□□□□□ -1.93
RFXAPO00287 SNORD65B-201ENST00000459126 73 ntBASIC2.99□□□□□ -1.93
RFXAPO00287 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.99□□□□□ -1.93
RFXAPO00287 AC025166.1-201ENST00000612411 163 ntBASIC2.99□□□□□ -1.93
RFXAPO00287 AC010889.1-201ENST00000566193 2666 ntBASIC2.99□□□□□ -1.93
RFXAPO00287 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RFXAPO00287 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
RFXAPO00287 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RFXAPO00287 MTND5P18-201ENST00000445624 1801 ntBASIC2.98□□□□□ -1.93
RFXAPO00287 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms