Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 RNU7-99P-201ENST00000516271 62 ntBASIC0.93□□□□□ -2.26
CTSFQ9UBX1 AP002001.1-203ENST00000534002 267 ntBASIC0.93□□□□□ -2.26
CTSFQ9UBX1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.93□□□□□ -2.26
CTSFQ9UBX1 AL137100.2-201ENST00000555786 315 ntBASIC0.93□□□□□ -2.26
CTSFQ9UBX1 MIR4790-201ENST00000577799 79 ntBASIC0.93□□□□□ -2.26
CTSFQ9UBX1 AL021879.1-201ENST00000611756 288 ntBASIC0.93□□□□□ -2.26
CTSFQ9UBX1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.93□□□□□ -2.26
CTSFQ9UBX1 AC068647.2-201ENST00000637380 353 ntBASIC0.93□□□□□ -2.26
CTSFQ9UBX1 MTND5P16-201ENST00000460269 1703 ntBASIC0.92□□□□□ -2.26
CTSFQ9UBX1 RNA5SP361-201ENST00000362686 118 ntBASIC0.92□□□□□ -2.26
CTSFQ9UBX1 Y_RNA.116-201ENST00000363292 103 ntBASIC0.92□□□□□ -2.26
CTSFQ9UBX1 RNU6-505P-201ENST00000384427 107 ntBASIC0.92□□□□□ -2.26
CTSFQ9UBX1 RNU6-1215P-201ENST00000384441 102 ntBASIC0.92□□□□□ -2.26
CTSFQ9UBX1 ELOCP21-201ENST00000412558 336 ntBASIC0.92□□□□□ -2.26
CTSFQ9UBX1 EIF1P2-201ENST00000428233 350 ntBASIC0.92□□□□□ -2.26
CTSFQ9UBX1 MTND4LP16-201ENST00000440828 295 ntBASIC0.92□□□□□ -2.26
CTSFQ9UBX1 MRPS10P1-201ENST00000448483 130 ntBASIC0.92□□□□□ -2.26
CTSFQ9UBX1 RPS29P1-201ENST00000465274 159 ntBASIC0.92□□□□□ -2.26
CTSFQ9UBX1 AC010469.2-201ENST00000496412 480 ntBASIC0.92□□□□□ -2.26
CTSFQ9UBX1 RNU6-1114P-201ENST00000516022 107 ntBASIC0.92□□□□□ -2.26
CTSFQ9UBX1 RNU6-113P-201ENST00000516653 101 ntBASIC0.92□□□□□ -2.26
CTSFQ9UBX1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.92□□□□□ -2.26
CTSFQ9UBX1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.92□□□□□ -2.26
CTSFQ9UBX1 AC093023.1-201ENST00000547375 507 ntBASIC0.92□□□□□ -2.26
CTSFQ9UBX1 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.92□□□□□ -2.26
CTSFQ9UBX1 MIR4438-201ENST00000585271 93 ntBASIC0.92□□□□□ -2.26
CTSFQ9UBX1 FAM106DP-201ENST00000586416 501 ntBASIC0.92□□□□□ -2.26
CTSFQ9UBX1 AC106754.2-201ENST00000623006 233 ntBASIC0.92□□□□□ -2.26
CTSFQ9UBX1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.92□□□□□ -2.26
CTSFQ9UBX1 AC018630.2-201ENST00000534866 2403 ntBASIC0.91□□□□□ -2.26
CTSFQ9UBX1 Y_RNA.86-201ENST00000363020 111 ntBASIC0.91□□□□□ -2.26
CTSFQ9UBX1 Y_RNA.184-201ENST00000363884 108 ntBASIC0.91□□□□□ -2.26
CTSFQ9UBX1 MIR329-1-201ENST00000385028 80 ntBASIC0.91□□□□□ -2.26
CTSFQ9UBX1 RNA5SP118-201ENST00000410385 109 ntBASIC0.91□□□□□ -2.26
CTSFQ9UBX1 RN7SKP200-201ENST00000410564 320 ntBASIC0.91□□□□□ -2.26
CTSFQ9UBX1 AC009161.1-201ENST00000417306 376 ntBASIC0.91□□□□□ -2.26
CTSFQ9UBX1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.91□□□□□ -2.26
CTSFQ9UBX1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.91□□□□□ -2.26
CTSFQ9UBX1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.91□□□□□ -2.26
CTSFQ9UBX1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.91□□□□□ -2.26
CTSFQ9UBX1 Y_RNA.670-201ENST00000516255 105 ntBASIC0.91□□□□□ -2.26
CTSFQ9UBX1 Y_RNA.683-201ENST00000516508 93 ntBASIC0.91□□□□□ -2.26
CTSFQ9UBX1 RNU6-107P-201ENST00000516643 102 ntBASIC0.91□□□□□ -2.26
CTSFQ9UBX1 RNU1-54P-201ENST00000517181 120 ntBASIC0.91□□□□□ -2.26
CTSFQ9UBX1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.91□□□□□ -2.26
CTSFQ9UBX1 AC004584.2-201ENST00000570407 410 ntBASIC0.91□□□□□ -2.26
CTSFQ9UBX1 MIR4778-201ENST00000577635 80 ntBASIC0.91□□□□□ -2.26
CTSFQ9UBX1 AC018462.2-201ENST00000605375 395 ntBASIC0.91□□□□□ -2.26
CTSFQ9UBX1 U4.5-201ENST00000617137 123 ntBASIC0.91□□□□□ -2.26
CTSFQ9UBX1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CTSFQ9UBX1 SNORA20B-201ENST00000384220 132 ntBASIC0.9□□□□□ -2.27
CTSFQ9UBX1 MIR548K-201ENST00000408406 116 ntBASIC0.9□□□□□ -2.27
CTSFQ9UBX1 MIR548F5-201ENST00000408421 86 ntBASIC0.9□□□□□ -2.27
CTSFQ9UBX1 Y_RNA.594-201ENST00000410373 140 ntBASIC0.9□□□□□ -2.27
CTSFQ9UBX1 POLR2J4-204ENST00000418424 324 ntBASIC0.9□□□□□ -2.27
CTSFQ9UBX1 USP9YP16-201ENST00000430287 407 ntBASIC0.9□□□□□ -2.27
CTSFQ9UBX1 USP9YP23-201ENST00000455085 407 ntBASIC0.9□□□□□ -2.27
CTSFQ9UBX1 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
CTSFQ9UBX1 RPS27P22-201ENST00000478056 241 ntBASIC0.9□□□□□ -2.27
CTSFQ9UBX1 AC018710.1-201ENST00000506509 158 ntBASIC0.9□□□□□ -2.27
CTSFQ9UBX1 AC018638.8-201ENST00000588755 281 ntBASIC0.9□□□□□ -2.27
CTSFQ9UBX1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.9□□□□□ -2.27
CTSFQ9UBX1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
CTSFQ9UBX1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.9□□□□□ -2.27
CTSFQ9UBX1 MIR373-201ENST00000362273 69 ntBASIC0.89□□□□□ -2.27
CTSFQ9UBX1 RNU6-1266P-201ENST00000362794 105 ntBASIC0.89□□□□□ -2.27
CTSFQ9UBX1 Y_RNA.269-201ENST00000364685 89 ntBASIC0.89□□□□□ -2.27
CTSFQ9UBX1 RNU6-1013P-201ENST00000384180 107 ntBASIC0.89□□□□□ -2.27
CTSFQ9UBX1 Y_RNA.557-201ENST00000384680 107 ntBASIC0.89□□□□□ -2.27
CTSFQ9UBX1 USMG5P1-201ENST00000425964 177 ntBASIC0.89□□□□□ -2.27
CTSFQ9UBX1 CALM2P4-201ENST00000430810 426 ntBASIC0.89□□□□□ -2.27
CTSFQ9UBX1 AL353997.1-201ENST00000432936 108 ntBASIC0.89□□□□□ -2.27
CTSFQ9UBX1 STAG3L5P-204ENST00000443759 179 ntBASIC0.89□□□□□ -2.27
CTSFQ9UBX1 RPL39P38-201ENST00000467018 153 ntBASIC0.89□□□□□ -2.27
CTSFQ9UBX1 AC097462.1-201ENST00000514125 324 ntBASIC0.89□□□□□ -2.27
CTSFQ9UBX1 AC046134.1-201ENST00000514454 666 ntBASIC0.89□□□□□ -2.27
CTSFQ9UBX1 Y_RNA.706-201ENST00000516933 99 ntBASIC0.89□□□□□ -2.27
CTSFQ9UBX1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.89□□□□□ -2.27
CTSFQ9UBX1 AC100812.1-201ENST00000607622 580 ntBASIC0.89□□□□□ -2.27
CTSFQ9UBX1 AC007014.2-201ENST00000615581 479 ntBASIC0.89□□□□□ -2.27
CTSFQ9UBX1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.89□□□□□ -2.27
CTSFQ9UBX1 SNORD3E-202ENST00000627253 216 ntBASIC0.89□□□□□ -2.27
CTSFQ9UBX1 RNU6-454P-201ENST00000364292 107 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 Y_RNA.339-201ENST00000365325 102 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 Y_RNA.404-201ENST00000383978 102 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 RNU6-1145P-201ENST00000384246 107 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 Y_RNA.490-201ENST00000384413 102 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 Y_RNA.573-201ENST00000384763 105 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 MIR190B-201ENST00000401119 79 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 RNU6-1050P-201ENST00000410388 107 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 RPS3AP52-201ENST00000435639 297 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 AC091021.1-201ENST00000468051 388 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 RPL7P42-201ENST00000481005 679 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 AC010598.1-201ENST00000510378 103 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 RNU6-922P-201ENST00000516753 99 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 AC105029.1-201ENST00000520250 669 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 APOOP3-201ENST00000536787 586 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.88□□□□□ -2.27
CTSFQ9UBX1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms