Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RNU6-65P-201ENST00000516332 98 ntBASIC3.75□□□□□ -1.81
CUEDC1Q9NWM3 AC141557.1-201ENST00000540982 400 ntBASIC3.75□□□□□ -1.81
CUEDC1Q9NWM3 AC011604.1-201ENST00000545978 196 ntBASIC3.75□□□□□ -1.81
CUEDC1Q9NWM3 U6.73-201ENST00000619194 103 ntBASIC3.75□□□□□ -1.81
CUEDC1Q9NWM3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CUEDC1Q9NWM3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CUEDC1Q9NWM3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
CUEDC1Q9NWM3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CUEDC1Q9NWM3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.74□□□□□ -1.81
CUEDC1Q9NWM3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CUEDC1Q9NWM3 RNA5SP124-201ENST00000362739 110 ntBASIC3.74□□□□□ -1.81
CUEDC1Q9NWM3 RNU6-1124P-201ENST00000384169 107 ntBASIC3.74□□□□□ -1.81
CUEDC1Q9NWM3 RPS12P18-201ENST00000442381 270 ntBASIC3.74□□□□□ -1.81
CUEDC1Q9NWM3 RPS27P22-201ENST00000478056 241 ntBASIC3.74□□□□□ -1.81
CUEDC1Q9NWM3 CKS1BP2-201ENST00000497342 240 ntBASIC3.74□□□□□ -1.81
CUEDC1Q9NWM3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.74□□□□□ -1.81
CUEDC1Q9NWM3 RNU6-948P-201ENST00000516374 107 ntBASIC3.74□□□□□ -1.81
CUEDC1Q9NWM3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.74□□□□□ -1.81
CUEDC1Q9NWM3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CUEDC1Q9NWM3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CUEDC1Q9NWM3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CUEDC1Q9NWM3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 SNORD61-201ENST00000384252 73 ntBASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 Z92545.1-201ENST00000411782 234 ntBASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 EIF4EP4-201ENST00000424916 578 ntBASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 AC023141.11-201ENST00000508864 202 ntBASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 MIR5195-201ENST00000583555 115 ntBASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 AC090517.3-201ENST00000625170 141 ntBASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 IPO8P1-201ENST00000455509 3109 ntBASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
CUEDC1Q9NWM3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 RNU1-22P-201ENST00000363334 158 ntBASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 Y_RNA.242-201ENST00000364473 110 ntBASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 RNA5SP97-201ENST00000365006 84 ntBASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 Y_RNA.466-201ENST00000384294 113 ntBASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 RNU6-1235P-201ENST00000384559 107 ntBASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 MICF-203ENST00000432679 129 ntBASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 RNU6-893P-201ENST00000458841 100 ntBASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 RNU6-498P-201ENST00000459468 107 ntBASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 RN7SL323P-201ENST00000494712 295 ntBASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 AC096725.1-201ENST00000514266 313 ntBASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 CYCSP30-201ENST00000546447 172 ntBASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 MIR3186-201ENST00000577404 85 ntBASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 AC080128.1-201ENST00000474389 1917 ntBASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CUEDC1Q9NWM3 RNU6-1240P-201ENST00000365155 104 ntBASIC3.71□□□□□ -1.82
CUEDC1Q9NWM3 MIR199A2-201ENST00000385289 110 ntBASIC3.71□□□□□ -1.82
CUEDC1Q9NWM3 Y_RNA.593-201ENST00000410292 98 ntBASIC3.71□□□□□ -1.82
CUEDC1Q9NWM3 RNA5SP225-201ENST00000410874 135 ntBASIC3.71□□□□□ -1.82
CUEDC1Q9NWM3 RNU6-1328P-201ENST00000410938 106 ntBASIC3.71□□□□□ -1.82
CUEDC1Q9NWM3 RNU6-240P-201ENST00000516098 97 ntBASIC3.71□□□□□ -1.82
CUEDC1Q9NWM3 RNU1-95P-201ENST00000516357 160 ntBASIC3.71□□□□□ -1.82
CUEDC1Q9NWM3 RNY4P20-201ENST00000516678 93 ntBASIC3.71□□□□□ -1.82
CUEDC1Q9NWM3 RNU1-128P-201ENST00000516704 160 ntBASIC3.71□□□□□ -1.82
CUEDC1Q9NWM3 RN7SKP282-201ENST00000516824 299 ntBASIC3.71□□□□□ -1.82
CUEDC1Q9NWM3 SCARNA14-201ENST00000516903 136 ntBASIC3.71□□□□□ -1.82
CUEDC1Q9NWM3 AC022695.1-201ENST00000522089 237 ntBASIC3.71□□□□□ -1.82
CUEDC1Q9NWM3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.71□□□□□ -1.82
CUEDC1Q9NWM3 U7.8-201ENST00000619968 63 ntBASIC3.71□□□□□ -1.82
CUEDC1Q9NWM3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CUEDC1Q9NWM3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.71□□□□□ -1.82
CUEDC1Q9NWM3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.71□□□□□ -1.82
CUEDC1Q9NWM3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
CUEDC1Q9NWM3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.7□□□□□ -1.82
CUEDC1Q9NWM3 RNU6-283P-201ENST00000364788 107 ntBASIC3.7□□□□□ -1.82
CUEDC1Q9NWM3 SNORD31B-201ENST00000364977 69 ntBASIC3.7□□□□□ -1.82
CUEDC1Q9NWM3 MIR30B-201ENST00000384850 88 ntBASIC3.7□□□□□ -1.82
CUEDC1Q9NWM3 SNORD77.3-201ENST00000391113 65 ntBASIC3.7□□□□□ -1.82
CUEDC1Q9NWM3 MIR1294-201ENST00000408503 142 ntBASIC3.7□□□□□ -1.82
CUEDC1Q9NWM3 RN7SKP156-201ENST00000410308 342 ntBASIC3.7□□□□□ -1.82
CUEDC1Q9NWM3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.7□□□□□ -1.82
CUEDC1Q9NWM3 RPS29P21-201ENST00000496272 170 ntBASIC3.7□□□□□ -1.82
CUEDC1Q9NWM3 MRPS17P9-201ENST00000511924 393 ntBASIC3.7□□□□□ -1.82
CUEDC1Q9NWM3 AC097462.1-201ENST00000514125 324 ntBASIC3.7□□□□□ -1.82
CUEDC1Q9NWM3 RNA5SP208-201ENST00000516156 78 ntBASIC3.7□□□□□ -1.82
CUEDC1Q9NWM3 RNU6-830P-201ENST00000516353 107 ntBASIC3.7□□□□□ -1.82
CUEDC1Q9NWM3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.7□□□□□ -1.82
CUEDC1Q9NWM3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CUEDC1Q9NWM3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CUEDC1Q9NWM3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CUEDC1Q9NWM3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CUEDC1Q9NWM3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CUEDC1Q9NWM3 Y_RNA.17-201ENST00000362433 111 ntBASIC3.69□□□□□ -1.82
CUEDC1Q9NWM3 RNU4-36P-201ENST00000364294 144 ntBASIC3.69□□□□□ -1.82
CUEDC1Q9NWM3 SNORA63D-201ENST00000364359 132 ntBASIC3.69□□□□□ -1.82
CUEDC1Q9NWM3 Z96811.1-201ENST00000445880 108 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms