Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC091925.1-201ENST00000623204 462 ntBASIC1.95□□□□□ -2.1
SMC4Q9NTJ3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.94□□□□□ -2.1
SMC4Q9NTJ3 MIR369-201ENST00000362155 70 ntBASIC1.94□□□□□ -2.1
SMC4Q9NTJ3 MIR424-201ENST00000362227 98 ntBASIC1.94□□□□□ -2.1
SMC4Q9NTJ3 Y_RNA.813-201ENST00000364639 102 ntBASIC1.94□□□□□ -2.1
SMC4Q9NTJ3 RNU6-417P-201ENST00000384712 107 ntBASIC1.94□□□□□ -2.1
SMC4Q9NTJ3 MIR1304-201ENST00000408243 91 ntBASIC1.94□□□□□ -2.1
SMC4Q9NTJ3 MTND4P28-201ENST00000426217 387 ntBASIC1.94□□□□□ -2.1
SMC4Q9NTJ3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.94□□□□□ -2.1
SMC4Q9NTJ3 AL645939.4-201ENST00000604495 135 ntBASIC1.94□□□□□ -2.1
SMC4Q9NTJ3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.94□□□□□ -2.1
SMC4Q9NTJ3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SMC4Q9NTJ3 RNU6-1266P-201ENST00000362794 105 ntBASIC1.93□□□□□ -2.1
SMC4Q9NTJ3 Y_RNA.61-201ENST00000362835 102 ntBASIC1.93□□□□□ -2.1
SMC4Q9NTJ3 RNU6-414P-201ENST00000363705 104 ntBASIC1.93□□□□□ -2.1
SMC4Q9NTJ3 RNU6-926P-201ENST00000384075 107 ntBASIC1.93□□□□□ -2.1
SMC4Q9NTJ3 MIR320A-201ENST00000385302 82 ntBASIC1.93□□□□□ -2.1
SMC4Q9NTJ3 SNORD12B-201ENST00000410433 91 ntBASIC1.93□□□□□ -2.1
SMC4Q9NTJ3 Y_RNA.605-201ENST00000410577 105 ntBASIC1.93□□□□□ -2.1
SMC4Q9NTJ3 Y_RNA.661-201ENST00000516003 99 ntBASIC1.93□□□□□ -2.1
SMC4Q9NTJ3 RN7SKP49-201ENST00000516675 260 ntBASIC1.93□□□□□ -2.1
SMC4Q9NTJ3 AL080274.1-201ENST00000605565 220 ntBASIC1.93□□□□□ -2.1
SMC4Q9NTJ3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.93□□□□□ -2.1
SMC4Q9NTJ3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 Y_RNA.31-201ENST00000362574 102 ntBASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 RNU6-961P-201ENST00000363893 105 ntBASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 RNU6-338P-201ENST00000383888 105 ntBASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 MIR517C-201ENST00000385103 95 ntBASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 RNA5SP467-201ENST00000391274 118 ntBASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 JTBP1-201ENST00000441314 247 ntBASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 UQCRBP2-201ENST00000447827 297 ntBASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 PCNPP5-201ENST00000452246 481 ntBASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 SNORA40.9-201ENST00000515895 93 ntBASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 AC018448.1-201ENST00000552843 316 ntBASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 AC015720.1-201ENST00000565251 277 ntBASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 AC055872.1-201ENST00000570978 278 ntBASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 MIR4303-201ENST00000581299 66 ntBASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 AC092447.9-201ENST00000603395 144 ntBASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 AC006435.5-201ENST00000624486 112 ntBASIC1.92□□□□□ -2.1
SMC4Q9NTJ3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 Y_RNA.197-201ENST00000364004 102 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 RNU4-13P-201ENST00000364019 141 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 RNU1-42P-201ENST00000364033 160 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 RNU6-60P-201ENST00000364792 103 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 RNU6-308P-201ENST00000390957 107 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 SNORA67.6-201ENST00000391093 99 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 SNORA17.3-201ENST00000391159 129 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 MIR1267-201ENST00000408723 78 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 AC018865.2-201ENST00000423631 129 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 RPS26P45-201ENST00000471748 340 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 AC010469.2-201ENST00000496412 480 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 AC074133.1-201ENST00000515696 183 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 RNU4-77P-201ENST00000516692 156 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 RNU7-4P-201ENST00000516961 62 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 SNORD116.3-201ENST00000517176 78 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 MIR2355-201ENST00000517199 87 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 AL359075.3-201ENST00000613288 217 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 AC011476.5-201ENST00000615594 130 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 AC007485.1-201ENST00000616755 206 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 U2.1-201ENST00000618978 145 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 uc_338.22-201ENST00000622722 187 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 MIR4272-201ENST00000635924 64 ntBASIC1.91□□□□□ -2.1
SMC4Q9NTJ3 MIR378A-201ENST00000362177 66 ntBASIC1.9□□□□□ -2.11
SMC4Q9NTJ3 RNU6-454P-201ENST00000364292 107 ntBASIC1.9□□□□□ -2.11
SMC4Q9NTJ3 SNORD42.2-201ENST00000365570 69 ntBASIC1.9□□□□□ -2.11
SMC4Q9NTJ3 Y_RNA.428-201ENST00000384078 102 ntBASIC1.9□□□□□ -2.11
SMC4Q9NTJ3 AL354695.1-201ENST00000427935 228 ntBASIC1.9□□□□□ -2.11
SMC4Q9NTJ3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
SMC4Q9NTJ3 AC099799.1-201ENST00000439809 192 ntBASIC1.9□□□□□ -2.11
SMC4Q9NTJ3 snoU13.27-201ENST00000459278 104 ntBASIC1.9□□□□□ -2.11
SMC4Q9NTJ3 AC023790.1-201ENST00000482174 347 ntBASIC1.9□□□□□ -2.11
SMC4Q9NTJ3 RNU6-408P-201ENST00000515910 100 ntBASIC1.9□□□□□ -2.11
SMC4Q9NTJ3 AC144568.1-201ENST00000520139 137 ntBASIC1.9□□□□□ -2.11
SMC4Q9NTJ3 AL442163.3-201ENST00000554110 156 ntBASIC1.9□□□□□ -2.11
SMC4Q9NTJ3 AL137100.2-201ENST00000555786 315 ntBASIC1.9□□□□□ -2.11
SMC4Q9NTJ3 SNORA77B-201ENST00000578179 125 ntBASIC1.9□□□□□ -2.11
SMC4Q9NTJ3 MIR3684-201ENST00000579779 74 ntBASIC1.9□□□□□ -2.11
SMC4Q9NTJ3 AC016925.2-201ENST00000605108 242 ntBASIC1.9□□□□□ -2.11
SMC4Q9NTJ3 SNORD58B-201ENST00000607313 66 ntBASIC1.9□□□□□ -2.11
SMC4Q9NTJ3 AP000648.3-201ENST00000623539 4507 ntBASIC1.9□□□□□ -2.11
SMC4Q9NTJ3 RNU6-457P-201ENST00000363999 107 ntBASIC1.89□□□□□ -2.11
SMC4Q9NTJ3 Y_RNA.252-201ENST00000364556 101 ntBASIC1.89□□□□□ -2.11
SMC4Q9NTJ3 RNU6-1264P-201ENST00000383891 107 ntBASIC1.89□□□□□ -2.11
SMC4Q9NTJ3 RNY1P14-201ENST00000384426 108 ntBASIC1.89□□□□□ -2.11
SMC4Q9NTJ3 Y_RNA.498-201ENST00000384460 102 ntBASIC1.89□□□□□ -2.11
SMC4Q9NTJ3 Y_RNA.535-201ENST00000384612 99 ntBASIC1.89□□□□□ -2.11
SMC4Q9NTJ3 AL137792.2-201ENST00000443484 235 ntBASIC1.89□□□□□ -2.11
SMC4Q9NTJ3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.89□□□□□ -2.11
SMC4Q9NTJ3 snoU13.9-201ENST00000458927 103 ntBASIC1.89□□□□□ -2.11
SMC4Q9NTJ3 SNORD65B-201ENST00000459126 73 ntBASIC1.89□□□□□ -2.11
SMC4Q9NTJ3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.89□□□□□ -2.11
SMC4Q9NTJ3 RNU6-970P-201ENST00000516312 107 ntBASIC1.89□□□□□ -2.11
SMC4Q9NTJ3 RNU1-142P-201ENST00000516682 145 ntBASIC1.89□□□□□ -2.11
SMC4Q9NTJ3 AC027419.1-201ENST00000522976 328 ntBASIC1.89□□□□□ -2.11
SMC4Q9NTJ3 AC006600.1-201ENST00000572529 153 ntBASIC1.89□□□□□ -2.11
SMC4Q9NTJ3 snoU13.31-201ENST00000607291 104 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms