Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNU6-529P-201ENST00000363383 104 ntBASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 Y_RNA.348-201ENST00000365403 103 ntBASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 Y_RNA.432-201ENST00000384087 111 ntBASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNU6-136P-201ENST00000384663 107 ntBASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AL031121.1-201ENST00000406553 254 ntBASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 MIR1263-201ENST00000408324 86 ntBASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNA5SP38-201ENST00000410750 119 ntBASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNA5SP184-201ENST00000411071 108 ntBASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNA5SP310-201ENST00000459084 116 ntBASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNU6-1337P-201ENST00000516525 95 ntBASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 MIR4319-201ENST00000577285 85 ntBASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AC091178.2-201ENST00000584401 117 ntBASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 POLR3GP1-201ENST00000594073 261 ntBASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RPL12P50-201ENST00000603116 116 ntBASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AP003122.5-201ENST00000527668 3766 ntBASIC2.82□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.82□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 Y_RNA.40-201ENST00000362645 93 ntBASIC2.82□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 SNORD72-201ENST00000390994 80 ntBASIC2.82□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AL603914.1-201ENST00000401964 204 ntBASIC2.82□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AC063976.3-201ENST00000426849 329 ntBASIC2.82□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.82□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.82□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.82□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RN7SKP132-201ENST00000516001 208 ntBASIC2.82□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 HSPE1P18-201ENST00000517602 280 ntBASIC2.82□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 EIF4A1P12-201ENST00000551910 141 ntBASIC2.82□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 PRELID2P1-201ENST00000552837 301 ntBASIC2.82□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.82□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 MIR4513-201ENST00000581077 86 ntBASIC2.82□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.82□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AL138880.2-201ENST00000616214 239 ntBASIC2.82□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AC093831.2-201ENST00000624393 3427 ntBASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 U3.8-201ENST00000363675 217 ntBASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNU6-1305P-201ENST00000364353 104 ntBASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNU6-1107P-201ENST00000364817 104 ntBASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNU6-487P-201ENST00000365430 104 ntBASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 Y_RNA.361-201ENST00000365515 120 ntBASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNU6-756P-201ENST00000383997 107 ntBASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 SNORA51.10-201ENST00000384418 136 ntBASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 SNORA1.3-201ENST00000384676 136 ntBASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AL138827.1-201ENST00000402666 306 ntBASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNA5SP201-201ENST00000410316 124 ntBASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNU6-437P-201ENST00000459408 95 ntBASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AC080013.2-201ENST00000460866 323 ntBASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RPL30P14-201ENST00000482744 348 ntBASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 SRIP1-201ENST00000489235 288 ntBASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AC145146.1-201ENST00000496370 254 ntBASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNU6-1299P-201ENST00000516316 100 ntBASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AC091564.4-201ENST00000533934 2194 ntBASIC2.81□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AC062016.1-201ENST00000355719 319 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 MIR26A1-201ENST00000362205 77 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNU4-15P-201ENST00000362613 141 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNA5SP173-201ENST00000364857 136 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNU6-484P-201ENST00000384016 107 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 Y_RNA.558-201ENST00000384685 113 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 MIR9-1-201ENST00000385198 89 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNA5SP21-201ENST00000410917 96 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AL161651.1-201ENST00000440882 223 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 SNORD109B-201ENST00000458961 67 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 SNORD109A-201ENST00000459128 67 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RN7SL75P-201ENST00000461926 281 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNA5SP385-201ENST00000515947 110 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNU6-412P-201ENST00000516434 106 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNU6-56P-201ENST00000516986 93 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 SNORA31.21-201ENST00000517180 77 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AC027419.1-201ENST00000522976 328 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 MIR3162-201ENST00000581818 82 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AP003357.1-201ENST00000604497 148 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AL022345.2-201ENST00000606307 135 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AC090115.4-201ENST00000609970 188 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 MIR3199-2-201ENST00000636243 86 ntBASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNU6-859P-201ENST00000362728 107 ntBASIC2.79□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 Y_RNA.91-201ENST00000363042 107 ntBASIC2.79□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 SNORA67.2-201ENST00000384300 149 ntBASIC2.79□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RNU2-70P-201ENST00000410718 179 ntBASIC2.79□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.79□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AC009969.1-201ENST00000438726 172 ntBASIC2.79□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 RPS29P12-201ENST00000460178 152 ntBASIC2.79□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AC107626.1-201ENST00000471084 183 ntBASIC2.79□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AP003327.1-201ENST00000529684 127 ntBASIC2.79□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms