Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 U6.99-201ENST00000637524 83 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 AF127577.6-201ENST00000623352 2191 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.1
NOTCH3Q9UM47 AC010329.5-201ENST00000623497 2174 ntBASIC1.9□□□□□ -2.1
NOTCH3Q9UM47 SNORA51.4-201ENST00000364993 124 ntBASIC1.9□□□□□ -2.1
NOTCH3Q9UM47 Y_RNA.310-201ENST00000365063 113 ntBASIC1.9□□□□□ -2.1
NOTCH3Q9UM47 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
NOTCH3Q9UM47 MIR548A3-201ENST00000385297 97 ntBASIC1.9□□□□□ -2.1
NOTCH3Q9UM47 SNORD37.2-201ENST00000391075 66 ntBASIC1.9□□□□□ -2.1
NOTCH3Q9UM47 EI24P2-201ENST00000397776 1076 ntBASIC1.9□□□□□ -2.1
NOTCH3Q9UM47 AL031003.1-201ENST00000404229 172 ntBASIC1.9□□□□□ -2.1
NOTCH3Q9UM47 U3.40-201ENST00000408706 208 ntBASIC1.9□□□□□ -2.1
NOTCH3Q9UM47 HMGN2P30-201ENST00000423237 256 ntBASIC1.9□□□□□ -2.1
NOTCH3Q9UM47 RPL27AP8-201ENST00000424277 446 ntBASIC1.9□□□□□ -2.1
NOTCH3Q9UM47 RPS29P24-201ENST00000486345 171 ntBASIC1.9□□□□□ -2.1
NOTCH3Q9UM47 AC026436.1-201ENST00000510537 270 ntBASIC1.9□□□□□ -2.1
NOTCH3Q9UM47 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.9□□□□□ -2.1
NOTCH3Q9UM47 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 MIR337-201ENST00000362281 93 ntBASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 RNU1-62P-201ENST00000362599 164 ntBASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 SNORD114-1-201ENST00000362705 72 ntBASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 Y_RNA.572-201ENST00000384757 98 ntBASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 MIR153-1-201ENST00000384914 90 ntBASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 SNORA79-201ENST00000408376 140 ntBASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 RNU6-710P-201ENST00000410424 105 ntBASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 AC078809.1-201ENST00000427601 140 ntBASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 RNU5F-2P-201ENST00000516066 82 ntBASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 RNU6-561P-201ENST00000516222 102 ntBASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 RNU4-60P-201ENST00000517239 135 ntBASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 HSPE1P4-201ENST00000550617 308 ntBASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 MIR4635-201ENST00000583759 79 ntBASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 AC120024.3-201ENST00000603167 156 ntBASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 AC090132.2-201ENST00000615881 347 ntBASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 AC138915.1-201ENST00000565427 1685 ntBASIC1.9□□□□□ -2.11
NOTCH3Q9UM47 RNU6-1285P-201ENST00000363480 105 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 RNU6-1048P-201ENST00000364054 107 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 Y_RNA.361-201ENST00000365515 120 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 RNU6-793P-201ENST00000384233 104 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 SNORA64-201ENST00000384674 134 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 RNY4P29-201ENST00000410801 97 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 RNU2-68P-201ENST00000410878 191 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 RN7SKP19-201ENST00000516016 252 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 AC093331.1-201ENST00000521474 169 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 AC105137.2-201ENST00000569073 466 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 AP000942.3-201ENST00000603702 160 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 AP001318.4-201ENST00000616637 121 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 AL139811.1-201ENST00000424779 2299 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 SNORD45.3-201ENST00000363836 72 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 SNORD73B-201ENST00000364394 72 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 RNU6-1164P-201ENST00000364428 107 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 Y_RNA.281-201ENST00000364774 94 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 RNU6-178P-201ENST00000384631 104 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 MIR526A2-201ENST00000390198 65 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 CBX3P9-201ENST00000402326 552 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 RN7SKP61-201ENST00000410642 295 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 SNRPGP7-201ENST00000469016 106 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 RNU6-197P-201ENST00000516680 100 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 RNU6-703P-201ENST00000516946 107 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 RNU6-1183P-201ENST00000517054 60 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 AC006065.5-201ENST00000623427 349 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 MIR3914-2-201ENST00000637339 95 ntBASIC1.89□□□□□ -2.11
NOTCH3Q9UM47 RNU6-309P-201ENST00000364573 106 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 Y_RNA.346-201ENST00000365385 112 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 Y_RNA.415-201ENST00000384012 112 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 SNORD116-21-201ENST00000384507 92 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 SNORD72-201ENST00000390994 80 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 AL021397.1-201ENST00000451806 248 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 RNU7-170P-201ENST00000459303 61 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 RPL23AP42-201ENST00000471152 471 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 AC234781.5-201ENST00000508429 271 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 RNA5SP291-201ENST00000517222 105 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 MIR8070-201ENST00000616510 88 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 ADAM3A-203ENST00000461344 2157 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 RNU6-144P-201ENST00000383951 107 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 RNY3P5-201ENST00000384127 102 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 SNORA20B-201ENST00000384220 132 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 RNU6-880P-201ENST00000384526 107 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 SNORA75.5-201ENST00000391291 81 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 RPL26P27-201ENST00000414397 437 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 Z98742.3-201ENST00000418637 326 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 SNORA70.12-201ENST00000516084 153 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 RNU6-581P-201ENST00000516214 105 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 SNORA40.13-201ENST00000516379 120 ntBASIC1.88□□□□□ -2.11
NOTCH3Q9UM47 AC131055.1-201ENST00000584626 316 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms