Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.69□□□□□ -1.82
USP17L3A6NCW0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
USP17L3A6NCW0 RNA5SP126-201ENST00000365092 109 ntBASIC3.69□□□□□ -1.82
USP17L3A6NCW0 RNU6-215P-201ENST00000365169 102 ntBASIC3.69□□□□□ -1.82
USP17L3A6NCW0 MIR184-201ENST00000384962 84 ntBASIC3.69□□□□□ -1.82
USP17L3A6NCW0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
USP17L3A6NCW0 EEF1B2P7-201ENST00000451177 676 ntBASIC3.69□□□□□ -1.82
USP17L3A6NCW0 SNORD11-201ENST00000459124 84 ntBASIC3.69□□□□□ -1.82
USP17L3A6NCW0 AC010401.1-201ENST00000463867 348 ntBASIC3.69□□□□□ -1.82
USP17L3A6NCW0 RNU6-1096P-201ENST00000517089 102 ntBASIC3.69□□□□□ -1.82
USP17L3A6NCW0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.69□□□□□ -1.82
USP17L3A6NCW0 Y_RNA.757-201ENST00000578934 114 ntBASIC3.69□□□□□ -1.82
USP17L3A6NCW0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.69□□□□□ -1.82
USP17L3A6NCW0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.69□□□□□ -1.82
USP17L3A6NCW0 AC110774.1-201ENST00000623567 2018 ntBASIC3.69□□□□□ -1.82
USP17L3A6NCW0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.69□□□□□ -1.82
USP17L3A6NCW0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
USP17L3A6NCW0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
USP17L3A6NCW0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.68□□□□□ -1.82
USP17L3A6NCW0 MIR423-201ENST00000362201 94 ntBASIC3.68□□□□□ -1.82
USP17L3A6NCW0 Y_RNA.796-201ENST00000364268 102 ntBASIC3.68□□□□□ -1.82
USP17L3A6NCW0 Y_RNA.799-201ENST00000364992 102 ntBASIC3.68□□□□□ -1.82
USP17L3A6NCW0 RNU2-48P-201ENST00000410694 191 ntBASIC3.68□□□□□ -1.82
USP17L3A6NCW0 RPS15AP28-201ENST00000435088 386 ntBASIC3.68□□□□□ -1.82
USP17L3A6NCW0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.68□□□□□ -1.82
USP17L3A6NCW0 MIR4662B-201ENST00000579498 81 ntBASIC3.68□□□□□ -1.82
USP17L3A6NCW0 MIR3616-201ENST00000584070 92 ntBASIC3.68□□□□□ -1.82
USP17L3A6NCW0 AC097639.2-201ENST00000603159 172 ntBASIC3.68□□□□□ -1.82
USP17L3A6NCW0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
USP17L3A6NCW0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
USP17L3A6NCW0 AC138915.1-201ENST00000565427 1685 ntBASIC3.68□□□□□ -1.82
USP17L3A6NCW0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.67□□□□□ -1.82
USP17L3A6NCW0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.67□□□□□ -1.82
USP17L3A6NCW0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.67□□□□□ -1.82
USP17L3A6NCW0 RNU6-834P-201ENST00000362367 110 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 snoU2-30.2-201ENST00000362805 70 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 RNU6-1209P-201ENST00000363655 107 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 RNY1P11-201ENST00000363759 113 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 AL138878.1-201ENST00000405131 347 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 CYCSP49-201ENST00000420810 319 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 AC060773.1-201ENST00000421698 310 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 AC244505.4-201ENST00000434905 287 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 SSXP5-201ENST00000443473 287 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 AC006539.3-201ENST00000454258 129 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 HMGN1P18-201ENST00000457642 277 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 RN7SKP132-201ENST00000516001 208 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 RNU6-659P-201ENST00000516454 104 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 NDUFA5P6-201ENST00000542110 379 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 MIR4644-201ENST00000579929 84 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 AC007229.1-201ENST00000590455 412 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.67□□□□□ -1.82
USP17L3A6NCW0 AC073413.2-201ENST00000604332 360 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 AC110741.2-201ENST00000605278 268 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 RMST_8.1-201ENST00000610287 165 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.67□□□□□ -1.82
USP17L3A6NCW0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.67□□□□□ -1.82
USP17L3A6NCW0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.67□□□□□ -1.82
USP17L3A6NCW0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
USP17L3A6NCW0 PWAR6-201ENST00000552334 4618 ntBASIC3.67□□□□□ -1.82
USP17L3A6NCW0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.67□□□□□ -1.82
USP17L3A6NCW0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.66□□□□□ -1.82
USP17L3A6NCW0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
USP17L3A6NCW0 MIR340-201ENST00000362125 95 ntBASIC3.66□□□□□ -1.82
USP17L3A6NCW0 MIR562-201ENST00000384894 95 ntBASIC3.66□□□□□ -1.82
USP17L3A6NCW0 RNU6-220P-201ENST00000390919 107 ntBASIC3.66□□□□□ -1.82
USP17L3A6NCW0 SNORA48.8-201ENST00000391324 134 ntBASIC3.66□□□□□ -1.82
USP17L3A6NCW0 RHEBP3-201ENST00000411920 351 ntBASIC3.66□□□□□ -1.82
USP17L3A6NCW0 AC105272.1-201ENST00000438604 198 ntBASIC3.66□□□□□ -1.82
USP17L3A6NCW0 OR9P1P-201ENST00000496431 281 ntBASIC3.66□□□□□ -1.82
USP17L3A6NCW0 AC011406.1-201ENST00000512440 370 ntBASIC3.66□□□□□ -1.82
USP17L3A6NCW0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.66□□□□□ -1.82
USP17L3A6NCW0 RNU6-667P-201ENST00000517186 102 ntBASIC3.66□□□□□ -1.82
USP17L3A6NCW0 AC090049.2-201ENST00000550377 109 ntBASIC3.66□□□□□ -1.82
USP17L3A6NCW0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.66□□□□□ -1.82
USP17L3A6NCW0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.66□□□□□ -1.82
USP17L3A6NCW0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
USP17L3A6NCW0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
USP17L3A6NCW0 RNU1-96P-201ENST00000364163 162 ntBASIC3.65□□□□□ -1.83
USP17L3A6NCW0 Y_RNA.634-201ENST00000364811 113 ntBASIC3.65□□□□□ -1.83
USP17L3A6NCW0 RNU6-1186P-201ENST00000410429 97 ntBASIC3.65□□□□□ -1.83
USP17L3A6NCW0 Y_RNA.621-201ENST00000411065 96 ntBASIC3.65□□□□□ -1.83
USP17L3A6NCW0 SCGB1D5P-201ENST00000515134 247 ntBASIC3.65□□□□□ -1.83
USP17L3A6NCW0 RNU1-143P-201ENST00000516296 146 ntBASIC3.65□□□□□ -1.83
USP17L3A6NCW0 RNU6-919P-201ENST00000516731 104 ntBASIC3.65□□□□□ -1.83
USP17L3A6NCW0 U1.23-201ENST00000610293 146 ntBASIC3.65□□□□□ -1.83
USP17L3A6NCW0 RNU1-68P-201ENST00000615382 146 ntBASIC3.65□□□□□ -1.83
USP17L3A6NCW0 U1.39-201ENST00000621562 146 ntBASIC3.65□□□□□ -1.83
USP17L3A6NCW0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
USP17L3A6NCW0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
USP17L3A6NCW0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
USP17L3A6NCW0 Y_RNA.91-201ENST00000363042 107 ntBASIC3.64□□□□□ -1.83
USP17L3A6NCW0 RNU6-1138P-201ENST00000365359 106 ntBASIC3.64□□□□□ -1.83
USP17L3A6NCW0 RNU6-1336P-201ENST00000383886 109 ntBASIC3.64□□□□□ -1.83
USP17L3A6NCW0 MIR592-201ENST00000384959 97 ntBASIC3.64□□□□□ -1.83
USP17L3A6NCW0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
USP17L3A6NCW0 AC003685.2-201ENST00000422795 395 ntBASIC3.64□□□□□ -1.83
USP17L3A6NCW0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.64□□□□□ -1.83
USP17L3A6NCW0 RNU7-99P-201ENST00000516271 62 ntBASIC3.64□□□□□ -1.83
USP17L3A6NCW0 RNU7-149P-201ENST00000516739 59 ntBASIC3.64□□□□□ -1.83
USP17L3A6NCW0 MIR4319-201ENST00000577285 85 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms