Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 SNORA70.4-201ENST00000365509 134 ntBASIC3.56□□□□□ -1.84
BRPF3Q9ULD4 RNU6-1323P-201ENST00000384025 107 ntBASIC3.56□□□□□ -1.84
BRPF3Q9ULD4 RNU6-239P-201ENST00000390990 99 ntBASIC3.56□□□□□ -1.84
BRPF3Q9ULD4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.56□□□□□ -1.84
BRPF3Q9ULD4 AL137159.1-201ENST00000452808 512 ntBASIC3.56□□□□□ -1.84
BRPF3Q9ULD4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.56□□□□□ -1.84
BRPF3Q9ULD4 SCARNA13-201ENST00000516672 275 ntBASIC3.56□□□□□ -1.84
BRPF3Q9ULD4 AC109810.1-201ENST00000534066 224 ntBASIC3.56□□□□□ -1.84
BRPF3Q9ULD4 AC005972.2-201ENST00000604690 348 ntBASIC3.56□□□□□ -1.84
BRPF3Q9ULD4 AL391903.3-201ENST00000612158 163 ntBASIC3.56□□□□□ -1.84
BRPF3Q9ULD4 MIR8057-201ENST00000620957 69 ntBASIC3.56□□□□□ -1.84
BRPF3Q9ULD4 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.56□□□□□ -1.84
BRPF3Q9ULD4 MIR203B-201ENST00000636080 86 ntBASIC3.56□□□□□ -1.84
BRPF3Q9ULD4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
BRPF3Q9ULD4 SNORA25.6-201ENST00000364121 118 ntBASIC3.55□□□□□ -1.84
BRPF3Q9ULD4 Y_RNA.400-201ENST00000383963 111 ntBASIC3.55□□□□□ -1.84
BRPF3Q9ULD4 RNU6-383P-201ENST00000410864 94 ntBASIC3.55□□□□□ -1.84
BRPF3Q9ULD4 RNU6-63P-201ENST00000516690 95 ntBASIC3.55□□□□□ -1.84
BRPF3Q9ULD4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.55□□□□□ -1.84
BRPF3Q9ULD4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.55□□□□□ -1.84
BRPF3Q9ULD4 AC090616.3-201ENST00000582184 217 ntBASIC3.55□□□□□ -1.84
BRPF3Q9ULD4 POLR3GP1-201ENST00000594073 261 ntBASIC3.55□□□□□ -1.84
BRPF3Q9ULD4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.55□□□□□ -1.84
BRPF3Q9ULD4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
BRPF3Q9ULD4 MIR22-201ENST00000362190 85 ntBASIC3.54□□□□□ -1.84
BRPF3Q9ULD4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
BRPF3Q9ULD4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.54□□□□□ -1.84
BRPF3Q9ULD4 AL135786.1-201ENST00000415892 214 ntBASIC3.54□□□□□ -1.84
BRPF3Q9ULD4 AC010154.1-201ENST00000425857 269 ntBASIC3.54□□□□□ -1.84
BRPF3Q9ULD4 MTCO1P44-201ENST00000441935 243 ntBASIC3.54□□□□□ -1.84
BRPF3Q9ULD4 AC093259.1-201ENST00000509755 300 ntBASIC3.54□□□□□ -1.84
BRPF3Q9ULD4 RNU6-991P-201ENST00000516168 107 ntBASIC3.54□□□□□ -1.84
BRPF3Q9ULD4 RNU7-116P-201ENST00000516940 62 ntBASIC3.54□□□□□ -1.84
BRPF3Q9ULD4 RN7SKP57-201ENST00000517248 293 ntBASIC3.54□□□□□ -1.84
BRPF3Q9ULD4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.54□□□□□ -1.84
BRPF3Q9ULD4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.54□□□□□ -1.84
BRPF3Q9ULD4 AC127455.1-201ENST00000565496 145 ntBASIC3.54□□□□□ -1.84
BRPF3Q9ULD4 AL355297.2-201ENST00000604792 129 ntBASIC3.54□□□□□ -1.84
BRPF3Q9ULD4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
BRPF3Q9ULD4 MIR181A2-201ENST00000384863 110 ntBASIC3.53□□□□□ -1.84
BRPF3Q9ULD4 MT-TT-201ENST00000387460 66 ntBASIC3.53□□□□□ -1.84
BRPF3Q9ULD4 AC123900.1-201ENST00000420390 96 ntBASIC3.53□□□□□ -1.84
BRPF3Q9ULD4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.53□□□□□ -1.84
BRPF3Q9ULD4 AL357134.1-201ENST00000445848 426 ntBASIC3.53□□□□□ -1.84
BRPF3Q9ULD4 RPS27P22-201ENST00000478056 241 ntBASIC3.53□□□□□ -1.84
BRPF3Q9ULD4 AC091826.1-201ENST00000514065 313 ntBASIC3.53□□□□□ -1.84
BRPF3Q9ULD4 SNORD116-25-201ENST00000516517 92 ntBASIC3.53□□□□□ -1.84
BRPF3Q9ULD4 RNU7-121P-201ENST00000516604 62 ntBASIC3.53□□□□□ -1.84
BRPF3Q9ULD4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.53□□□□□ -1.84
BRPF3Q9ULD4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.53□□□□□ -1.84
BRPF3Q9ULD4 Y_RNA.778-201ENST00000620203 90 ntBASIC3.53□□□□□ -1.84
BRPF3Q9ULD4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
BRPF3Q9ULD4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
BRPF3Q9ULD4 RNA5SP387-201ENST00000364226 106 ntBASIC3.52□□□□□ -1.85
BRPF3Q9ULD4 Y_RNA.332-201ENST00000365271 113 ntBASIC3.52□□□□□ -1.85
BRPF3Q9ULD4 Y_RNA.343-201ENST00000365354 112 ntBASIC3.52□□□□□ -1.85
BRPF3Q9ULD4 Y_RNA.488-201ENST00000384403 102 ntBASIC3.52□□□□□ -1.85
BRPF3Q9ULD4 MIR548I2-201ENST00000408348 149 ntBASIC3.52□□□□□ -1.85
BRPF3Q9ULD4 RNU2-48P-201ENST00000410694 191 ntBASIC3.52□□□□□ -1.85
BRPF3Q9ULD4 AC003685.2-201ENST00000422795 395 ntBASIC3.52□□□□□ -1.85
BRPF3Q9ULD4 RN7SL633P-201ENST00000488974 297 ntBASIC3.52□□□□□ -1.85
BRPF3Q9ULD4 AC107027.2-201ENST00000512197 115 ntBASIC3.52□□□□□ -1.85
BRPF3Q9ULD4 RNU1-104P-201ENST00000517280 175 ntBASIC3.52□□□□□ -1.85
BRPF3Q9ULD4 AC004486.1-201ENST00000546846 233 ntBASIC3.52□□□□□ -1.85
BRPF3Q9ULD4 AC009487.2-201ENST00000420969 6821 ntBASIC3.52□□□□□ -1.85
BRPF3Q9ULD4 AL035425.3-201ENST00000564206 4996 ntBASIC3.52□□□□□ -1.85
BRPF3Q9ULD4 CENPCP1-201ENST00000533085 2578 ntBASIC3.52□□□□□ -1.85
BRPF3Q9ULD4 AC073346.2-201ENST00000624724 2058 ntBASIC3.51□□□□□ -1.85
BRPF3Q9ULD4 RNU6-151P-201ENST00000364158 107 ntBASIC3.51□□□□□ -1.85
BRPF3Q9ULD4 Y_RNA.215-201ENST00000364204 112 ntBASIC3.51□□□□□ -1.85
BRPF3Q9ULD4 RNU6-117P-201ENST00000365415 107 ntBASIC3.51□□□□□ -1.85
BRPF3Q9ULD4 RNU6-1228P-201ENST00000391014 107 ntBASIC3.51□□□□□ -1.85
BRPF3Q9ULD4 AL606845.1-201ENST00000404881 255 ntBASIC3.51□□□□□ -1.85
BRPF3Q9ULD4 RNA5SP511-201ENST00000410487 115 ntBASIC3.51□□□□□ -1.85
BRPF3Q9ULD4 AC007064.1-201ENST00000412238 351 ntBASIC3.51□□□□□ -1.85
BRPF3Q9ULD4 AC025750.2-201ENST00000442609 450 ntBASIC3.51□□□□□ -1.85
BRPF3Q9ULD4 AL121914.1-201ENST00000450188 156 ntBASIC3.51□□□□□ -1.85
BRPF3Q9ULD4 RPL23AP54-201ENST00000495129 419 ntBASIC3.51□□□□□ -1.85
BRPF3Q9ULD4 SNORA4.4-201ENST00000515921 135 ntBASIC3.51□□□□□ -1.85
BRPF3Q9ULD4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.51□□□□□ -1.85
BRPF3Q9ULD4 AC107016.2-201ENST00000547968 190 ntBASIC3.51□□□□□ -1.85
BRPF3Q9ULD4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.51□□□□□ -1.85
BRPF3Q9ULD4 MIR5195-201ENST00000583555 115 ntBASIC3.51□□□□□ -1.85
BRPF3Q9ULD4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
BRPF3Q9ULD4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.5□□□□□ -1.85
BRPF3Q9ULD4 AC093010.3-201ENST00000570269 15214 ntBASIC3.5□□□□□ -1.85
BRPF3Q9ULD4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.5□□□□□ -1.85
BRPF3Q9ULD4 RNU4-13P-201ENST00000364019 141 ntBASIC3.5□□□□□ -1.85
BRPF3Q9ULD4 RNU6-818P-201ENST00000364837 108 ntBASIC3.5□□□□□ -1.85
BRPF3Q9ULD4 MIR561-201ENST00000385216 97 ntBASIC3.5□□□□□ -1.85
BRPF3Q9ULD4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.5□□□□□ -1.85
BRPF3Q9ULD4 AC015720.1-201ENST00000565251 277 ntBASIC3.5□□□□□ -1.85
BRPF3Q9ULD4 AC093732.2-201ENST00000607950 274 ntBASIC3.5□□□□□ -1.85
BRPF3Q9ULD4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.5□□□□□ -1.85
BRPF3Q9ULD4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRPF3Q9ULD4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRPF3Q9ULD4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
BRPF3Q9ULD4 RNU6-81P-201ENST00000365608 104 ntBASIC3.49□□□□□ -1.85
BRPF3Q9ULD4 Y_RNA.497-201ENST00000384447 98 ntBASIC3.49□□□□□ -1.85
BRPF3Q9ULD4 RNU6-131P-201ENST00000391144 107 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms