Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 AP006437.1-201ENST00000641440 3685 ntBASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 U3.8-201ENST00000363675 217 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 SNORA25.6-201ENST00000364121 118 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 RNU4-84P-201ENST00000364200 139 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 RNU6-1305P-201ENST00000364353 104 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 SNORD87-201ENST00000364849 89 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 SNORA25B-201ENST00000365507 128 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 Y_RNA.400-201ENST00000383963 111 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 Y_RNA.412-201ENST00000384001 104 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 Y_RNA.497-201ENST00000384447 98 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 RNU2-48P-201ENST00000410694 191 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 Z98742.3-201ENST00000418637 326 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 AC009238.1-201ENST00000442165 424 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 AC009237.6-201ENST00000446969 424 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 HMGN2P18-201ENST00000450680 270 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 AC018868.1-201ENST00000491307 315 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 RNA5SP490-201ENST00000517141 136 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 AL365222.1-201ENST00000614661 98 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 AC006001.4-201ENST00000622243 395 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 FO624990.1-201ENST00000636373 85 ntBASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
CCDC187A0A096LP49 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 RNU6-1272P-201ENST00000362776 107 ntBASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 Y_RNA.75-201ENST00000362927 97 ntBASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 RNU6-312P-201ENST00000364629 107 ntBASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 RNU6-438P-201ENST00000365561 103 ntBASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 RNU6-1264P-201ENST00000383891 107 ntBASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 MIR518C-201ENST00000384822 101 ntBASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 RAB28P5-201ENST00000427490 651 ntBASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 AC016925.1-201ENST00000458303 298 ntBASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 snoU13.15-201ENST00000459407 104 ntBASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 AC114982.1-201ENST00000469402 321 ntBASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 HMGN2P9-201ENST00000476875 229 ntBASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 RPS29P21-201ENST00000496272 170 ntBASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 RNU6-313P-201ENST00000516317 112 ntBASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 RNU6-107P-201ENST00000516643 102 ntBASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 RNU6-667P-201ENST00000517186 102 ntBASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 MIR3145-201ENST00000580727 82 ntBASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 MIR4753-201ENST00000585119 83 ntBASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.42□□□□□ -2.02
CCDC187A0A096LP49 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 AC068700.1-201ENST00000565862 3754 ntBASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 Y_RNA.23-201ENST00000362496 106 ntBASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 RNU6-743P-201ENST00000364151 106 ntBASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 Y_RNA.215-201ENST00000364204 112 ntBASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 RNU6-1310P-201ENST00000384153 107 ntBASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 RNU1-52P-201ENST00000384190 164 ntBASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 MIR569-201ENST00000385228 96 ntBASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 RNU6-1154P-201ENST00000391001 104 ntBASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 RNU6-257P-201ENST00000410238 98 ntBASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 AC007064.1-201ENST00000412238 351 ntBASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 AC024067.1-201ENST00000426199 223 ntBASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 AC074290.1-201ENST00000448883 135 ntBASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 AL137159.1-201ENST00000452808 512 ntBASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 Y_RNA.637-201ENST00000459424 114 ntBASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 RN7SL636P-201ENST00000497504 294 ntBASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 AC005840.1-201ENST00000498412 377 ntBASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 MIR4524B-201ENST00000581569 115 ntBASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 MIR5194-201ENST00000582634 120 ntBASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC187A0A096LP49 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC187A0A096LP49 RNA5SP393-201ENST00000363423 117 ntBASIC2.4□□□□□ -2.03
CCDC187A0A096LP49 Y_RNA.238-201ENST00000364441 102 ntBASIC2.4□□□□□ -2.03
CCDC187A0A096LP49 RNU6-449P-201ENST00000383914 107 ntBASIC2.4□□□□□ -2.03
CCDC187A0A096LP49 Y_RNA.488-201ENST00000384403 102 ntBASIC2.4□□□□□ -2.03
CCDC187A0A096LP49 TOMM22P2-201ENST00000430735 237 ntBASIC2.4□□□□□ -2.03
CCDC187A0A096LP49 RNU6-426P-201ENST00000516464 97 ntBASIC2.4□□□□□ -2.03
CCDC187A0A096LP49 SNORD116-25-201ENST00000516517 92 ntBASIC2.4□□□□□ -2.03
CCDC187A0A096LP49 RNU6-62P-201ENST00000516526 102 ntBASIC2.4□□□□□ -2.03
CCDC187A0A096LP49 RNU7-121P-201ENST00000516604 62 ntBASIC2.4□□□□□ -2.03
CCDC187A0A096LP49 IGKV3-31-201ENST00000523109 329 ntBASIC2.4□□□□□ -2.03
CCDC187A0A096LP49 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CCDC187A0A096LP49 AC010297.1-201ENST00000623948 149 ntBASIC2.4□□□□□ -2.03
CCDC187A0A096LP49 AC091932.3-201ENST00000624223 323 ntBASIC2.4□□□□□ -2.03
CCDC187A0A096LP49 MIR3674-201ENST00000636576 68 ntBASIC2.4□□□□□ -2.03
CCDC187A0A096LP49 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC187A0A096LP49 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC187A0A096LP49 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 Y_RNA.7-201ENST00000362352 102 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 Y_RNA.121-201ENST00000363309 113 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 SNORA72.2-201ENST00000365028 127 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 RNU6-215P-201ENST00000365169 102 ntBASIC2.39□□□□□ -2.03
CCDC187A0A096LP49 Y_RNA.343-201ENST00000365354 112 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 226.1 ms