Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
GTF3C3Q9Y5Q9 RNU6-1205P-201ENST00000363625 106 ntBASIC3.69□□□□□ -1.82
GTF3C3Q9Y5Q9 U8.7-201ENST00000364940 136 ntBASIC3.69□□□□□ -1.82
GTF3C3Q9Y5Q9 RNU6-338P-201ENST00000383888 105 ntBASIC3.69□□□□□ -1.82
GTF3C3Q9Y5Q9 RNU1-138P-201ENST00000384093 164 ntBASIC3.69□□□□□ -1.82
GTF3C3Q9Y5Q9 Y_RNA.539-201ENST00000384635 107 ntBASIC3.69□□□□□ -1.82
GTF3C3Q9Y5Q9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
GTF3C3Q9Y5Q9 RNA5SP212-201ENST00000391223 107 ntBASIC3.69□□□□□ -1.82
GTF3C3Q9Y5Q9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.69□□□□□ -1.82
GTF3C3Q9Y5Q9 RNU1-95P-201ENST00000516357 160 ntBASIC3.69□□□□□ -1.82
GTF3C3Q9Y5Q9 RNU1-128P-201ENST00000516704 160 ntBASIC3.69□□□□□ -1.82
GTF3C3Q9Y5Q9 RNU6-1096P-201ENST00000517089 102 ntBASIC3.69□□□□□ -1.82
GTF3C3Q9Y5Q9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.69□□□□□ -1.82
GTF3C3Q9Y5Q9 AL442067.1-201ENST00000613261 223 ntBASIC3.69□□□□□ -1.82
GTF3C3Q9Y5Q9 SNORA7.4-201ENST00000384249 137 ntBASIC3.68□□□□□ -1.82
GTF3C3Q9Y5Q9 AC091021.1-201ENST00000468051 388 ntBASIC3.68□□□□□ -1.82
GTF3C3Q9Y5Q9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.68□□□□□ -1.82
GTF3C3Q9Y5Q9 AC024405.2-202ENST00000532731 184 ntBASIC3.68□□□□□ -1.82
GTF3C3Q9Y5Q9 MIR4643-201ENST00000577473 78 ntBASIC3.68□□□□□ -1.82
GTF3C3Q9Y5Q9 AC091178.2-201ENST00000584401 117 ntBASIC3.68□□□□□ -1.82
GTF3C3Q9Y5Q9 MIR3651-201ENST00000630427 90 ntBASIC3.68□□□□□ -1.82
GTF3C3Q9Y5Q9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
GTF3C3Q9Y5Q9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GTF3C3Q9Y5Q9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.67□□□□□ -1.82
GTF3C3Q9Y5Q9 AC011604.1-201ENST00000545978 196 ntBASIC3.67□□□□□ -1.82
GTF3C3Q9Y5Q9 MIR3160-1-201ENST00000577972 85 ntBASIC3.67□□□□□ -1.82
GTF3C3Q9Y5Q9 MIR5688-201ENST00000580619 83 ntBASIC3.67□□□□□ -1.82
GTF3C3Q9Y5Q9 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.67□□□□□ -1.82
GTF3C3Q9Y5Q9 AC134026.1-201ENST00000623249 2239 ntBASIC3.67□□□□□ -1.82
GTF3C3Q9Y5Q9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.66□□□□□ -1.82
GTF3C3Q9Y5Q9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
GTF3C3Q9Y5Q9 ZNF702P-202ENST00000434269 1966 ntBASIC3.66□□□□□ -1.82
GTF3C3Q9Y5Q9 MIR22-201ENST00000362190 85 ntBASIC3.66□□□□□ -1.82
GTF3C3Q9Y5Q9 RNA5SP479-201ENST00000364858 117 ntBASIC3.66□□□□□ -1.82
GTF3C3Q9Y5Q9 Y_RNA.292-201ENST00000364904 97 ntBASIC3.66□□□□□ -1.82
GTF3C3Q9Y5Q9 RNU2-14P-201ENST00000411053 191 ntBASIC3.66□□□□□ -1.82
GTF3C3Q9Y5Q9 AL158823.1-201ENST00000418441 478 ntBASIC3.66□□□□□ -1.82
GTF3C3Q9Y5Q9 RPS4XP11-201ENST00000446897 772 ntBASIC3.66□□□□□ -1.82
GTF3C3Q9Y5Q9 AC233266.1-201ENST00000454518 96 ntBASIC3.66□□□□□ -1.82
GTF3C3Q9Y5Q9 COX6CP14-201ENST00000469580 174 ntBASIC3.66□□□□□ -1.82
GTF3C3Q9Y5Q9 RPL23AP54-201ENST00000495129 419 ntBASIC3.66□□□□□ -1.82
GTF3C3Q9Y5Q9 RNA5SP481-201ENST00000516814 122 ntBASIC3.66□□□□□ -1.82
GTF3C3Q9Y5Q9 RNU6-388P-201ENST00000517012 105 ntBASIC3.66□□□□□ -1.82
GTF3C3Q9Y5Q9 RNU6-389P-201ENST00000517048 105 ntBASIC3.66□□□□□ -1.82
GTF3C3Q9Y5Q9 AC127455.1-201ENST00000565496 145 ntBASIC3.66□□□□□ -1.82
GTF3C3Q9Y5Q9 AC242852.1-201ENST00000612151 96 ntBASIC3.66□□□□□ -1.82
GTF3C3Q9Y5Q9 AC244015.1-201ENST00000622301 99 ntBASIC3.66□□□□□ -1.82
GTF3C3Q9Y5Q9 Y_RNA.267-201ENST00000364679 109 ntBASIC3.65□□□□□ -1.83
GTF3C3Q9Y5Q9 Y_RNA.269-201ENST00000364685 89 ntBASIC3.65□□□□□ -1.83
GTF3C3Q9Y5Q9 AL512604.1-201ENST00000404812 257 ntBASIC3.65□□□□□ -1.83
GTF3C3Q9Y5Q9 SNORA36B-201ENST00000410438 131 ntBASIC3.65□□□□□ -1.83
GTF3C3Q9Y5Q9 AC063976.3-201ENST00000426849 329 ntBASIC3.65□□□□□ -1.83
GTF3C3Q9Y5Q9 AC245047.4-201ENST00000433189 144 ntBASIC3.65□□□□□ -1.83
GTF3C3Q9Y5Q9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.65□□□□□ -1.83
GTF3C3Q9Y5Q9 TRBV12-1-201ENST00000479785 344 ntBASIC3.65□□□□□ -1.83
GTF3C3Q9Y5Q9 AP002004.2-201ENST00000531656 154 ntBASIC3.65□□□□□ -1.83
GTF3C3Q9Y5Q9 ZNF861P-201ENST00000588126 639 ntBASIC3.65□□□□□ -1.83
GTF3C3Q9Y5Q9 VN1R85P-201ENST00000601587 426 ntBASIC3.65□□□□□ -1.83
GTF3C3Q9Y5Q9 AL008718.3-201ENST00000610217 321 ntBASIC3.65□□□□□ -1.83
GTF3C3Q9Y5Q9 Z82195.2-201ENST00000612348 18351 ntBASIC3.65□□□□□ -1.83
GTF3C3Q9Y5Q9 AC100821.1-201ENST00000523153 2479 ntBASIC3.65□□□□□ -1.83
GTF3C3Q9Y5Q9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.64□□□□□ -1.83
GTF3C3Q9Y5Q9 MIR26A1-201ENST00000362205 77 ntBASIC3.64□□□□□ -1.83
GTF3C3Q9Y5Q9 RNU6-1048P-201ENST00000364054 107 ntBASIC3.64□□□□□ -1.83
GTF3C3Q9Y5Q9 RNY1-201ENST00000364228 113 ntBASIC3.64□□□□□ -1.83
GTF3C3Q9Y5Q9 Y_RNA.293-201ENST00000364908 93 ntBASIC3.64□□□□□ -1.83
GTF3C3Q9Y5Q9 SNORA6-201ENST00000384033 151 ntBASIC3.64□□□□□ -1.83
GTF3C3Q9Y5Q9 SNORA80E-201ENST00000384744 137 ntBASIC3.64□□□□□ -1.83
GTF3C3Q9Y5Q9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.64□□□□□ -1.83
GTF3C3Q9Y5Q9 MIR2681-201ENST00000581814 105 ntBASIC3.64□□□□□ -1.83
GTF3C3Q9Y5Q9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.64□□□□□ -1.83
GTF3C3Q9Y5Q9 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.64□□□□□ -1.83
GTF3C3Q9Y5Q9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
GTF3C3Q9Y5Q9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
GTF3C3Q9Y5Q9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
GTF3C3Q9Y5Q9 SNORA63D-201ENST00000364359 132 ntBASIC3.63□□□□□ -1.83
GTF3C3Q9Y5Q9 Y_RNA.621-201ENST00000411065 96 ntBASIC3.63□□□□□ -1.83
GTF3C3Q9Y5Q9 AC245047.3-201ENST00000429428 127 ntBASIC3.63□□□□□ -1.83
GTF3C3Q9Y5Q9 RNA5SP57-201ENST00000459463 123 ntBASIC3.63□□□□□ -1.83
GTF3C3Q9Y5Q9 RNU2-56P-201ENST00000516826 190 ntBASIC3.63□□□□□ -1.83
GTF3C3Q9Y5Q9 MIR622-201ENST00000638396 96 ntBASIC3.63□□□□□ -1.83
GTF3C3Q9Y5Q9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GTF3C3Q9Y5Q9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
GTF3C3Q9Y5Q9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
GTF3C3Q9Y5Q9 Y_RNA.76-201ENST00000362931 109 ntBASIC3.62□□□□□ -1.83
GTF3C3Q9Y5Q9 RNU6-112P-201ENST00000363599 104 ntBASIC3.62□□□□□ -1.83
GTF3C3Q9Y5Q9 Y_RNA.257-201ENST00000364596 102 ntBASIC3.62□□□□□ -1.83
GTF3C3Q9Y5Q9 Y_RNA.262-201ENST00000364641 102 ntBASIC3.62□□□□□ -1.83
GTF3C3Q9Y5Q9 MIR1193-201ENST00000408109 78 ntBASIC3.62□□□□□ -1.83
GTF3C3Q9Y5Q9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.62□□□□□ -1.83
GTF3C3Q9Y5Q9 AC105272.1-201ENST00000438604 198 ntBASIC3.62□□□□□ -1.83
GTF3C3Q9Y5Q9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.62□□□□□ -1.83
GTF3C3Q9Y5Q9 RNU7-28P-201ENST00000516759 62 ntBASIC3.62□□□□□ -1.83
GTF3C3Q9Y5Q9 AC093732.2-201ENST00000607950 274 ntBASIC3.62□□□□□ -1.83
GTF3C3Q9Y5Q9 AC009093.8-201ENST00000641769 292 ntBASIC3.62□□□□□ -1.83
GTF3C3Q9Y5Q9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.62□□□□□ -1.83
GTF3C3Q9Y5Q9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
GTF3C3Q9Y5Q9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.62□□□□□ -1.83
GTF3C3Q9Y5Q9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
GTF3C3Q9Y5Q9 RN7SKP200-201ENST00000410564 320 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms