Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 RNA5SP212-201ENST00000391223 107 ntBASIC1.68□□□□□ -2.14
SHISA7A6NL88 MRPL35P1-201ENST00000404272 572 ntBASIC1.68□□□□□ -2.14
SHISA7A6NL88 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.68□□□□□ -2.14
SHISA7A6NL88 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.68□□□□□ -2.14
SHISA7A6NL88 RNU7-57P-201ENST00000459540 60 ntBASIC1.68□□□□□ -2.14
SHISA7A6NL88 RNA5SP220-201ENST00000516298 104 ntBASIC1.68□□□□□ -2.14
SHISA7A6NL88 RNU6-764P-201ENST00000516396 105 ntBASIC1.68□□□□□ -2.14
SHISA7A6NL88 Y_RNA.715-201ENST00000517082 110 ntBASIC1.68□□□□□ -2.14
SHISA7A6NL88 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.68□□□□□ -2.14
SHISA7A6NL88 SNORD53B-201ENST00000577887 78 ntBASIC1.68□□□□□ -2.14
SHISA7A6NL88 MIR4680-201ENST00000580906 66 ntBASIC1.68□□□□□ -2.14
SHISA7A6NL88 MIR4452-201ENST00000583004 71 ntBASIC1.68□□□□□ -2.14
SHISA7A6NL88 MIR3935-201ENST00000583472 104 ntBASIC1.68□□□□□ -2.14
SHISA7A6NL88 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.68□□□□□ -2.14
SHISA7A6NL88 AC240442.1-201ENST00000616055 283 ntBASIC1.68□□□□□ -2.14
SHISA7A6NL88 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SHISA7A6NL88 RNU4-13P-201ENST00000364019 141 ntBASIC1.67□□□□□ -2.14
SHISA7A6NL88 SNORD48-201ENST00000364953 64 ntBASIC1.67□□□□□ -2.14
SHISA7A6NL88 RNU6-708P-201ENST00000384217 107 ntBASIC1.67□□□□□ -2.14
SHISA7A6NL88 RNU6-975P-201ENST00000384296 105 ntBASIC1.67□□□□□ -2.14
SHISA7A6NL88 RNU6-1160P-201ENST00000384546 104 ntBASIC1.67□□□□□ -2.14
SHISA7A6NL88 Y_RNA.527-201ENST00000384573 102 ntBASIC1.67□□□□□ -2.14
SHISA7A6NL88 MIR606-201ENST00000384851 96 ntBASIC1.67□□□□□ -2.14
SHISA7A6NL88 MIR613-201ENST00000385248 95 ntBASIC1.67□□□□□ -2.14
SHISA7A6NL88 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.67□□□□□ -2.14
SHISA7A6NL88 MIR1252-201ENST00000408861 65 ntBASIC1.67□□□□□ -2.14
SHISA7A6NL88 RNU6-408P-201ENST00000515910 100 ntBASIC1.67□□□□□ -2.14
SHISA7A6NL88 SNORA40.15-201ENST00000516884 107 ntBASIC1.67□□□□□ -2.14
SHISA7A6NL88 RNU6-856P-201ENST00000516959 98 ntBASIC1.67□□□□□ -2.14
SHISA7A6NL88 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.67□□□□□ -2.14
SHISA7A6NL88 MIR3684-201ENST00000579779 74 ntBASIC1.67□□□□□ -2.14
SHISA7A6NL88 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.67□□□□□ -2.14
SHISA7A6NL88 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.67□□□□□ -2.14
SHISA7A6NL88 AC010205.1-201ENST00000616668 449 ntBASIC1.67□□□□□ -2.14
SHISA7A6NL88 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.67□□□□□ -2.14
SHISA7A6NL88 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SHISA7A6NL88 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 AC245060.5-201ENST00000610778 3293 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 Y_RNA.162-201ENST00000363683 102 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 RNU6-450P-201ENST00000364654 107 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 RNU6-418P-201ENST00000384035 107 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 SNORA67.2-201ENST00000384300 149 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 RNU6-1235P-201ENST00000384559 107 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 Y_RNA.645-201ENST00000391229 102 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 RNU6-985P-201ENST00000410182 104 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 AL390729.2-201ENST00000416137 156 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 AC008134.1-201ENST00000420943 193 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 RNU6-498P-201ENST00000459468 107 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 HMGB3P17-201ENST00000504195 649 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 RNA5SP480-201ENST00000516840 109 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.66□□□□□ -2.14
SHISA7A6NL88 AC104695.3-201ENST00000604052 296 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 AL355297.3-201ENST00000604082 446 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 AC022513.1-201ENST00000624512 117 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 snoZ196.1-201ENST00000625269 89 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 MIR3674-201ENST00000636576 68 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 AL159152.1-201ENST00000635019 2587 ntBASIC1.66□□□□□ -2.14
SHISA7A6NL88 Y_RNA.145-201ENST00000363527 102 ntBASIC1.65□□□□□ -2.15
SHISA7A6NL88 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SHISA7A6NL88 RNA5SP489-201ENST00000410986 109 ntBASIC1.65□□□□□ -2.15
SHISA7A6NL88 RNU6-57P-201ENST00000411348 103 ntBASIC1.65□□□□□ -2.15
SHISA7A6NL88 AC009310.1-201ENST00000414414 451 ntBASIC1.65□□□□□ -2.15
SHISA7A6NL88 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.65□□□□□ -2.15
SHISA7A6NL88 RAB28P5-201ENST00000427490 651 ntBASIC1.65□□□□□ -2.15
SHISA7A6NL88 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.65□□□□□ -2.15
SHISA7A6NL88 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.65□□□□□ -2.15
SHISA7A6NL88 HMGN1P7-201ENST00000491722 313 ntBASIC1.65□□□□□ -2.15
SHISA7A6NL88 AC010469.2-201ENST00000496412 480 ntBASIC1.65□□□□□ -2.15
SHISA7A6NL88 RNVU1-2-201ENST00000516326 135 ntBASIC1.65□□□□□ -2.15
SHISA7A6NL88 SUMO2P18-201ENST00000518873 252 ntBASIC1.65□□□□□ -2.15
SHISA7A6NL88 AC022432.1-201ENST00000595739 310 ntBASIC1.65□□□□□ -2.15
SHISA7A6NL88 AC005176.2-201ENST00000596933 147 ntBASIC1.65□□□□□ -2.15
SHISA7A6NL88 AC006380.1-201ENST00000603598 186 ntBASIC1.65□□□□□ -2.15
SHISA7A6NL88 AC011476.5-201ENST00000615594 130 ntBASIC1.65□□□□□ -2.15
SHISA7A6NL88 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.65□□□□□ -2.15
SHISA7A6NL88 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.65□□□□□ -2.15
SHISA7A6NL88 uc_338.20-201ENST00000621563 178 ntBASIC1.65□□□□□ -2.15
SHISA7A6NL88 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
SHISA7A6NL88 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
SHISA7A6NL88 RNU6-626P-201ENST00000363354 107 ntBASIC1.64□□□□□ -2.15
SHISA7A6NL88 Y_RNA.230-201ENST00000364348 109 ntBASIC1.64□□□□□ -2.15
SHISA7A6NL88 Y_RNA.458-201ENST00000384240 102 ntBASIC1.64□□□□□ -2.15
SHISA7A6NL88 MIR548B-201ENST00000385247 97 ntBASIC1.64□□□□□ -2.15
SHISA7A6NL88 SUMO2P12-201ENST00000405924 140 ntBASIC1.64□□□□□ -2.15
SHISA7A6NL88 MIR1323-201ENST00000408090 73 ntBASIC1.64□□□□□ -2.15
SHISA7A6NL88 MIR1253-201ENST00000408273 105 ntBASIC1.64□□□□□ -2.15
SHISA7A6NL88 MIR1185-2-201ENST00000408687 86 ntBASIC1.64□□□□□ -2.15
SHISA7A6NL88 RNA5SP504-201ENST00000410676 117 ntBASIC1.64□□□□□ -2.15
SHISA7A6NL88 RNU5A-5P-201ENST00000411054 116 ntBASIC1.64□□□□□ -2.15
SHISA7A6NL88 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.64□□□□□ -2.15
SHISA7A6NL88 RPEP5-201ENST00000441137 268 ntBASIC1.64□□□□□ -2.15
SHISA7A6NL88 RNU6-1143P-201ENST00000516125 104 ntBASIC1.64□□□□□ -2.15
SHISA7A6NL88 RNU6-1146P-201ENST00000516282 102 ntBASIC1.64□□□□□ -2.15
SHISA7A6NL88 Y_RNA.720-201ENST00000517166 92 ntBASIC1.64□□□□□ -2.15
SHISA7A6NL88 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.64□□□□□ -2.15
SHISA7A6NL88 AC113195.1-201ENST00000579952 141 ntBASIC1.64□□□□□ -2.15
SHISA7A6NL88 AL357075.2-201ENST00000614906 189 ntBASIC1.64□□□□□ -2.15
SHISA7A6NL88 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.64□□□□□ -2.15
SHISA7A6NL88 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms