Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PDLIM7Q9NR12 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
PDLIM7Q9NR12 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PDLIM7Q9NR12 RNU4-11P-201ENST00000365287 132 ntBASIC3.12□□□□□ -1.91
PDLIM7Q9NR12 SNORA22C-201ENST00000384614 134 ntBASIC3.12□□□□□ -1.91
PDLIM7Q9NR12 MIR512-1-201ENST00000384913 84 ntBASIC3.12□□□□□ -1.91
PDLIM7Q9NR12 MIR616-201ENST00000385293 97 ntBASIC3.12□□□□□ -1.91
PDLIM7Q9NR12 HSPE1P21-201ENST00000438283 308 ntBASIC3.12□□□□□ -1.91
PDLIM7Q9NR12 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.12□□□□□ -1.91
PDLIM7Q9NR12 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.12□□□□□ -1.91
PDLIM7Q9NR12 AC010409.1-201ENST00000487382 476 ntBASIC3.12□□□□□ -1.91
PDLIM7Q9NR12 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PDLIM7Q9NR12 RNU6-313P-201ENST00000516317 112 ntBASIC3.12□□□□□ -1.91
PDLIM7Q9NR12 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.12□□□□□ -1.91
PDLIM7Q9NR12 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.12□□□□□ -1.91
PDLIM7Q9NR12 AL365222.1-201ENST00000614661 98 ntBASIC3.12□□□□□ -1.91
PDLIM7Q9NR12 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.12□□□□□ -1.91
PDLIM7Q9NR12 MIR3658-201ENST00000636291 56 ntBASIC3.12□□□□□ -1.91
PDLIM7Q9NR12 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PDLIM7Q9NR12 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PDLIM7Q9NR12 U8.7-201ENST00000364940 136 ntBASIC3.11□□□□□ -1.91
PDLIM7Q9NR12 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PDLIM7Q9NR12 MT-TT-201ENST00000387460 66 ntBASIC3.11□□□□□ -1.91
PDLIM7Q9NR12 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.11□□□□□ -1.91
PDLIM7Q9NR12 RNU7-14P-201ENST00000459331 62 ntBASIC3.11□□□□□ -1.91
PDLIM7Q9NR12 SNORA25.12-201ENST00000516202 82 ntBASIC3.11□□□□□ -1.91
PDLIM7Q9NR12 RNA5SP148-201ENST00000516527 94 ntBASIC3.11□□□□□ -1.91
PDLIM7Q9NR12 SCARNA3-201ENST00000517097 143 ntBASIC3.11□□□□□ -1.91
PDLIM7Q9NR12 DNAJC19P2-201ENST00000593340 302 ntBASIC3.11□□□□□ -1.91
PDLIM7Q9NR12 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PDLIM7Q9NR12 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.11□□□□□ -1.91
PDLIM7Q9NR12 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.11□□□□□ -1.91
PDLIM7Q9NR12 AC010332.2-201ENST00000613083 1904 ntBASIC3.11□□□□□ -1.91
PDLIM7Q9NR12 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
PDLIM7Q9NR12 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 U8.2-201ENST00000363156 134 ntBASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 SNORD50B-201ENST00000364995 70 ntBASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 SNORD14D-201ENST00000384390 87 ntBASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 RNU6-1168P-201ENST00000390831 104 ntBASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 AL355796.1-201ENST00000406706 323 ntBASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 SNORA3.2-201ENST00000408221 125 ntBASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 MIR1283-1-201ENST00000408494 87 ntBASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 RNU6-735P-201ENST00000410612 107 ntBASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 RNA5SP21-201ENST00000410917 96 ntBASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 AL121914.1-201ENST00000450188 156 ntBASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 AL137159.1-201ENST00000452808 512 ntBASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 RNU7-57P-201ENST00000459540 60 ntBASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 AC117454.1-201ENST00000491120 168 ntBASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 MIR4724-201ENST00000579485 89 ntBASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 AC068647.2-201ENST00000637380 353 ntBASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PDLIM7Q9NR12 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PDLIM7Q9NR12 Y_RNA.229-201ENST00000364347 113 ntBASIC3.09□□□□□ -1.91
PDLIM7Q9NR12 RNU6-1180P-201ENST00000364935 107 ntBASIC3.09□□□□□ -1.91
PDLIM7Q9NR12 MIR1294-201ENST00000408503 142 ntBASIC3.09□□□□□ -1.91
PDLIM7Q9NR12 U6atac.2-201ENST00000408644 118 ntBASIC3.09□□□□□ -1.91
PDLIM7Q9NR12 RNU6-383P-201ENST00000410864 94 ntBASIC3.09□□□□□ -1.91
PDLIM7Q9NR12 AC006461.1-201ENST00000412637 326 ntBASIC3.09□□□□□ -1.91
PDLIM7Q9NR12 AC104332.2-201ENST00000429959 156 ntBASIC3.09□□□□□ -1.91
PDLIM7Q9NR12 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.09□□□□□ -1.91
PDLIM7Q9NR12 RPL23AP7-203ENST00000449021 469 ntBASIC3.09□□□□□ -1.91
PDLIM7Q9NR12 AP004217.1-201ENST00000480579 346 ntBASIC3.09□□□□□ -1.91
PDLIM7Q9NR12 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.09□□□□□ -1.91
PDLIM7Q9NR12 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.09□□□□□ -1.91
PDLIM7Q9NR12 AL391903.3-201ENST00000612158 163 ntBASIC3.09□□□□□ -1.91
PDLIM7Q9NR12 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.09□□□□□ -1.91
PDLIM7Q9NR12 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PDLIM7Q9NR12 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 AC093010.3-201ENST00000570269 15214 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 MIR367-201ENST00000362299 68 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 RNU6-944P-201ENST00000364023 107 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 RNU6-144P-201ENST00000383951 107 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 SNORA20B-201ENST00000384220 132 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 RNU6-1274P-201ENST00000384557 107 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 SNORA20-201ENST00000384662 132 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 RNU6-376P-201ENST00000384731 106 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 SNORA40-201ENST00000388090 126 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 MIR873-201ENST00000401120 77 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 MIR300-201ENST00000401138 83 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 MIR513C-201ENST00000401352 84 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 RPL30P13-201ENST00000418873 348 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 snoU13.15-201ENST00000459407 104 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 AC080013.2-201ENST00000460866 323 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 RNU6-561P-201ENST00000516222 102 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 RNU6-1337P-201ENST00000516525 95 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 MIR5688-201ENST00000580619 83 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 MIR3199-1-201ENST00000582434 88 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms