Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNA5SP467-201ENST00000391274 118 ntBASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 AC091390.1-201ENST00000433904 331 ntBASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 RPS29P7-201ENST00000439662 171 ntBASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 RNU6-693P-201ENST00000516134 107 ntBASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 RN7SKP21-201ENST00000516503 220 ntBASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 RNU6-579P-201ENST00000516879 102 ntBASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 RNU6-1270P-201ENST00000517128 108 ntBASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 MIR3160-1-201ENST00000577972 85 ntBASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 MIR338-201ENST00000636369 67 ntBASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 ZNF271P-202ENST00000465539 1970 ntBASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA11Q9Y5H2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
PCDHGA11Q9Y5H2 AC007064.1-201ENST00000412238 351 ntBASIC3.5□□□□□ -1.85
PCDHGA11Q9Y5H2 SNRPGP13-201ENST00000442212 177 ntBASIC3.5□□□□□ -1.85
PCDHGA11Q9Y5H2 RN7SKP282-201ENST00000516824 299 ntBASIC3.5□□□□□ -1.85
PCDHGA11Q9Y5H2 RNU7-128P-201ENST00000517247 62 ntBASIC3.5□□□□□ -1.85
PCDHGA11Q9Y5H2 MIR3616-201ENST00000584070 92 ntBASIC3.5□□□□□ -1.85
PCDHGA11Q9Y5H2 AC022217.4-201ENST00000604389 163 ntBASIC3.5□□□□□ -1.85
PCDHGA11Q9Y5H2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
PCDHGA11Q9Y5H2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA11Q9Y5H2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 AC008555.8-201ENST00000623602 2168 ntBASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 RNA5SP387-201ENST00000364226 106 ntBASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 SNORD21-201ENST00000383953 95 ntBASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 SNORD72-201ENST00000390994 80 ntBASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 MIR1263-201ENST00000408324 86 ntBASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 AL049830.1-201ENST00000468034 425 ntBASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 RN7SL636P-201ENST00000497504 294 ntBASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 AC026402.1-201ENST00000513642 170 ntBASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 RNU2-27P-201ENST00000516185 142 ntBASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 RNU6-412P-201ENST00000516434 106 ntBASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 VN1R85P-201ENST00000601587 426 ntBASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 MIR7153-201ENST00000637758 57 ntBASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA11Q9Y5H2 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHGA11Q9Y5H2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
PCDHGA11Q9Y5H2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA11Q9Y5H2 Y_RNA.99-201ENST00000363138 105 ntBASIC3.48□□□□□ -1.85
PCDHGA11Q9Y5H2 RNA5SP42-201ENST00000364278 115 ntBASIC3.48□□□□□ -1.85
PCDHGA11Q9Y5H2 MIR592-201ENST00000384959 97 ntBASIC3.48□□□□□ -1.85
PCDHGA11Q9Y5H2 RNA5SP136-201ENST00000410906 107 ntBASIC3.48□□□□□ -1.85
PCDHGA11Q9Y5H2 RNU1-131P-201ENST00000458943 161 ntBASIC3.48□□□□□ -1.85
PCDHGA11Q9Y5H2 Y_RNA.666-201ENST00000516187 112 ntBASIC3.48□□□□□ -1.85
PCDHGA11Q9Y5H2 RNU6-168P-201ENST00000516189 101 ntBASIC3.48□□□□□ -1.85
PCDHGA11Q9Y5H2 AC024995.1-201ENST00000523014 93 ntBASIC3.48□□□□□ -1.85
PCDHGA11Q9Y5H2 AP002004.2-201ENST00000531656 154 ntBASIC3.48□□□□□ -1.85
PCDHGA11Q9Y5H2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA11Q9Y5H2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA11Q9Y5H2 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHGA11Q9Y5H2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
PCDHGA11Q9Y5H2 RNU6-1255P-201ENST00000363434 112 ntBASIC3.47□□□□□ -1.85
PCDHGA11Q9Y5H2 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PCDHGA11Q9Y5H2 AC003685.2-201ENST00000422795 395 ntBASIC3.47□□□□□ -1.85
PCDHGA11Q9Y5H2 FTH1P12-201ENST00000432137 551 ntBASIC3.47□□□□□ -1.85
PCDHGA11Q9Y5H2 ATP5J2P3-201ENST00000451550 258 ntBASIC3.47□□□□□ -1.85
PCDHGA11Q9Y5H2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHGA11Q9Y5H2 RNA5SP236-201ENST00000516169 116 ntBASIC3.47□□□□□ -1.85
PCDHGA11Q9Y5H2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDHGA11Q9Y5H2 AP003355.3-201ENST00000623465 114 ntBASIC3.47□□□□□ -1.85
PCDHGA11Q9Y5H2 SNORA50A-202ENST00000629536 136 ntBASIC3.47□□□□□ -1.85
PCDHGA11Q9Y5H2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHGA11Q9Y5H2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
PCDHGA11Q9Y5H2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHGA11Q9Y5H2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PCDHGA11Q9Y5H2 SNORA8-201ENST00000384574 139 ntBASIC3.46□□□□□ -1.86
PCDHGA11Q9Y5H2 RNU6-220P-201ENST00000390919 107 ntBASIC3.46□□□□□ -1.86
PCDHGA11Q9Y5H2 AC092185.1-201ENST00000491371 97 ntBASIC3.46□□□□□ -1.86
PCDHGA11Q9Y5H2 AC104619.4-201ENST00000510773 249 ntBASIC3.46□□□□□ -1.86
PCDHGA11Q9Y5H2 SCGB1D5P-201ENST00000515134 247 ntBASIC3.46□□□□□ -1.86
PCDHGA11Q9Y5H2 RNU6-1149P-201ENST00000516810 97 ntBASIC3.46□□□□□ -1.86
PCDHGA11Q9Y5H2 AL591926.4-201ENST00000616895 298 ntBASIC3.46□□□□□ -1.86
PCDHGA11Q9Y5H2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHGA11Q9Y5H2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PCDHGA11Q9Y5H2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHGA11Q9Y5H2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.46□□□□□ -1.86
PCDHGA11Q9Y5H2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHGA11Q9Y5H2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PCDHGA11Q9Y5H2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHGA11Q9Y5H2 SNORA25B-201ENST00000365507 128 ntBASIC3.45□□□□□ -1.86
PCDHGA11Q9Y5H2 Y_RNA.528-201ENST00000384575 108 ntBASIC3.45□□□□□ -1.86
PCDHGA11Q9Y5H2 RNU6-160P-201ENST00000384591 107 ntBASIC3.45□□□□□ -1.86
PCDHGA11Q9Y5H2 AL031737.1-201ENST00000450125 223 ntBASIC3.45□□□□□ -1.86
PCDHGA11Q9Y5H2 RN7SL601P-201ENST00000471221 293 ntBASIC3.45□□□□□ -1.86
PCDHGA11Q9Y5H2 AC018868.1-201ENST00000491307 315 ntBASIC3.45□□□□□ -1.86
PCDHGA11Q9Y5H2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDHGA11Q9Y5H2 AC068657.1-201ENST00000520807 306 ntBASIC3.45□□□□□ -1.86
PCDHGA11Q9Y5H2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.45□□□□□ -1.86
PCDHGA11Q9Y5H2 PWAR6-201ENST00000552334 4618 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms